BLASTX nr result

ID: Panax21_contig00016541 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00016541
         (973 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003533271.1| PREDICTED: LOW QUALITY PROTEIN: acyl-CoA deh...   429   e-118
ref|NP_187337.2| acyl-CoA dehydrogenase [Arabidopsis thaliana] g...   421   e-115
dbj|BAF01758.1| putative acetyl-coA dehydrogenase [Arabidopsis t...   421   e-115
dbj|BAD43785.1| unnamed protein product [Arabidopsis thaliana]        419   e-115
ref|XP_003547389.1| PREDICTED: acyl-CoA dehydrogenase family mem...   418   e-115

>ref|XP_003533271.1| PREDICTED: LOW QUALITY PROTEIN: acyl-CoA dehydrogenase family
           member 10-like [Glycine max]
          Length = 823

 Score =  429 bits (1102), Expect = e-118
 Identities = 211/281 (75%), Positives = 235/281 (83%), Gaps = 10/281 (3%)
 Frame = +3

Query: 159 MAIRTSD----FNV------DVLIRYCSEHVQGFPSVHAKFTVSQFGHGQSNPTYLLEVS 308
           MA  T+D    FNV      D L+RYCS HV GFP     FTVSQFGHGQSNPTYLLEV 
Sbjct: 1   MARNTADLATNFNVAHHFPHDSLLRYCSSHVSGFPHPPTHFTVSQFGHGQSNPTYLLEVG 60

Query: 309 SGGSSVKRYVLRKKPPGKLLQSAHAVEREFQVLNALGTYTLVPVPKVFCLCTDSSVIGTP 488
           S GS VKRYVLRKKPPGKLL SAHAV+REFQVL+ALGT+T VPVPKVFCLC D +VIGT 
Sbjct: 61  SYGSVVKRYVLRKKPPGKLLASAHAVDREFQVLHALGTHTKVPVPKVFCLCNDPTVIGTA 120

Query: 489 FYIMEYLEGRIFLDPKLPGLSPNRRRAVYRATAKALASLHSADIDAIGLGNYGRQDNYCK 668
           FYIMEYLEGRIFLDPKLPG++  +RRA+YRATAKALASLHSA++D+IGLGNYGR+++YCK
Sbjct: 121 FYIMEYLEGRIFLDPKLPGVTSQKRRAIYRATAKALASLHSANVDSIGLGNYGRRNDYCK 180

Query: 669 RQVERWAKQYLASTSEGKSGRNPKMLELIDWLRQHIPAEDTSTTTAGLVHGDFRIDNVVF 848
           RQ+ERWAKQY+ASTSEGK   NPKM  LIDWLR  IP ED+S  T GLVHGDFRIDN+VF
Sbjct: 181 RQIERWAKQYVASTSEGKPASNPKMFALIDWLRNQIPPEDSSGATGGLVHGDFRIDNLVF 240

Query: 849 HPIEDKVIGILDWELSTLGNQMCDVAYSCLHYLVDIDLDKV 971
           HP ED+VIGILDWELSTLGNQMCDVAYSC+ Y+ DI  +KV
Sbjct: 241 HPTEDRVIGILDWELSTLGNQMCDVAYSCMPYIADIGPEKV 281


>ref|NP_187337.2| acyl-CoA dehydrogenase [Arabidopsis thaliana]
           gi|20259431|gb|AAM14036.1| unknown protein [Arabidopsis
           thaliana] gi|26983892|gb|AAN86198.1| unknown protein
           [Arabidopsis thaliana] gi|332640940|gb|AEE74461.1|
           acyl-CoA dehydrogenase [Arabidopsis thaliana]
          Length = 824

 Score =  421 bits (1083), Expect = e-115
 Identities = 197/263 (74%), Positives = 234/263 (88%)
 Frame = +3

Query: 180 FNVDVLIRYCSEHVQGFPSVHAKFTVSQFGHGQSNPTYLLEVSSGGSSVKRYVLRKKPPG 359
           F+ D L R+ +++V GFP+  ++F VSQFGHGQSNPT+L+EV SG SS+KRYVLRKKPPG
Sbjct: 18  FDHDALFRFAADNVSGFPTNPSQFKVSQFGHGQSNPTFLIEVGSG-SSLKRYVLRKKPPG 76

