BLASTX nr result

ID: Panax21_contig00016528 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00016528
         (642 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269430.1| PREDICTED: zinc finger CCCH domain-containin...   182   5e-44
emb|CAN68018.1| hypothetical protein VITISV_014472 [Vitis vinifera]   182   5e-44
ref|XP_002528295.1| transcription factor, putative [Ricinus comm...   168   7e-40
ref|XP_004163130.1| PREDICTED: zinc finger CCCH domain-containin...   162   4e-38
ref|XP_004148184.1| PREDICTED: zinc finger CCCH domain-containin...   161   1e-37

>ref|XP_002269430.1| PREDICTED: zinc finger CCCH domain-containing protein 29-like [Vitis
            vinifera]
          Length = 689

 Score =  182 bits (462), Expect = 5e-44
 Identities = 110/216 (50%), Positives = 127/216 (58%), Gaps = 6/216 (2%)
 Frame = -3

Query: 631  QQLIDDLSNLSSPSRWNN--NRFGEMNPTNLDDVFGSLDSSFLSQLQGLSPRVATSA--T 464
            +QL+D++S+LSSPS WN   +R GE+ PTNLDD+FGS D S LSQLQGLS +  T    +
Sbjct: 437  KQLMDEMSSLSSPSCWNKEFSRIGELKPTNLDDMFGSFDPSVLSQLQGLSLKATTPQLQS 496

Query: 463  PQMQSPTGHQMRQQNMNQLXXXXXXXXXXXXXXXXXXYE--FDXXXXXXXXXXXXXXXAF 290
            PQ+QSPTG QMRQ NMNQ                       FD               AF
Sbjct: 497  PQLQSPTGLQMRQ-NMNQQRASYPTKTTVTSSPVRKTSSYGFDSSAAVAAAVMNSRSSAF 555

Query: 289  AKRSQSFIDRGAVSHRPAGFXXXXXXXXXXXXXXXSDWSSPSGKLDWGYHGEDLNKLKKS 110
            AKRSQSFIDRG +SHR  GF                DWSSP GKLDWG  G++LNKLKKS
Sbjct: 556  AKRSQSFIDRGGMSHRSPGFTAASNSATLMSSNLS-DWSSPDGKLDWGIQGDELNKLKKS 614

Query: 109  ASFGFCSGNAARNSGMTPSFADEPDVSWVNSLVKDV 2
            ASFGF + N A  +    +  DEPDVSWVNSLVKDV
Sbjct: 615  ASFGFRTNNTATATQSMMASTDEPDVSWVNSLVKDV 650


>emb|CAN68018.1| hypothetical protein VITISV_014472 [Vitis vinifera]
          Length = 674

 Score =  182 bits (462), Expect = 5e-44
 Identities = 110/216 (50%), Positives = 127/216 (58%), Gaps = 6/216 (2%)
 Frame = -3

Query: 631  QQLIDDLSNLSSPSRWNN--NRFGEMNPTNLDDVFGSLDSSFLSQLQGLSPRVATSA--T 464
            +QL+D++S+LSSPS WN   +R GE+ PTNLDD+FGS D S LSQLQGLS +  T    +
Sbjct: 422  KQLMDEMSSLSSPSCWNKEFSRIGELKPTNLDDMFGSFDPSVLSQLQGLSLKATTPQLQS 481

Query: 463  PQMQSPTGHQMRQQNMNQLXXXXXXXXXXXXXXXXXXYE--FDXXXXXXXXXXXXXXXAF 290
            PQ+QSPTG QMRQ NMNQ                       FD               AF
Sbjct: 482  PQLQSPTGLQMRQ-NMNQQRASYPTKTTVTSSPVRKTSSYGFDSSAAVAAAVMNSRSSAF 540

Query: 289  AKRSQSFIDRGAVSHRPAGFXXXXXXXXXXXXXXXSDWSSPSGKLDWGYHGEDLNKLKKS 110
            AKRSQSFIDRG +SHR  GF                DWSSP GKLDWG  G++LNKLKKS
Sbjct: 541  AKRSQSFIDRGGMSHRSPGFTAASNSATLMSSNLS-DWSSPDGKLDWGIQGDELNKLKKS 599

Query: 109  ASFGFCSGNAARNSGMTPSFADEPDVSWVNSLVKDV 2
            ASFGF + N A  +    +  DEPDVSWVNSLVKDV
Sbjct: 600  ASFGFRTNNTATATQSMMASTDEPDVSWVNSLVKDV 635


>ref|XP_002528295.1| transcription factor, putative [Ricinus communis]
           gi|223532250|gb|EEF34053.1| transcription factor,
           putative [Ricinus communis]
          Length = 346

 Score =  168 bits (426), Expect = 7e-40
 Identities = 110/219 (50%), Positives = 129/219 (58%), Gaps = 7/219 (3%)
 Frame = -3

Query: 637 QRQQLIDDLSNLSSPSRWNN--NRFGEMNPTNLDDVFGSLDSSFLSQLQGLSPRVATSAT 464
           Q+QQ +D++S LSSPS W+   NR G++ PTNLDDVFGSLD S L+ LQGLS +   S+T
Sbjct: 97  QQQQFMDEMSGLSSPSCWSKDFNRVGDLKPTNLDDVFGSLDPSLLAPLQGLSFK---SST 153

