BLASTX nr result

ID: Panax21_contig00016496 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00016496
         (467 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280997.2| PREDICTED: DDB1- and CUL4-associated factor ...    84   9e-15
ref|XP_002528006.1| conserved hypothetical protein [Ricinus comm...    84   1e-14
ref|XP_004162499.1| PREDICTED: LOW QUALITY PROTEIN: DDB1- and CU...    82   3e-14
ref|XP_004136459.1| PREDICTED: DDB1- and CUL4-associated factor ...    82   3e-14
ref|XP_003523712.1| PREDICTED: DDB1- and CUL4-associated factor ...    79   3e-13

>ref|XP_002280997.2| PREDICTED: DDB1- and CUL4-associated factor homolog 1-like [Vitis
            vinifera]
          Length = 2024

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 60/161 (37%), Positives = 75/161 (46%), Gaps = 6/161 (3%)
 Frame = +1

Query: 1    KGSLLTDVNVFYTPSYSLKDNHGR----LVQLDNLEDSHNN-NNLGQVAPS-LQHGLLND 162
            K +LL D   F TP  + +D +GR     V  DNL+D+     +LGQ+ PS  Q G LND
Sbjct: 1447 KSNLLNDAIGFSTPCCTPRDQYGRPTPSSVLTDNLDDNQCGIPHLGQMTPSSFQLGSLND 1506

Query: 163  PQPTNTERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 342
            P   NTER                                                    
Sbjct: 1507 PHTGNTERLTLDSLVVQYLKHQHRQCPAPITTLPPLSLLHPHI----------------- 1549

Query: 343  XCPESRRSIDAPSNVTARLTTREYRSTYGGIHGSCRDRQFV 465
             CPE RRS+DAPSNVTARL+TRE+R+ +GGIHG+ RDRQF+
Sbjct: 1550 -CPEPRRSLDAPSNVTARLSTREFRNVHGGIHGNRRDRQFI 1589


>ref|XP_002528006.1| conserved hypothetical protein [Ricinus communis]
            gi|223532632|gb|EEF34418.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1871

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 59/155 (38%), Positives = 71/155 (45%)
 Frame = +1

Query: 1    KGSLLTDVNVFYTPSYSLKDNHGRLVQLDNLEDSHNNNNLGQVAPSLQHGLLNDPQPTNT 180
            K SLL D   + TP  +L+D HGR     +L D  ++N  G      Q GLLND QP+N+
Sbjct: 1301 KNSLLGDTVGYCTPISNLRDLHGRSTP-SSLVDYLDDNQYGNCT---QPGLLNDHQPSNS 1356

Query: 181  ERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCPESR 360
            ER                                                     CPE +
Sbjct: 1357 ERLTLDSLVVQYLKHQHRQCPAPITTLPPLSLLHPHV------------------CPEPK 1398

Query: 361  RSIDAPSNVTARLTTREYRSTYGGIHGSCRDRQFV 465
            RSIDAPSNVTARL TRE+RS YGG+HG+ RDRQFV
Sbjct: 1399 RSIDAPSNVTARLGTREFRSIYGGVHGNRRDRQFV 1433


>ref|XP_004162499.1| PREDICTED: LOW QUALITY PROTEIN: DDB1- and CUL4-associated factor
            homolog 1-like [Cucumis sativus]
          Length = 1900

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 57/160 (35%), Positives = 75/160 (46%), Gaps = 5/160 (3%)
 Frame = +1

Query: 1    KGSLLTDVNVFYTPSYS-LKDNHGRLVQ----LDNLEDSHNNNNLGQVAPSLQHGLLNDP 165
            K SL+TDV  F TPS + ++D  GR        D L+++  +  +G V PS   G LNDP
Sbjct: 1329 KSSLITDVG-FSTPSTTNMRDQLGRPAPGGFWTDCLDENQGSTQIGLVTPSSHPGNLNDP 1387

Query: 166  QPTNTERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 345
            QP+N+ER                                                     
Sbjct: 1388 QPSNSERITLDSLVVQYLKHQHRQCPTPITTLPPLSLLQPHV------------------ 1429

Query: 346  CPESRRSIDAPSNVTARLTTREYRSTYGGIHGSCRDRQFV 465
            CPE +RS+DAP NVT+RL +RE+RS YGG+HG+ RDRQFV
Sbjct: 1430 CPEPKRSLDAPWNVTSRLGSREFRSIYGGVHGNRRDRQFV 1469


>ref|XP_004136459.1| PREDICTED: DDB1- and CUL4-associated factor homolog 1-like [Cucumis
            sativus]
          Length = 1915

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 57/160 (35%), Positives = 75/160 (46%), Gaps = 5/160 (3%)
 Frame = +1

Query: 1    KGSLLTDVNVFYTPSYS-LKDNHGRLVQ----LDNLEDSHNNNNLGQVAPSLQHGLLNDP 165
            K SL+TDV  F TPS + ++D  GR        D L+++  +  +G V PS   G LNDP
Sbjct: 1344 KSSLITDVG-FSTPSTTNMRDQLGRPAPGGFWTDCLDENQGSTQIGLVTPSSHPGNLNDP 1402

Query: 166  QPTNTERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 345
            QP+N+ER                                                     
Sbjct: 1403 QPSNSERITLDSLVVQYLKHQHRQCPTPITTLPPLSLLQPHV------------------ 1444

Query: 346  CPESRRSIDAPSNVTARLTTREYRSTYGGIHGSCRDRQFV 465
            CPE +RS+DAP NVT+RL +RE+RS YGG+HG+ RDRQFV
Sbjct: 1445 CPEPKRSLDAPWNVTSRLGSREFRSIYGGVHGNRRDRQFV 1484


>ref|XP_003523712.1| PREDICTED: DDB1- and CUL4-associated factor homolog 1-like [Glycine
            max]
          Length = 1857

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 53/155 (34%), Positives = 72/155 (46%)
 Frame = +1

Query: 1    KGSLLTDVNVFYTPSYSLKDNHGRLVQLDNLEDSHNNNNLGQVAPSLQHGLLNDPQPTNT 180
            K SL TD    +TP+ +LK +      +D ++++ + +NLGQ+ PS Q  +LND QP N 
Sbjct: 1293 KSSLQTDAVGLFTPTCNLKQSR---CTIDLVDENQSISNLGQMTPSSQ--VLNDLQPNNA 1347

Query: 181  ERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCPESR 360
            ER                                                     CPE +
Sbjct: 1348 ERVTLDSLVVQYLKHQHRQCPAPITTLPPLSLLHPHV------------------CPEPK 1389

Query: 361  RSIDAPSNVTARLTTREYRSTYGGIHGSCRDRQFV 465
            RS+DAPSNVTAR  TRE++  YGG+HG+ RDRQFV
Sbjct: 1390 RSLDAPSNVTARFGTREFKYMYGGVHGNRRDRQFV 1424


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