BLASTX nr result

ID: Panax21_contig00016539 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00016539
         (455 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK96281.1| unknown [Populus trichocarpa x Populus deltoides]       70   2e-10
ref|XP_002300379.1| predicted protein [Populus trichocarpa] gi|2...    69   4e-10
ref|XP_003634765.1| PREDICTED: nudix hydrolase 10-like [Vitis vi...    67   1e-09
ref|XP_002321202.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08
emb|CAN70796.1| hypothetical protein VITISV_029203 [Vitis vinifera]    64   1e-08

>gb|ABK96281.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 294

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 33/37 (89%), Positives = 35/37 (94%)
 Frame = -1

Query: 131 RQYHKVFFQKSDLFFLCMLRPLSFDIQKQELEIEAAQ 21
           RQ+HK FF+KSDL FLCMLRPLSFDIQKQELEIEAAQ
Sbjct: 189 RQWHKSFFEKSDLVFLCMLRPLSFDIQKQELEIEAAQ 225


>ref|XP_002300379.1| predicted protein [Populus trichocarpa] gi|222847637|gb|EEE85184.1|
           predicted protein [Populus trichocarpa]
          Length = 294

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 32/37 (86%), Positives = 35/37 (94%)
 Frame = -1

Query: 131 RQYHKVFFQKSDLFFLCMLRPLSFDIQKQELEIEAAQ 21
           RQ+HK FF+KSDL FLCMLRPLSFDIQKQ+LEIEAAQ
Sbjct: 189 RQWHKSFFEKSDLVFLCMLRPLSFDIQKQDLEIEAAQ 225


>ref|XP_003634765.1| PREDICTED: nudix hydrolase 10-like [Vitis vinifera]
           gi|296089921|emb|CBI39740.3| unnamed protein product
           [Vitis vinifera]
          Length = 282

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 30/37 (81%), Positives = 35/37 (94%)
 Frame = -1

Query: 131 RQYHKVFFQKSDLFFLCMLRPLSFDIQKQELEIEAAQ 21
           RQ HK FF+KSDLFFLCM+RPLSFD+QKQELEI+AA+
Sbjct: 183 RQTHKSFFEKSDLFFLCMMRPLSFDVQKQELEIDAAK 219


>ref|XP_002321202.1| predicted protein [Populus trichocarpa] gi|222861975|gb|EEE99517.1|
           predicted protein [Populus trichocarpa]
          Length = 260

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 29/37 (78%), Positives = 33/37 (89%)
 Frame = -1

Query: 131 RQYHKVFFQKSDLFFLCMLRPLSFDIQKQELEIEAAQ 21
           RQ H+ FF KSDLFF+CMLRP SFDIQKQ+LE+EAAQ
Sbjct: 169 RQSHRSFFSKSDLFFICMLRPRSFDIQKQDLELEAAQ 205


>emb|CAN70796.1| hypothetical protein VITISV_029203 [Vitis vinifera]
          Length = 346

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 30/37 (81%), Positives = 33/37 (89%)
 Frame = -1

Query: 131 RQYHKVFFQKSDLFFLCMLRPLSFDIQKQELEIEAAQ 21
           RQ HK FF+KSDLFF+CML+PLSFDI KQE EIEAAQ
Sbjct: 247 RQSHKSFFEKSDLFFVCMLQPLSFDIXKQESEIEAAQ 283


Top