BLASTX nr result

ID: Panax21_contig00016529 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00016529
         (648 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269430.1| PREDICTED: zinc finger CCCH domain-containin...   189   3e-46
emb|CAN68018.1| hypothetical protein VITISV_014472 [Vitis vinifera]   189   3e-46
ref|XP_002528295.1| transcription factor, putative [Ricinus comm...   174   1e-41
ref|XP_004163130.1| PREDICTED: zinc finger CCCH domain-containin...   166   3e-39
ref|XP_004148184.1| PREDICTED: zinc finger CCCH domain-containin...   165   8e-39

>ref|XP_002269430.1| PREDICTED: zinc finger CCCH domain-containing protein 29-like [Vitis
            vinifera]
          Length = 689

 Score =  189 bits (481), Expect = 3e-46
 Identities = 116/221 (52%), Positives = 132/221 (59%), Gaps = 7/221 (3%)
 Frame = -3

Query: 643  TQQQRQQLIDDLSNLSSPSRWNN--NRFGEMNPTNLDDVFGSLDSSYLSQLQGLSPRVAT 470
            +Q   +QL+D++S+LSSPS WN   +R GE+ PTNLDD+FGS D S LSQLQGLS +  T
Sbjct: 432  SQLTHKQLMDEMSSLSSPSCWNKEFSRIGELKPTNLDDMFGSFDPSVLSQLQGLSLKATT 491

Query: 469  SA--TPQMQSPTGHQMRQQNMNQ--LXXXXXXXXXXXXXXXXXXYGFDXXXXXXXXXXXX 302
                +PQ+QSPTG QMRQ NMNQ                     YGFD            
Sbjct: 492  PQLQSPQLQSPTGLQMRQ-NMNQQRASYPTKTTVTSSPVRKTSSYGFDSSAAVAAAVMNS 550

Query: 301  XXXAFAKRSQSFIDRGAVSHRPAGFXXXXXXXXXXXXXXXSDWSSPSGKLDWGYHGEDLN 122
               AFAKRSQSFIDRG +SHR  GF                DWSSP GKLDWG  G++LN
Sbjct: 551  RSSAFAKRSQSFIDRGGMSHRSPGFTAASNSATLMSSNLS-DWSSPDGKLDWGIQGDELN 609

Query: 121  KLKKSASFGFRSGN-AARNSGMAQSFDEPDVSWVNSLVKDV 2
            KLKKSASFGFR+ N A     M  S DEPDVSWVNSLVKDV
Sbjct: 610  KLKKSASFGFRTNNTATATQSMMASTDEPDVSWVNSLVKDV 650


>emb|CAN68018.1| hypothetical protein VITISV_014472 [Vitis vinifera]
          Length = 674

 Score =  189 bits (481), Expect = 3e-46
 Identities = 116/221 (52%), Positives = 132/221 (59%), Gaps = 7/221 (3%)
 Frame = -3

Query: 643  TQQQRQQLIDDLSNLSSPSRWNN--NRFGEMNPTNLDDVFGSLDSSYLSQLQGLSPRVAT 470
            +Q   +QL+D++S+LSSPS WN   +R GE+ PTNLDD+FGS D S LSQLQGLS +  T
Sbjct: 417  SQLTHKQLMDEMSSLSSPSCWNKEFSRIGELKPTNLDDMFGSFDPSVLSQLQGLSLKATT 476

Query: 469  SA--TPQMQSPTGHQMRQQNMNQ--LXXXXXXXXXXXXXXXXXXYGFDXXXXXXXXXXXX 302
                +PQ+QSPTG QMRQ NMNQ                     YGFD            
Sbjct: 477  PQLQSPQLQSPTGLQMRQ-NMNQQRASYPTKTTVTSSPVRKTSSYGFDSSAAVAAAVMNS 535

Query: 301  XXXAFAKRSQSFIDRGAVSHRPAGFXXXXXXXXXXXXXXXSDWSSPSGKLDWGYHGEDLN 122
               AFAKRSQSFIDRG +SHR  GF                DWSSP GKLDWG  G++LN
Sbjct: 536  RSSAFAKRSQSFIDRGGMSHRSPGFTAASNSATLMSSNLS-DWSSPDGKLDWGIQGDELN 594

Query: 121  KLKKSASFGFRSGN-AARNSGMAQSFDEPDVSWVNSLVKDV 2
            KLKKSASFGFR+ N A     M  S DEPDVSWVNSLVKDV
Sbjct: 595  KLKKSASFGFRTNNTATATQSMMASTDEPDVSWVNSLVKDV 635


>ref|XP_002528295.1| transcription factor, putative [Ricinus communis]
           gi|223532250|gb|EEF34053.1| transcription factor,
           putative [Ricinus communis]
          Length = 346

 Score =  174 bits (442), Expect = 1e-41
 Identities = 110/218 (50%), Positives = 130/218 (59%), Gaps = 5/218 (2%)
 Frame = -3

Query: 640 QQQRQQLIDDLSNLSSPSRWNN--NRFGEMNPTNLDDVFGSLDSSYLSQLQGLSPRVATS 467
           Q Q+QQ +D++S LSSPS W+   NR G++ PTNLDDVFGSLD S L+ LQGLS +   S
Sbjct: 95  QLQQQQFMDEMSGLSSPSCWSKDFNRVGDLKPTNLDDVFGSLDPSLLAPLQGLSFK---S 151

