BLASTX nr result

ID: Panax21_contig00016505 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00016505
         (758 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264515.1| PREDICTED: mitochondrial import inner membra...   201   2e-49
ref|XP_003633330.1| PREDICTED: mitochondrial import inner membra...   196   6e-48
ref|XP_002316775.1| predicted protein [Populus trichocarpa] gi|2...   185   1e-44
ref|XP_002522766.1| Import inner membrane translocase subunit TI...   184   2e-44
ref|XP_002298860.1| predicted protein [Populus trichocarpa] gi|2...   183   3e-44

>ref|XP_002264515.1| PREDICTED: mitochondrial import inner membrane translocase subunit
           TIM50 [Vitis vinifera] gi|296089900|emb|CBI39719.3|
           unnamed protein product [Vitis vinifera]
          Length = 371

 Score =  201 bits (510), Expect = 2e-49
 Identities = 108/214 (50%), Positives = 137/214 (64%), Gaps = 19/214 (8%)
 Frame = -2

Query: 586 RARSFSTILKKINNR--CFSVTANPPK-----------------EPIVSASSIVDNQVXX 464
           R+R   + + K NNR  C  V+++PPK                 +PI+S++++VD Q   
Sbjct: 6   RSRGLCSFISK-NNRLFCSKVSSSPPKPPPSPASVAAVDQSPANQPIISSAALVDGQ--- 61

Query: 463 XXXXXXXXXXXXXXXXXPWNFLKYXXXXXXXXXXXXXGYVTYGYSLDEVDKKTKAFRASA 284
                             WNFLK+             GY +Y Y+LDEVD+KTKAFRASA
Sbjct: 62  --NPPPIPPPAPPSAKKSWNFLKFGLIGALTVGVATAGYASYAYTLDEVDEKTKAFRASA 119

Query: 283 NHAIQDDGTTLGKFQAMIHSAAWTVPAKFLELYVDVRRSIEEQVRGFTEPSSDKLLPDLH 104
             +++DD +   KF+A+ +++A TVPAK ++LY+D+RR IEEQV GFTEP SDKLLPDLH
Sbjct: 120 KDSVEDDASAFDKFKALAYTSAVTVPAKAIDLYLDMRRLIEEQVHGFTEPLSDKLLPDLH 179

Query: 103 PMEQHVFTLVLDLNETLIYSDWKRDRGWRTFKRP 2
           PMEQHV TLVLDLNETLIYSDWKRDRGWRTFKRP
Sbjct: 180 PMEQHVLTLVLDLNETLIYSDWKRDRGWRTFKRP 213


>ref|XP_003633330.1| PREDICTED: mitochondrial import inner membrane translocase subunit
           TIM50-like [Vitis vinifera] gi|296085020|emb|CBI28435.3|
           unnamed protein product [Vitis vinifera]
          Length = 362

 Score =  196 bits (497), Expect = 6e-48
 Identities = 98/181 (54%), Positives = 126/181 (69%), Gaps = 3/181 (1%)
 Frame = -2

Query: 535 SVTANPPKEPIVSASSIVDNQVXXXXXXXXXXXXXXXXXXXPWN---FLKYXXXXXXXXX 365
           +++ANPPKE I+S+SS   +                       +   FLK+         
Sbjct: 24  NISANPPKEAIISSSSSSSSSSSESLINDQAPSAPPSEPVAKKSSSAFLKFAIFGTLAGA 83

Query: 364 XXXXGYVTYGYSLDEVDKKTKAFRASANHAIQDDGTTLGKFQAMIHSAAWTVPAKFLELY 185
               GY +Y Y+LDEVD+KTKAFR SA + + D+ ++L KFQA+++SAA TVPAK +ELY
Sbjct: 84  TAAAGYASYAYTLDEVDEKTKAFRTSAKYTVGDNASSLDKFQALLYSAAMTVPAKAIELY 143

Query: 184 VDVRRSIEEQVRGFTEPSSDKLLPDLHPMEQHVFTLVLDLNETLIYSDWKRDRGWRTFKR 5
           +D+RR IEEQ+RGF EPSS+KLLPDLHP+EQH+FTLVLDLNETL+YSDWKR+RGWRTFKR
Sbjct: 144 LDLRRPIEEQIRGFAEPSSEKLLPDLHPLEQHIFTLVLDLNETLLYSDWKRERGWRTFKR 203

Query: 4   P 2
           P
Sbjct: 204 P 204


>ref|XP_002316775.1| predicted protein [Populus trichocarpa] gi|222859840|gb|EEE97387.1|
           predicted protein [Populus trichocarpa]
          Length = 361

 Score =  185 bits (469), Expect = 1e-44
 Identities = 97/196 (49%), Positives = 121/196 (61%)
 Frame = -2

