BLASTX nr result

ID: Panax21_contig00016538 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00016538
         (1368 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003520839.1| PREDICTED: uncharacterized protein LOC100797...   489   e-136
ref|XP_002279923.1| PREDICTED: uncharacterized protein LOC100267...   474   e-131
ref|XP_004171233.1| PREDICTED: mediator of RNA polymerase II tra...   461   e-127
ref|XP_002531290.1| protein with unknown function [Ricinus commu...   459   e-126
emb|CBI34155.3| unnamed protein product [Vitis vinifera]              455   e-125

>ref|XP_003520839.1| PREDICTED: uncharacterized protein LOC100797588 [Glycine max]
          Length = 1813

 Score =  489 bits (1259), Expect = e-136
 Identities = 266/472 (56%), Positives = 323/472 (68%), Gaps = 17/472 (3%)
 Frame = +2

Query: 2    KAGTSSPKWEVGTQ---INNVTKATNVAPXXXXXXXXXXXXMGLTQXXXXXXXXXGPERN 172
            KAG+ SPKWEVG Q   ++NVTKA++                G  Q         G  RN
Sbjct: 699  KAGSPSPKWEVGMQMPLVSNVTKASSATNHYSGSLFSSGSVKGPVQSSSVGSIPTGQGRN 758

Query: 173  TTVKKLSASKSDQDLTSLRSPHSADVGLYTTVDEDQLTV---------SRNQSARL---P 316
            +   KLSASKS+QDL SL+S HS D      +DE+QL V         + ++S+RL   P
Sbjct: 759  SAGTKLSASKSEQDLASLKSLHSVDSSSSAAMDEEQLRVFSDNSNDALAGSRSSRLLSPP 818

Query: 317  RSTIPQVSASNAKANAPRNSPPTGVIAGSFRVSGSNSWVVNPISERPNSF--HSSSLDVV 490
            R T  ++S  N++ N P+          SF+ +GS S    P+S+   S   +++  DV 
Sbjct: 819  RPTGSRMSIPNSRPNGPQ--------VESFKAAGSGSCATTPVSQTLESTVSYNTGEDVT 870

Query: 491  PRHDKGSGKRTVSDMLSLVPSLQCLEVGERSCKRRNITESVFNEQPSSQMVISSEVIGKT 670
             ++D+ SGKRT SDML+L+PSLQ +E     CK+R I++S   +    Q V+S+E+I +T
Sbjct: 871  SKNDRKSGKRTASDMLTLIPSLQGVESNSGICKKRKISDSAGCQLSLPQGVMSAEIIPRT 930

Query: 671  EGYNYASLIAEANKGNTPSNIYVSALLHVVRHCSLCIKHARLTSQMEALDIPYVEEVGLR 850
            EGY+Y SLIAEANKGN PS+IYV+ALLHVVRHCSLCIKHARLTSQM+ALDI YVEEVGLR
Sbjct: 931  EGYSYGSLIAEANKGNVPSSIYVAALLHVVRHCSLCIKHARLTSQMDALDISYVEEVGLR 990

Query: 851  NDSPNLWFRLPSSRGDTWKHICLRLGRPGSMYWDVKINDQHFRDLWNLQKGSNSTPWGCG 1030
            + S N+WFRLP +RGD+W+HICLRLGRPG MYWDVKINDQHFRDLW LQKG N+TPWG G
Sbjct: 991  SGSSNIWFRLPLARGDSWQHICLRLGRPGCMYWDVKINDQHFRDLWELQKGINNTPWGSG 1050

Query: 1031 VRIANTSDIDSHIRYDQEGVVLTYNSVEADSIKKLVADIQRLSNARMFSLGMRKLLGVSS 1210
            VRIANTSDIDSHI YD +GVVL+Y SVE DSIKKLVADIQRL+NAR F+LGMRKLLGV +
Sbjct: 1051 VRIANTSDIDSHIHYDPDGVVLSYQSVEVDSIKKLVADIQRLANARTFALGMRKLLGVRA 1110

Query: 1211 EEKLEDSTTPSXXXXXXXXXXXXXXXXFSEQTRRAFRIEAVGLMSLWFSFGS 1366
            EEK E+  T S                 +EQ RRAFRIEAVGLMSLWFSFGS
Sbjct: 1111 EEKSEELVTSSDTKTPSTKVALDTADKLTEQMRRAFRIEAVGLMSLWFSFGS 1162


>ref|XP_002279923.1| PREDICTED: uncharacterized protein LOC100267561 [Vitis vinifera]
          Length = 1758

 Score =  474 bits (1219), Expect = e-131
 Identities = 268/455 (58%), Positives = 296/455 (65%)
 Frame = +2