Query: 466 ATP-QMQSPTGHQMRQQNMNQLXXXXXXXXXXXXXXXXXXYGFDXXXXXXXXXXXXXXXA 290
           +TP Q+QSPTG ++RQ NMNQ                   YGFD               A
Sbjct: 152 STPTQLQSPTGLEIRQ-NMNQFRSSYPTNLSSSPVRKPAAYGFDSSAAVAAAMMNSRSSA 210

Query: 289 FAKRSQSFIDRGAVSHRPAGFXXXXXXXXXXXXXXXSDWSSPSGKLDWGYHGEDLNKLKK 110
           FAKRS SFIDRGA ++R                   SDWSSP GKLDWG  G++LNKLKK
Sbjct: 211 FAKRSHSFIDRGAATNRLG--ITAAANSVSMMSANLSDWSSPDGKLDWGVQGDELNKLKK 268

Query: 109 SASFGFRSGN--AARNSGMAQSFDEPDVSWVNSLVKDV 2
           SASFGFRS N    R +    + DEPDVSWVN+LVKDV
Sbjct: 269 SASFGFRSSNNPTMRTNFALPNVDEPDVSWVNTLVKDV 306


>ref|XP_004163130.1| PREDICTED: zinc finger CCCH domain-containing protein 29-like
            [Cucumis sativus]
          Length = 683

 Score =  166 bits (421), Expect = 3e-39
 Identities = 111/215 (51%), Positives = 125/215 (58%), Gaps = 3/215 (1%)
 Frame = -3

Query: 637  QQRQQLIDDLSNLSSPSRWNNN--RFGEMNPTNLDDVFGSLDSSYLSQLQGLSPRVATSA 464
            Q +QQLID++S LSSP  WN +  R  E+ P+NLDD+FGSLDSS LSQLQG S +   SA
Sbjct: 437  QHQQQLIDEISRLSSPY-WNADVSRTAELKPSNLDDMFGSLDSSLLSQLQGASLKTPISA 495

Query: 463  TPQMQSPTGHQMRQQNMNQLXXXXXXXXXXXXXXXXXXY-GFDXXXXXXXXXXXXXXXAF 287
              Q+QSPTG QMRQ NM+QL                    GFD               AF
Sbjct: 496  --QVQSPTGLQMRQ-NMSQLRASYPANNLSSSPVKKPSSFGFDSSSAVAAAVMNSRSAAF 552

Query: 286  AKRSQSFIDRGAVSHRPAGFXXXXXXXXXXXXXXXSDWSSPSGKLDWGYHGEDLNKLKKS 107
            AKRSQSFIDR AVS  P GF                DW+SP GKLDWG +G DLNKLKKS
Sbjct: 553  AKRSQSFIDRAAVSRLP-GFTGAANSAATMSSHLS-DWNSPDGKLDWGMNGTDLNKLKKS 610

Query: 106  ASFGFRSGNAARNSGMAQSFDEPDVSWVNSLVKDV 2
            ASFG R+G        A   +EPDVSWVNSLVKDV
Sbjct: 611  ASFGIRNGTPT----FAPPVEEPDVSWVNSLVKDV 641


>ref|XP_004148184.1| PREDICTED: zinc finger CCCH domain-containing protein 29-like
            [Cucumis sativus]
          Length = 683

 Score =  165 bits (417), Expect = 8e-39
 Identities = 107/214 (50%), Positives = 121/214 (56%), Gaps = 2/214 (0%)
 Frame = -3

Query: 637  QQRQQLIDDLSNLSSPSRWNNN--RFGEMNPTNLDDVFGSLDSSYLSQLQGLSPRVATSA 464
            Q +QQLID++S LSSP  WN +  R  E+ P+NLDD+FGSLDSS LSQLQG S +   SA
Sbjct: 437  QHQQQLIDEISRLSSPY-WNADVSRTAELKPSNLDDMFGSLDSSLLSQLQGASLKTPISA 495

Query: 463  TPQMQSPTGHQMRQQNMNQLXXXXXXXXXXXXXXXXXXYGFDXXXXXXXXXXXXXXXAFA 284
              Q+QSPTG QMRQ                        +GFD               AFA
Sbjct: 496  --QVQSPTGLQMRQSMSQLRASYPANNLSSSPVKKPSSFGFDSSSAVAAAVMNSRSAAFA 553

Query: 283  KRSQSFIDRGAVSHRPAGFXXXXXXXXXXXXXXXSDWSSPSGKLDWGYHGEDLNKLKKSA 104
            KRSQSFIDR AVS  P GF                DW+SP GKLDWG +G DLNKLKKSA
Sbjct: 554  KRSQSFIDRAAVSRLP-GFTGAANSAATMSSHLS-DWNSPDGKLDWGMNGTDLNKLKKSA 611

Query: 103  SFGFRSGNAARNSGMAQSFDEPDVSWVNSLVKDV 2
            SFG R+G        A   +EPDVSWVNSLVKDV
Sbjct: 612  SFGIRNGTPT----FAPPVEEPDVSWVNSLVKDV 641


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