BLASTX nr result

ID: Panax21_contig00016517 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00016517
         (2232 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134132.1| PREDICTED: parafibromin-like [Cucumis sativu...   582   e-163
ref|XP_002282888.1| PREDICTED: parafibromin-like [Vitis vinifera]     582   e-163
ref|XP_002517109.1| conserved hypothetical protein [Ricinus comm...   552   e-154
ref|XP_003537641.1| PREDICTED: parafibromin-like [Glycine max]        545   e-152
ref|XP_002315762.1| PAF1 complex component [Populus trichocarpa]...   541   e-151

>ref|XP_004134132.1| PREDICTED: parafibromin-like [Cucumis sativus]
            gi|449513423|ref|XP_004164322.1| PREDICTED:
            parafibromin-like [Cucumis sativus]
          Length = 407

 Score =  582 bits (1501), Expect = e-163
 Identities = 297/403 (73%), Positives = 338/403 (83%), Gaps = 11/403 (2%)
 Frame = +2

Query: 230  MDPLSALRDFTVRDKLDQINRLGDEFRFGTDYTFPCAIETAYRSKNRNLYTLETLVYFVT 409
            MDPLSALRDFT+R +LD+I R+ DEFRF +DY+FPC++ETAYRSK  NLYTLETLVY++ 
Sbjct: 1    MDPLSALRDFTIRGELDKIVRVNDEFRFASDYSFPCSVETAYRSKQGNLYTLETLVYYIK 60

Query: 410  NLQFKHHDYIRNASTHKIPAVSLVDRKPLIDYLHGKVSSSDAIEFIAPQNPSKFSS--SF 583
            N   KH +Y++NA T  I +V+  DRKPL+DYL GKVSSSDAIEF+ PQNP KF    S 
Sbjct: 61   NHHVKHTEYLQNARTQGITSVTFPDRKPLLDYLTGKVSSSDAIEFLVPQNP-KFPDLPSV 119

Query: 584  DEYRPEDSNLPPADNEIDINNQNYGARVPENPILMLKAIERPLKDRESLLECRNRDFYSV 763
            DEYRPED  +  A  +    +  +      + + M++AIERPLKDRESLLEC+NR+FY+V
Sbjct: 120  DEYRPEDPVIVGAAMDAVDEDDGFKDSTNVDYMTMIRAIERPLKDRESLLECKNRNFYNV 179

Query: 764  LVAATKRNEERERVESQQRKDGLVAKNRIER-------GFGDDLSSFDATPKPKMHLKGS 922
            LV +TKR EER+R+ESQQRKDGLVAK+R+         G+GDDL  +DA PKPKMHLKG 
Sbjct: 180  LVMSTKREEERQRLESQQRKDGLVAKSRLMGSDDRGLVGYGDDLG-YDANPKPKMHLKGG 238

Query: 923  KIGEGVPIILVPSAFQTLITIYNVKEFLEDGVYIPTDVKVKQMNGPKPDCVTVQKKFSRD 1102
            KIGEGVPIILVPSAFQTLITIYNVKEFLEDGV+IPTDVKVKQM G +PDCVTVQKKFSRD
Sbjct: 239  KIGEGVPIILVPSAFQTLITIYNVKEFLEDGVFIPTDVKVKQMKGARPDCVTVQKKFSRD 298

Query: 1103 R--VVTAYEVRDKPSALKAEDWDRVVAVFVLGKEWQFKDWPFKDHVEIFNKILGFYMRFE 1276
            R  VVTAYEVRDKPSALK+EDWDRVVAVFVLGKEWQFKDWPFKDHVEIFNKI+GFYMRFE
Sbjct: 299  RDRVVTAYEVRDKPSALKSEDWDRVVAVFVLGKEWQFKDWPFKDHVEIFNKIIGFYMRFE 358

Query: 1277 DDSVESAKIVKQWNVKIISISKNKRHQDRAAALEVWDRLEEFM 1405
            DDS+ESAK VKQWNVKIISISKNKRHQDRAAALEVWDRLEEF+
Sbjct: 359  DDSLESAKNVKQWNVKIISISKNKRHQDRAAALEVWDRLEEFV 401


>ref|XP_002282888.1| PREDICTED: parafibromin-like [Vitis vinifera]
          Length = 413

 Score =  582 bits (1500), Expect = e-163
 Identities = 299/407 (73%), Positives = 334/407 (82%), Gaps = 15/407 (3%)
 Frame = +2