Query: 2    KAGTSSPKWEVGTQINNVTKATNVAPXXXXXXXXXXXXMGLTQXXXXXXXXXGPERNTTV 181
            KAG SSP               NVAP             G  Q          P R+   
Sbjct: 699  KAGASSP---------------NVAPHYGGSLYSSGNMKGSMQSSSVSLQSSAPVRSAAG 743

Query: 182  KKLSASKSDQDLTSLRSPHSADVGLYTTVDEDQLTVSRNQSARLPRSTIPQVSASNAKAN 361
            KKLSASKSDQDL SLRSPHS ++G  TT+DED L +       L  S+   VS + A  +
Sbjct: 744  KKLSASKSDQDLASLRSPHSLEIGSGTTMDEDHLRL-------LSDSSKEAVSGTQAPDS 796

Query: 362  APRNSPPTGVIAGSFRVSGSNSWVVNPISERPNSFHSSSLDVVPRHDKGSGKRTVSDMLS 541
            A                                +FH SS DVV + D  S KR+VSDML 
Sbjct: 797  A--------------------------------NFHGSSHDVVSKQDTHSRKRSVSDMLD 824

Query: 542  LVPSLQCLEVGERSCKRRNITESVFNEQPSSQMVISSEVIGKTEGYNYASLIAEANKGNT 721
            L+PSLQ LE   R  KRR I+ES    QP SQ +ISSE+  KTEGY+Y +LIAEANKGN 
Sbjct: 825  LIPSLQNLEANTRFYKRRKISESAHTLQPLSQALISSEIACKTEGYSYGNLIAEANKGNA 884

Query: 722  PSNIYVSALLHVVRHCSLCIKHARLTSQMEALDIPYVEEVGLRNDSPNLWFRLPSSRGDT 901
            PS++YVSALLHVVRHCSLCIKHARLTSQMEALDIPYVEEVGLRN S NLWFRLP S GD+
Sbjct: 885  PSSVYVSALLHVVRHCSLCIKHARLTSQMEALDIPYVEEVGLRNASSNLWFRLPFSSGDS 944

Query: 902  WKHICLRLGRPGSMYWDVKINDQHFRDLWNLQKGSNSTPWGCGVRIANTSDIDSHIRYDQ 1081
            W+HICLRLGRPGSMYWDVKI DQHFRDLW LQKGS++T WG GVRIANTSDIDSHIRYD 
Sbjct: 945  WQHICLRLGRPGSMYWDVKIIDQHFRDLWELQKGSSNTTWGSGVRIANTSDIDSHIRYDP 1004

Query: 1082 EGVVLTYNSVEADSIKKLVADIQRLSNARMFSLGMRKLLGVSSEEKLEDSTTPSXXXXXX 1261
            EGVVL+Y SVEADSIKKLVADIQRLSNARMF+LGMRKLLGV  +EK E+ +         
Sbjct: 1005 EGVVLSYQSVEADSIKKLVADIQRLSNARMFALGMRKLLGVRMDEKPEEISANCDGKAPV 1064

Query: 1262 XXXXXXXXXXFSEQTRRAFRIEAVGLMSLWFSFGS 1366
                       SEQ RRAFRIEAVGLMSLWFSFGS
Sbjct: 1065 GVKGVEVSDKLSEQMRRAFRIEAVGLMSLWFSFGS 1099


>ref|XP_004171233.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            14-like, partial [Cucumis sativus]
          Length = 1332

 Score =  461 bits (1185), Expect = e-127
 Identities = 258/468 (55%), Positives = 316/468 (67%), Gaps = 15/468 (3%)
 Frame = +2

Query: 8    GTSSPKWEVG---TQINNVTKATNVAPXXXXXXXXXXXXMGLTQXXXXXXXXXGPERNTT 178
            G  SPKWEVG   +Q NNV K +N+               G            GP R   
Sbjct: 209  GVPSPKWEVGMQPSQGNNVAKLSNIPSHSNGSLYSASNLKGPVPSTSMGSISSGPGRGAA 268

Query: 179  VKKLSASKSDQDLTSLRSPHSADVGLYTTVDEDQLT---------VSRNQSARLPRSTI- 328
             ++LS SKS+QDLTSLR  +  + G YT++D+D ++         V  N+S+RL   T  
Sbjct: 269  TRRLSNSKSEQDLTSLRYTNPVEGGSYTSLDDDHISMPSDTSKDGVYANRSSRLLSPTPH 328