Query: 360 KLLQSAHAVEREFQVLNALGTYTLVPVPKVFCLCTDSSVIGTPFYIMEYLEGRIFLDPKL 539
           KLLQSAHAV+REFQVL ALG +T VPVPKVFCLCTD +VIGT FYIME++EGRIF+DPKL
Sbjct: 77  KLLQSAHAVDREFQVLRALGEHTQVPVPKVFCLCTDPAVIGTAFYIMEFMEGRIFIDPKL 136

Query: 540 PGLSPNRRRAVYRATAKALASLHSADIDAIGLGNYGRQDNYCKRQVERWAKQYLASTSEG 719
           P ++P RR A+YRATAKALASLHSAD+DAIGL  YGR+ NYCKRQ++RW KQYLASTSEG
Sbjct: 137 PNVAPERRNAIYRATAKALASLHSADVDAIGLEKYGRRGNYCKRQIDRWFKQYLASTSEG 196

Query: 720 KSGRNPKMLELIDWLRQHIPAEDTSTTTAGLVHGDFRIDNVVFHPIEDKVIGILDWELST 899
           K  RNPKM EL+DWLR++IPAED++  T+GLVHGDFRIDN+VFHP ED+VIGI+DWELST
Sbjct: 197 KPERNPKMFELVDWLRKNIPAEDSTGATSGLVHGDFRIDNLVFHPSEDRVIGIIDWELST 256

Query: 900 LGNQMCDVAYSCLHYLVDIDLDK 968
           LGNQMCDVAYSC+HY+V++ LDK
Sbjct: 257 LGNQMCDVAYSCMHYIVNVQLDK 279


>dbj|BAF01758.1| putative acetyl-coA dehydrogenase [Arabidopsis thaliana]
          Length = 824

 Score =  421 bits (1083), Expect = e-115
 Identities = 197/263 (74%), Positives = 234/263 (88%)
 Frame = +3

Query: 180 FNVDVLIRYCSEHVQGFPSVHAKFTVSQFGHGQSNPTYLLEVSSGGSSVKRYVLRKKPPG 359
           F+ D L R+ +++V GFP+  ++F VSQFGHGQSNPT+L+EV SG SS+KRYVLRKKPPG
Sbjct: 18  FDHDALFRFAADNVSGFPTNPSQFKVSQFGHGQSNPTFLIEVGSG-SSLKRYVLRKKPPG 76

Query: 360 KLLQSAHAVEREFQVLNALGTYTLVPVPKVFCLCTDSSVIGTPFYIMEYLEGRIFLDPKL 539
           KLLQSAHAV+REFQVL ALG +T VPVPKVFCLCTD +VIGT FYIME++EGRIF+DPKL
Sbjct: 77  KLLQSAHAVDREFQVLRALGEHTQVPVPKVFCLCTDPAVIGTAFYIMEFMEGRIFIDPKL 136

Query: 540 PGLSPNRRRAVYRATAKALASLHSADIDAIGLGNYGRQDNYCKRQVERWAKQYLASTSEG 719
           P ++P RR A+YRATAKALASLHSAD+DAIGL  YGR+ NYCKRQ++RW KQYLASTSEG
Sbjct: 137 PNVAPERRNAIYRATAKALASLHSADVDAIGLEKYGRRGNYCKRQIDRWFKQYLASTSEG 196

Query: 720 KSGRNPKMLELIDWLRQHIPAEDTSTTTAGLVHGDFRIDNVVFHPIEDKVIGILDWELST 899
           K  RNPKM EL+DWLR++IPAED++  T+GLVHGDFRIDN+VFHP ED+VIGI+DWELST
Sbjct: 197 KPERNPKMFELVDWLRKNIPAEDSTGATSGLVHGDFRIDNLVFHPSEDRVIGIIDWELST 256

Query: 900 LGNQMCDVAYSCLHYLVDIDLDK 968
           LGNQMCDVAYSC+HY+V++ LDK
Sbjct: 257 LGNQMCDVAYSCMHYIVNVQLDK 279


>dbj|BAD43785.1| unnamed protein product [Arabidopsis thaliana]
          Length = 824

 Score =  419 bits (1076), Expect = e-115
 Identities = 196/263 (74%), Positives = 233/263 (88%)
 Frame = +3