Query: 589 SRARSFSTILKKINNRCFSVTANPPKEPIVSASSIVDNQVXXXXXXXXXXXXXXXXXXXP 410
           SR  S  +   K N R F       KEPI+S+ S + +Q                     
Sbjct: 8   SRILSIVSRNNKPNRRFFCSN----KEPIISSQSTIPDQ-SAAAAEEAPAQAAGIRENKA 62

Query: 409 WNFLKYXXXXXXXXXXXXXGYVTYGYSLDEVDKKTKAFRASANHAIQDDGTTLGKFQAMI 230
           WNF KY             GY +Y YSLDEV++KTK  R S N+   +D + + K+Q ++
Sbjct: 63  WNFFKYGIIGALTGATAFAGYASYAYSLDEVEEKTKTLRESVNYTASNDASNVEKYQGLL 122

Query: 229 HSAAWTVPAKFLELYVDVRRSIEEQVRGFTEPSSDKLLPDLHPMEQHVFTLVLDLNETLI 50
           +S   TVPAK +ELY+D+R+ +EE V+GFTEP+SDKLLPDLHP EQHVFTLVLDLNET+I
Sbjct: 123 YSTVMTVPAKAVELYLDLRKLLEEHVKGFTEPASDKLLPDLHPAEQHVFTLVLDLNETII 182

Query: 49  YSDWKRDRGWRTFKRP 2
           YSDWKRDRGWRTFKRP
Sbjct: 183 YSDWKRDRGWRTFKRP 198


>ref|XP_002522766.1| Import inner membrane translocase subunit TIM50-A, mitochondrial
           precursor, putative [Ricinus communis]
           gi|223538004|gb|EEF39617.1| Import inner membrane
           translocase subunit TIM50-A, mitochondrial precursor,
           putative [Ricinus communis]
          Length = 395

 Score =  184 bits (466), Expect = 2e-44
 Identities = 92/175 (52%), Positives = 118/175 (67%), Gaps = 4/175 (2%)
 Frame = -2

Query: 514 KEPIVSASSIVDNQVXXXXXXXXXXXXXXXXXXXP----WNFLKYXXXXXXXXXXXXXGY 347
           KE I+S+ SI+ +Q                         W FLK+             GY
Sbjct: 65  KESIISSQSIISDQAADATSASATETLAAAAAAAEERKGWGFLKFAIIASLAGASGLAGY 124

Query: 346 VTYGYSLDEVDKKTKAFRASANHAIQDDGTTLGKFQAMIHSAAWTVPAKFLELYVDVRRS 167
            TY Y+L+EV++KTKA R S N+   +D ++  K++ +++SAA TVPAK ++LY+D+RR+
Sbjct: 125 ATYAYTLNEVEEKTKALRESINYKTSEDASSAEKYKDLLYSAAMTVPAKAVQLYLDLRRN 184

Query: 166 IEEQVRGFTEPSSDKLLPDLHPMEQHVFTLVLDLNETLIYSDWKRDRGWRTFKRP 2
           IEEQV+GFTEPSSDKLLPDLHP EQHVFTLVLDLNET+IYSDW+RDRGWRTFKRP
Sbjct: 185 IEEQVKGFTEPSSDKLLPDLHPAEQHVFTLVLDLNETIIYSDWRRDRGWRTFKRP 239


>ref|XP_002298860.1| predicted protein [Populus trichocarpa] gi|222846118|gb|EEE83665.1|
           predicted protein [Populus trichocarpa]
          Length = 360

 Score =  183 bits (465), Expect = 3e-44
 Identities = 96/196 (48%), Positives = 123/196 (62%)
 Frame = -2

Query: 589 SRARSFSTILKKINNRCFSVTANPPKEPIVSASSIVDNQVXXXXXXXXXXXXXXXXXXXP 410
           SR  S ++   K N R F       KE  +S+ SI+ +Q                     
Sbjct: 8   SRILSIASRTNKPNRRFFCSN----KESTISSQSIISDQ--SAAAGEAPAQAVGSSENKA 61

Query: 409 WNFLKYXXXXXXXXXXXXXGYVTYGYSLDEVDKKTKAFRASANHAIQDDGTTLGKFQAMI 230
           WNF KY             GY +Y +SLDEV++KTKA R S N+   +D + + K+Q ++
Sbjct: 62  WNFFKYGIVGALTGATAFAGYASYAHSLDEVEEKTKALRESVNYTAANDASNVEKYQGLL 121

Query: 229 HSAAWTVPAKFLELYVDVRRSIEEQVRGFTEPSSDKLLPDLHPMEQHVFTLVLDLNETLI 50
           +S A TVPAK +ELY+D+RR +EE V+GFTEP+++KLLPDLHP EQHVFTLVLDLNET+I
Sbjct: 122 YSTAMTVPAKAVELYLDMRRLLEEHVKGFTEPAAEKLLPDLHPAEQHVFTLVLDLNETII 181

Query: 49  YSDWKRDRGWRTFKRP 2
           YSDWKRDRGWRTFKRP
Sbjct: 182 YSDWKRDRGWRTFKRP 197


Top