Query: 329  --PQVSASNAKANAPRNSPPTGVIAGSFRVSGSNSWVVNPISERPNSFHSSSLDVVPRHD 502
              P++S S  K N  R+SP T    GS R SGS S V  P+S+  ++  S   +   + D
Sbjct: 329  GGPRISGS-IKPNGSRSSP-TAAPTGSLRPSGSCSSVSTPVSQNQDTCSSPVYESGLKSD 386

Query: 503  KGSGKRTVSDMLSLVPSLQCLEVGERSCKRRNITESVFNEQPSSQMVISSEVIGKTEGYN 682
              S KRT SDML+L+PSL+ ++      KRR ++ES    +PSSQ++IS E++ +TE Y+
Sbjct: 387  C-SRKRTASDMLNLIPSLKGIDAYNGLSKRRKVSESARFSKPSSQLLISKEMVSRTE-YS 444

Query: 683  YASLIAEANKGNTPSNIYVSALLHVVRHCSLCIKHARLTSQMEALDIPYVEEVGLRNDSP 862
            Y +LIAEANKG  PS+ YVSALLHV+RHCSLCIKHARLTSQM+ALDIP+VEEVGLRN S 
Sbjct: 445  YGNLIAEANKGAAPSSTYVSALLHVIRHCSLCIKHARLTSQMDALDIPFVEEVGLRNAST 504

Query: 863  NLWFRLPSSRGDTWKHICLRLGRPGSMYWDVKINDQHFRDLWNLQKGSNSTPWGCGVRIA 1042
            N+WFRLP +R D+W+HICLRLGRPG+M WDVKI+DQHFRDLW LQK S + PWG  VRIA
Sbjct: 505  NIWFRLPFARDDSWQHICLRLGRPGTMCWDVKIHDQHFRDLWELQKKSTTAPWGPDVRIA 564

Query: 1043 NTSDIDSHIRYDQEGVVLTYNSVEADSIKKLVADIQRLSNARMFSLGMRKLLGVSSEEKL 1222
            NTSD DSHIRYD EGVVL+Y SVEADSI KLVADI+RLSNARMF++GMRKLLGV ++EKL
Sbjct: 565  NTSDKDSHIRYDPEGVVLSYQSVEADSIDKLVADIRRLSNARMFAIGMRKLLGVGTDEKL 624

Query: 1223 EDSTTPSXXXXXXXXXXXXXXXXFSEQTRRAFRIEAVGLMSLWFSFGS 1366
            E+S+T S                 SEQ RRAFRIEAVGLMSLWFSFGS
Sbjct: 625  EESSTTSDIKAPVTKGASDTVDKLSEQMRRAFRIEAVGLMSLWFSFGS 672


>ref|XP_002531290.1| protein with unknown function [Ricinus communis]
            gi|223529123|gb|EEF31103.1| protein with unknown function
            [Ricinus communis]
          Length = 1746

 Score =  459 bits (1180), Expect = e-126
 Identities = 249/458 (54%), Positives = 294/458 (64%), Gaps = 3/458 (0%)
 Frame = +2

Query: 2    KAGTSSPKWEVGTQIN---NVTKATNVAPXXXXXXXXXXXXMGLTQXXXXXXXXXGPERN 172
            KAG+ SPKWE G Q++   N+ K ++ +P             G            G  RN
Sbjct: 695  KAGSPSPKWEGGLQVSQMSNIVKVSSTSPHYNGSLYPSNSLKGPVHSVSFSSPSPGLGRN 754

Query: 173  TTVKKLSASKSDQDLTSLRSPHSADVGLYTTVDEDQLTVSRNQSARLPRSTIPQVSASNA 352
            TT++KL ASKSDQDL SLRSPHS +                          + Q +  NA
Sbjct: 755  TTIRKLPASKSDQDLASLRSPHSVE--------------------------VAQAAGDNA 788

Query: 353  KANAPRNSPPTGVIAGSFRVSGSNSWVVNPISERPNSFHSSSLDVVPRHDKGSGKRTVSD 532
              + P ++                                     V +HDK   KRTVSD
Sbjct: 789  ICHFPGHN-------------------------------------VSKHDKNPRKRTVSD 811

Query: 533  MLSLVPSLQCLEVGERSCKRRNITESVFNEQPSSQMVISSEVIGKTEGYNYASLIAEANK 712
            ML+ +PSLQ ++      KRR  +ESV ++Q S++++I  E+  K EGY+Y  LIAEANK
Sbjct: 812  MLNFIPSLQNIDAQVGFAKRRRTSESVHSQQHSAKILILPEIAFKHEGYSYGDLIAEANK 871

Query: 713  GNTPSNIYVSALLHVVRHCSLCIKHARLTSQMEALDIPYVEEVGLRNDSPNLWFRLPSSR 892
            GN PS+IYVSALLHVVRHCSLCIKHARLTSQMEAL+IPYVEEVGLRN S N+WFRLP +R
Sbjct: 872  GNAPSSIYVSALLHVVRHCSLCIKHARLTSQMEALEIPYVEEVGLRNASSNIWFRLPFAR 931