Query: 230  MDPLSALRDFTVRDKLDQINRLGDEFRFGTDYTFPCAIETAYRSKNRNLYTLETLVYFVT 409
            MDPLSALRDFTVR +LD+I R+GDEFRFG+DYTFPC+ ETAYRSK  NLYTLETLVY+V 
Sbjct: 1    MDPLSALRDFTVRGELDKIVRVGDEFRFGSDYTFPCSAETAYRSKQGNLYTLETLVYYVK 60

Query: 410  NLQFKHHDYIRNASTHKIPAVSLVDRKPLIDYLHGKVSSSDAIEFIAPQNPSKFS---SS 580
            N   KH +Y+++A T +IPAV+L DRKPL++YL GKV+S+DAIEF+ PQNP        +
Sbjct: 61   NHHIKHTEYLQSARTQRIPAVTLPDRKPLLEYLQGKVASTDAIEFVVPQNPKIPDIGVDA 120

Query: 581  FDEYRPEDSNL----PPADNEIDINNQNYGARVPENPILMLKAIERPLKDRESLLECRNR 748
             DEYRPED  L     P  +E  ++N         + I M++A ERPLKDRESLLEC+ R
Sbjct: 121  VDEYRPEDPTLLAIRDPPGSEDALDNSRVRGFDNVDYISMIRASERPLKDRESLLECKQR 180

Query: 749  DFYSVLVAATKRNEERERVESQQRKDGLVAKNRI----ERGFG----DDLSSFDATPKPK 904
            DFYSVL+A+T+R EER R+ES QRKDGLVAK+R+    ERG G     D   +D TPKPK
Sbjct: 181  DFYSVLMASTRREEERHRLESHQRKDGLVAKSRLMGADERGLGFWKDGDELGYDGTPKPK 240

Query: 905  MHLKGSKIGEGVPIILVPSAFQTLITIYNVKEFLEDGVYIPTDVKVKQMNGPKPDCVTVQ 1084
            M L  SKIGEGVPIILVPSAFQTLITIYNVKEFLEDGV+IPTDVK KQM G KPDCVTVQ
Sbjct: 241  MLLNRSKIGEGVPIILVPSAFQTLITIYNVKEFLEDGVFIPTDVKAKQMKGAKPDCVTVQ 300

Query: 1085 KKFSRDRVVTAYEVRDKPSALKAEDWDRVVAVFVLGKEWQFKDWPFKDHVEIFNKILGFY 1264
            KKFSRDRVV AYEVRDKPSALK EDWDRVVAVFVLGKEWQFKDWPFKDHVEIFNKI+GFY
Sbjct: 301  KKFSRDRVVMAYEVRDKPSALKTEDWDRVVAVFVLGKEWQFKDWPFKDHVEIFNKIIGFY 360

Query: 1265 MRFEDDSVESAKIVKQWNVKIISISKNKRHQDRAAALEVWDRLEEFM 1405
            MRFEDDSVESAKIVKQWNVKIISISKNKRHQDRAAALEVWDRLEEF+
Sbjct: 361  MRFEDDSVESAKIVKQWNVKIISISKNKRHQDRAAALEVWDRLEEFV 407


>ref|XP_002517109.1| conserved hypothetical protein [Ricinus communis]
            gi|223543744|gb|EEF45272.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 409

 Score =  552 bits (1422), Expect = e-154
 Identities = 281/403 (69%), Positives = 328/403 (81%), Gaps = 11/403 (2%)
 Frame = +2

Query: 230  MDPLSALRDFTVRDKLDQINRLGDEFRFGTDYTFPCAIETAYRSKNRNLYTLETLVYFVT 409
            MDPLSALRDFT+R+ +D+I R+ DEFRF  +YTFPC I+TAYRSK  NLYTLETLVY++ 
Sbjct: 1    MDPLSALRDFTMRNDVDKIVRINDEFRFSNEYTFPCNIKTAYRSKQGNLYTLETLVYYIQ 60

Query: 410  NLQFKHHDYIRNASTHKIPAVSLVDRKPLIDYLHGKVSSSDAIEFIAPQNPSK---FSSS 580
            N   K  DY+++A    +PA++ +DRKPL DYL GKVSS+D+I F  PQNP+      + 
Sbjct: 61   NSHLKFTDYLQHARAAGLPAITFIDRKPLYDYLTGKVSSTDSIVFPLPQNPNPNLDLDND 120