Query: 180 FNVDVLIRYCSEHVQGFPSVHAKFTVSQFGHGQSNPTYLLEVSSGGSSVKRYVLRKKPPG 359
           F+ D L R+ +++V GFP+  ++F VSQFGHGQSNPT+L+EV SG SS+KRYVLRKKPPG
Sbjct: 18  FDHDALFRFAADNVSGFPTNPSQFKVSQFGHGQSNPTFLIEVGSG-SSLKRYVLRKKPPG 76

Query: 360 KLLQSAHAVEREFQVLNALGTYTLVPVPKVFCLCTDSSVIGTPFYIMEYLEGRIFLDPKL 539
           KLLQSAHAV+REFQVL ALG +T VPVPKVFCLCTD +VIGT FYIME++EGRIF+DPKL
Sbjct: 77  KLLQSAHAVDREFQVLRALGEHTQVPVPKVFCLCTDPAVIGTAFYIMEFMEGRIFIDPKL 136

Query: 540 PGLSPNRRRAVYRATAKALASLHSADIDAIGLGNYGRQDNYCKRQVERWAKQYLASTSEG 719
           P ++P RR A+YRATAKALASLHSAD+DAIGL  YGR+ NYCKRQ++RW KQYLASTSEG
Sbjct: 137 PNVAPERRNAIYRATAKALASLHSADVDAIGLEKYGRRGNYCKRQIDRWFKQYLASTSEG 196

Query: 720 KSGRNPKMLELIDWLRQHIPAEDTSTTTAGLVHGDFRIDNVVFHPIEDKVIGILDWELST 899
           K  RNPKM EL+DWLR++IPAED++  T+GLVHGDFRIDN+VFHP ED+ IGI+DWELST
Sbjct: 197 KPERNPKMFELVDWLRKNIPAEDSTGATSGLVHGDFRIDNLVFHPSEDRDIGIIDWELST 256

Query: 900 LGNQMCDVAYSCLHYLVDIDLDK 968
           LGNQMCDVAYSC+HY+V++ LDK
Sbjct: 257 LGNQMCDVAYSCMHYIVNVQLDK 279


>ref|XP_003547389.1| PREDICTED: acyl-CoA dehydrogenase family member 10-like [Glycine
           max]
          Length = 780

 Score =  418 bits (1075), Expect = e-115
 Identities = 200/264 (75%), Positives = 222/264 (84%)
 Frame = +3

Query: 180 FNVDVLIRYCSEHVQGFPSVHAKFTVSQFGHGQSNPTYLLEVSSGGSSVKRYVLRKKPPG 359
           F  D L+RYCS HV GFP     FTVSQFGHGQSNPTYLL+V S GS VK YVLRKKPPG
Sbjct: 18  FPHDSLLRYCSSHVSGFPHPPTHFTVSQFGHGQSNPTYLLKVGSHGSLVKHYVLRKKPPG 77

Query: 360 KLLQSAHAVEREFQVLNALGTYTLVPVPKVFCLCTDSSVIGTPFYIMEYLEGRIFLDPKL 539
            LL SAHAV+REFQVL ALG +T VPVPKVFCLC D +VIGT FYIMEYLEGRIF+DPKL
Sbjct: 78  TLLASAHAVDREFQVLQALGAHTKVPVPKVFCLCNDPTVIGTAFYIMEYLEGRIFIDPKL 137

Query: 540 PGLSPNRRRAVYRATAKALASLHSADIDAIGLGNYGRQDNYCKRQVERWAKQYLASTSEG 719
           PG++P  RRA+YRATAKALASLHSA++D+IGLGNYGR+++YCKRQ+ERWAKQY+AST EG
Sbjct: 138 PGVAPENRRAIYRATAKALASLHSANVDSIGLGNYGRRNDYCKRQIERWAKQYVASTREG 197

Query: 720 KSGRNPKMLELIDWLRQHIPAEDTSTTTAGLVHGDFRIDNVVFHPIEDKVIGILDWELST 899
           K    PKM  LIDWLR  IP EDTS  T GLVHGDFRIDN+VFHP ED+VIGILDWELST
Sbjct: 198 KPASYPKMFALIDWLRHQIPLEDTSGATGGLVHGDFRIDNLVFHPTEDRVIGILDWELST 257

Query: 900 LGNQMCDVAYSCLHYLVDIDLDKV 971
           LGNQMCDVAYSC+ Y+ DI  +KV
Sbjct: 258 LGNQMCDVAYSCMTYVADIGHEKV 281


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