Query: 463 P-QMQSPTGHQMRQQNMNQLXXXXXXXXXXXXXXXXXXYEFDXXXXXXXXXXXXXXXAFA 287
           P Q+QSPTG ++RQ NMNQ                   Y FD               AFA
Sbjct: 154 PTQLQSPTGLEIRQ-NMNQFRSSYPTNLSSSPVRKPAAYGFDSSAAVAAAMMNSRSSAFA 212

Query: 286 KRSQSFIDRGAVSHRPAGFXXXXXXXXXXXXXXXSDWSSPSGKLDWGYHGEDLNKLKKSA 107
           KRS SFIDRGA ++R                   SDWSSP GKLDWG  G++LNKLKKSA
Sbjct: 213 KRSHSFIDRGAATNRLG--ITAAANSVSMMSANLSDWSSPDGKLDWGVQGDELNKLKKSA 270

Query: 106 SFGFCSGNAARNSGMTPSFA----DEPDVSWVNSLVKDV 2
           SFGF S N   N  M  +FA    DEPDVSWVN+LVKDV
Sbjct: 271 SFGFRSSN---NPTMRTNFALPNVDEPDVSWVNTLVKDV 306


>ref|XP_004163130.1| PREDICTED: zinc finger CCCH domain-containing protein 29-like
            [Cucumis sativus]
          Length = 683

 Score =  162 bits (411), Expect = 4e-38
 Identities = 112/219 (51%), Positives = 127/219 (57%), Gaps = 6/219 (2%)
 Frame = -3

Query: 640  QQRQQLIDDLSNLSSPSRWNNN--RFGEMNPTNLDDVFGSLDSSFLSQLQGLSPRVATSA 467
            Q +QQLID++S LSSP  WN +  R  E+ P+NLDD+FGSLDSS LSQLQG S +   SA
Sbjct: 437  QHQQQLIDEISRLSSPY-WNADVSRTAELKPSNLDDMFGSLDSSLLSQLQGASLKTPISA 495

Query: 466  TPQMQSPTGHQMRQQNMNQLXXXXXXXXXXXXXXXXXXY-EFDXXXXXXXXXXXXXXXAF 290
              Q+QSPTG QMRQ NM+QL                     FD               AF
Sbjct: 496  --QVQSPTGLQMRQ-NMSQLRASYPANNLSSSPVKKPSSFGFDSSSAVAAAVMNSRSAAF 552

Query: 289  AKRSQSFIDRGAVSHRPAGFXXXXXXXXXXXXXXXSDWSSPSGKLDWGYHGEDLNKLKKS 110
            AKRSQSFIDR AVS  P GF                DW+SP GKLDWG +G DLNKLKKS
Sbjct: 553  AKRSQSFIDRAAVSRLP-GFTGAANSAATMSSHLS-DWNSPDGKLDWGMNGTDLNKLKKS 610

Query: 109  ASFGFCSGNAARNSGMTPSFA---DEPDVSWVNSLVKDV 2
            ASFG  +G        TP+FA   +EPDVSWVNSLVKDV
Sbjct: 611  ASFGIRNG--------TPTFAPPVEEPDVSWVNSLVKDV 641


>ref|XP_004148184.1| PREDICTED: zinc finger CCCH domain-containing protein 29-like
            [Cucumis sativus]
          Length = 683

 Score =  161 bits (407), Expect = 1e-37
 Identities = 108/218 (49%), Positives = 123/218 (56%), Gaps = 5/218 (2%)
 Frame = -3

Query: 640  QQRQQLIDDLSNLSSPSRWNNN--RFGEMNPTNLDDVFGSLDSSFLSQLQGLSPRVATSA 467
            Q +QQLID++S LSSP  WN +  R  E+ P+NLDD+FGSLDSS LSQLQG S +   SA
Sbjct: 437  QHQQQLIDEISRLSSPY-WNADVSRTAELKPSNLDDMFGSLDSSLLSQLQGASLKTPISA 495

Query: 466  TPQMQSPTGHQMRQQNMNQLXXXXXXXXXXXXXXXXXXYEFDXXXXXXXXXXXXXXXAFA 287
              Q+QSPTG QMRQ                        + FD               AFA
Sbjct: 496  --QVQSPTGLQMRQSMSQLRASYPANNLSSSPVKKPSSFGFDSSSAVAAAVMNSRSAAFA 553

Query: 286  KRSQSFIDRGAVSHRPAGFXXXXXXXXXXXXXXXSDWSSPSGKLDWGYHGEDLNKLKKSA 107
            KRSQSFIDR AVS  P GF                DW+SP GKLDWG +G DLNKLKKSA
Sbjct: 554  KRSQSFIDRAAVSRLP-GFTGAANSAATMSSHLS-DWNSPDGKLDWGMNGTDLNKLKKSA 611

Query: 106  SFGFCSGNAARNSGMTPSFA---DEPDVSWVNSLVKDV 2
            SFG  +G        TP+FA   +EPDVSWVNSLVKDV
Sbjct: 612  SFGIRNG--------TPTFAPPVEEPDVSWVNSLVKDV 641


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