Query: 581  FDEYRPEDSNLPPADNEIDINNQNYGARVPE-NPILMLKAIERPLKDRESLLECRNRDFY 757
             +     DS +     + D+ +   G  V E N I ++ ++ERP+KDRE+LLEC+ +DFY
Sbjct: 121  LNSNAVLDSTINNNSADADVASGGGGNNVKEDNLISIIYSMERPIKDREALLECKTKDFY 180

Query: 758  SVLVAATKRNEERERVESQQRKDGLVAKNRI----ERGFGDDLSSFDATPKPKM-HLKGS 922
            SVLVA+T+R EER+R+ESQQRKDGLVAK+R+    +RG+G D   +DA  KPKM HLKG 
Sbjct: 181  SVLVASTRREEERQRIESQQRKDGLVAKSRLMGSEDRGYGGDEMGYDANSKPKMLHLKGG 240

Query: 923  KIGEGVPIILVPSAFQTLITIYNVKEFLEDGVYIPTDVKVKQMNGPKPDCVTVQKKFS-- 1096
            K GEGVPIILVPSAFQTLITIYNVKEFLEDGVYIPTDVKVKQM G KPDCVTVQKKFS  
Sbjct: 241  KFGEGVPIILVPSAFQTLITIYNVKEFLEDGVYIPTDVKVKQMKGAKPDCVTVQKKFSTD 300

Query: 1097 RDRVVTAYEVRDKPSALKAEDWDRVVAVFVLGKEWQFKDWPFKDHVEIFNKILGFYMRFE 1276
            R+RV+TAYEVRDKPSALKAEDWDRVVAVFVLGKEWQFKDWPFKDHVEIFNKI+GF+MRFE
Sbjct: 301  RNRVMTAYEVRDKPSALKAEDWDRVVAVFVLGKEWQFKDWPFKDHVEIFNKIIGFFMRFE 360

Query: 1277 DDSVESAKIVKQWNVKIISISKNKRHQDRAAALEVWDRLEEFM 1405
            DDSVESAK VKQWNVKIISISKNKRHQDRAAALEVWDRLEEF+
Sbjct: 361  DDSVESAKTVKQWNVKIISISKNKRHQDRAAALEVWDRLEEFV 403


>ref|XP_003537641.1| PREDICTED: parafibromin-like [Glycine max]
          Length = 389

 Score =  545 bits (1405), Expect = e-152
 Identities = 272/398 (68%), Positives = 320/398 (80%), Gaps = 6/398 (1%)
 Frame = +2

Query: 230  MDPLSALRDFTVRDKLDQINRLGDEFRFGTDYTFPCAIETAYRSKNRNLYTLETLVYFVT 409
            MDPLSALR+FT+R ++++I R+  EFRFG +YTFPC +ETAYRS   N YTLETLV+++ 
Sbjct: 1    MDPLSALREFTMRGEVEKIVRVNAEFRFGEEYTFPCWVETAYRSTKGNRYTLETLVHYIQ 60

Query: 410  NLQFKHHDYIRNASTHKIPAVSLVDRKPLIDYLHGKVSSSDAIEFIAPQNPSKFSSSFDE 589
            N   KH +YI+N     IP+V+L DRKPL+ YL G +SSSD+IE+    +PS F +   +
Sbjct: 61   NHHLKHTEYIQNTFAVGIPSVTLPDRKPLLQYLQGTLSSSDSIEYRPHDDPSSFPAP--K 118

Query: 590  YRPEDSNLPPADNEIDINNQNYGARVPENPILMLKAIERPLKDRESLLECRNRDFYSVLV 769
              P   +LPP D  +D              I M+++ E+PLKDR+SLLEC+NRDFYSVLV
Sbjct: 119  STPNPPSLPPEDLNLDF-------------ISMIRSAEKPLKDRQSLLECKNRDFYSVLV 165

Query: 770  AATKRNEERERVESQQRKDGLVAKNRIER------GFGDDLSSFDATPKPKMHLKGSKIG 931
            +ATKR EER+R+ES QRKDGLVAK+R+        GF DD+  +D TPKPKMHLKG+KIG
Sbjct: 166  SATKREEERQRMESHQRKDGLVAKSRLMGSDDRGLGFSDDMGGYDPTPKPKMHLKGTKIG 225

Query: 932  EGVPIILVPSAFQTLITIYNVKEFLEDGVYIPTDVKVKQMNGPKPDCVTVQKKFSRDRVV 1111
            EGVPIILVPSAFQTLITIYNVKEFLEDGVYIPTDVKVKQM G +PDCVTVQKK SRDRVV
Sbjct: 226  EGVPIILVPSAFQTLITIYNVKEFLEDGVYIPTDVKVKQMKGARPDCVTVQKKLSRDRVV 285