Query: 893  GDTWKHICLRLGRPGSMYWDVKINDQHFRDLWNLQKGSNSTPWGCGVRIANTSDIDSHIR 1072
            GD+W+HICLRLGRPGSMYWDVKINDQHFRDLW LQKGS+ TPWG GVRIANTSD+DSHIR
Sbjct: 932  GDSWQHICLRLGRPGSMYWDVKINDQHFRDLWELQKGSSGTPWGSGVRIANTSDVDSHIR 991

Query: 1073 YDQEGVVLTYNSVEADSIKKLVADIQRLSNARMFSLGMRKLLGVSSEEKLEDSTTPSXXX 1252
            YD EGVVL+Y SVEADSIKKLVADI+RLSNARMF+LGMRKLLGV  +EKL++S+  S   
Sbjct: 992  YDLEGVVLSYQSVEADSIKKLVADIRRLSNARMFALGMRKLLGVKPDEKLDESSANSDVK 1051

Query: 1253 XXXXXXXXXXXXXFSEQTRRAFRIEAVGLMSLWFSFGS 1366
                          SEQ RRAF+IEAVGLMSLWFSFGS
Sbjct: 1052 VPVGGKSVEAADKLSEQMRRAFKIEAVGLMSLWFSFGS 1089


>emb|CBI34155.3| unnamed protein product [Vitis vinifera]
          Length = 1724

 Score =  455 bits (1171), Expect = e-125
 Identities = 244/381 (64%), Positives = 275/381 (72%), Gaps = 2/381 (0%)
 Frame = +2

Query: 230  SPHSADVGLYTTVDEDQLTVSRNQSARLPRSTIPQVSASNAKANAPRNSPPTGVIAGSFR 409
            S  S+ +G  TT+DED L +  + S                             ++GS R
Sbjct: 712  SMQSSSIGSGTTMDEDHLRLLSDSSKE--------------------------AVSGS-R 744

Query: 410  VSGSNSWVVNPISERPNS--FHSSSLDVVPRHDKGSGKRTVSDMLSLVPSLQCLEVGERS 583
             +GS+SWV +P S+ P+S  FH SS DVV + D  S KR+VSDML L+PSLQ LE   R 
Sbjct: 745  AAGSSSWVTSPTSQAPDSANFHGSSHDVVSKQDTHSRKRSVSDMLDLIPSLQNLEANTRF 804

Query: 584  CKRRNITESVFNEQPSSQMVISSEVIGKTEGYNYASLIAEANKGNTPSNIYVSALLHVVR 763
             KRR I+ES    QP SQ +ISSE+  KTEGY+Y +LIAEANKGN PS++YVSALLHVVR
Sbjct: 805  YKRRKISESAHTLQPLSQALISSEIACKTEGYSYGNLIAEANKGNAPSSVYVSALLHVVR 864

Query: 764  HCSLCIKHARLTSQMEALDIPYVEEVGLRNDSPNLWFRLPSSRGDTWKHICLRLGRPGSM 943
            HCSLCIKHARLTSQMEALDIPYVEEVGLRN S NLWFRLP S GD+W+HICLRLGRPGSM
Sbjct: 865  HCSLCIKHARLTSQMEALDIPYVEEVGLRNASSNLWFRLPFSSGDSWQHICLRLGRPGSM 924

Query: 944  YWDVKINDQHFRDLWNLQKGSNSTPWGCGVRIANTSDIDSHIRYDQEGVVLTYNSVEADS 1123
            YWDVKI DQHFRDLW LQKGS++T WG GVRIANTSDIDSHIRYD EGVVL+Y SVEADS
Sbjct: 925  YWDVKIIDQHFRDLWELQKGSSNTTWGSGVRIANTSDIDSHIRYDPEGVVLSYQSVEADS 984

Query: 1124 IKKLVADIQRLSNARMFSLGMRKLLGVSSEEKLEDSTTPSXXXXXXXXXXXXXXXXFSEQ 1303
            IKKLVADIQRLSNARMF+LGMRKLLGV  +EK E+ +                    SEQ
Sbjct: 985  IKKLVADIQRLSNARMFALGMRKLLGVRMDEKPEEISANCDGKAPVGVKGVEVSDKLSEQ 1044

Query: 1304 TRRAFRIEAVGLMSLWFSFGS 1366
             RRAFRIEAVGLMSLWFSFGS
Sbjct: 1045 MRRAFRIEAVGLMSLWFSFGS 1065


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