Query: 1112 TAYEVRDKPSALKAEDWDRVVAVFVLGKEWQFKDWPFKDHVEIFNKILGFYMRFEDDSVE 1291
            TAYEVRDKPS LK +DWDRVVAVFVLGKEWQFKDWPFKDHVEIFNKI+GF+MRFEDDS+E
Sbjct: 286  TAYEVRDKPSTLKPDDWDRVVAVFVLGKEWQFKDWPFKDHVEIFNKIIGFFMRFEDDSLE 345

Query: 1292 SAKIVKQWNVKIISISKNKRHQDRAAALEVWDRLEEFM 1405
            S K VKQWNVKIISISKNKRHQDRAAAL+VW+RLE+F+
Sbjct: 346  SCKTVKQWNVKIISISKNKRHQDRAAALDVWERLEDFV 383


>ref|XP_002315762.1| PAF1 complex component [Populus trichocarpa]
            gi|222864802|gb|EEF01933.1| PAF1 complex component
            [Populus trichocarpa]
          Length = 405

 Score =  541 bits (1394), Expect = e-151
 Identities = 281/407 (69%), Positives = 326/407 (80%), Gaps = 15/407 (3%)
 Frame = +2

Query: 230  MDPLSALRDFTVRDKLDQINRLGDEFRFGTDYTFPCAIETAYRSKNRNLYTLETLVYFVT 409
            MDPLSALRDFT+R  LD+I R+ DEFRFG +YTFPC+ +TAYRSK  NLYTLETLVY + 
Sbjct: 1    MDPLSALRDFTIRGDLDKIIRINDEFRFGNEYTFPCSTKTAYRSKQGNLYTLETLVYCIQ 60

Query: 410  NLQFKHHDYIRNASTHKIPAVSLVDRKPLIDYLHGKVSSSDAIEFIAPQNPSKFSSSFDE 589
            N + K  +Y+++A    IP V+ +D KP+ +YL GK+SS+D+I F  PQ     + +   
Sbjct: 61   NTKIKFTNYLQDALALGIPPVTYIDWKPVKEYLSGKLSSTDSIVFPLPQESQNPNLN--- 117

Query: 590  YRPEDSNLPPADNEID-------INNQNYGARVPENPILMLKAIERPLKDRESLLECRNR 748
            YRP+D  L   D+ ID       +NN N G    EN + ++ A ERPLKDRESLLEC+NR
Sbjct: 118  YRPDDPML--LDSRIDDSAAADKVNNGNEGV---ENHVSLIYANERPLKDRESLLECKNR 172

Query: 749  DFYSVLVAATKRNEERERVESQQRKDGLVAKNRI----ERG--FGDDLSSFDATPKPKMH 910
            DFY VLVA+T+R EER + ESQQRKDGLVAK+R+    ERG  +G D   +D+  KPKMH
Sbjct: 173  DFYGVLVASTRREEERHKFESQQRKDGLVAKSRLMGTDERGIGYGGDELGYDSAAKPKMH 232

Query: 911  LKGSKIGEGVPIILVPSAFQTLITIYNVKEFLEDGVYIPTDVKVKQMNGPKPDCVTVQKK 1090
             KG KIGEGVPIILVPSAFQTLITIYNVKEFLEDG++IPTDVK KQM GPKP+CVTVQKK
Sbjct: 233  SKGGKIGEGVPIILVPSAFQTLITIYNVKEFLEDGIFIPTDVKAKQMKGPKPECVTVQKK 292

Query: 1091 FS--RDRVVTAYEVRDKPSALKAEDWDRVVAVFVLGKEWQFKDWPFKDHVEIFNKILGFY 1264
            FS  R+RV+TAYEVRDKPSALK +DWDRVVAVFVLGKEWQFKDWPFKDHVEIFNKI+GF+
Sbjct: 293  FSTDRNRVMTAYEVRDKPSALKGDDWDRVVAVFVLGKEWQFKDWPFKDHVEIFNKIIGFF 352

Query: 1265 MRFEDDSVESAKIVKQWNVKIISISKNKRHQDRAAALEVWDRLEEFM 1405
            MRFEDDSVESAKIVKQWNVKIISISKNKRHQDRAAALEVWDRLEEF+
Sbjct: 353  MRFEDDSVESAKIVKQWNVKIISISKNKRHQDRAAALEVWDRLEEFV 399


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