BLASTX nr result

ID: Panax21_contig00016484 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00016484
         (619 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270040.2| PREDICTED: protein MOR1-like, partial [Vitis...   204   1e-50
emb|CBI25829.3| unnamed protein product [Vitis vinifera]              204   1e-50
ref|XP_002300496.1| microtubule organization protein [Populus tr...   202   5e-50
ref|XP_002879562.1| hypothetical protein ARALYDRAFT_482523 [Arab...   198   6e-49
ref|NP_565811.2| microtubule organization 1 protein [Arabidopsis...   198   6e-49

>ref|XP_002270040.2| PREDICTED: protein MOR1-like, partial [Vitis vinifera]
          Length = 977

 Score =  204 bits (518), Expect = 1e-50
 Identities = 103/123 (83%), Positives = 110/123 (89%)
 Frame = +3

Query: 249  FEYYGKIMKEHKNPKVLSEGLLWMVSAVEDFGVSLLKLKDLIDFCKDIGLQSRAAATRNA 428
            FE   KIMKEHKNPKVLSEG+LWMVSAVEDFGVS LKLKDLIDFCKD GLQS AAATRNA
Sbjct: 723  FERLYKIMKEHKNPKVLSEGILWMVSAVEDFGVSHLKLKDLIDFCKDTGLQSSAAATRNA 782

Query: 429  TIKLIGALHKFIGSDIKGFLSDVKPALLSALDVEYEKNPFEGAFAVPKKTIKGAESTSSV 608
            TIKLIGALHKF+G DIKGFL+DVKPALLSALD EYEKNP+EGA AV KKT++ +ES SSV
Sbjct: 783  TIKLIGALHKFVGPDIKGFLTDVKPALLSALDAEYEKNPYEGASAVTKKTVRASESMSSV 842

Query: 609  SGG 617
            S G
Sbjct: 843  SAG 845


>emb|CBI25829.3| unnamed protein product [Vitis vinifera]
          Length = 975

 Score =  204 bits (518), Expect = 1e-50
 Identities = 103/123 (83%), Positives = 110/123 (89%)
 Frame = +3

Query: 249  FEYYGKIMKEHKNPKVLSEGLLWMVSAVEDFGVSLLKLKDLIDFCKDIGLQSRAAATRNA 428
            FE   KIMKEHKNPKVLSEG+LWMVSAVEDFGVS LKLKDLIDFCKD GLQS AAATRNA
Sbjct: 720  FERLYKIMKEHKNPKVLSEGILWMVSAVEDFGVSHLKLKDLIDFCKDTGLQSSAAATRNA 779

Query: 429  TIKLIGALHKFIGSDIKGFLSDVKPALLSALDVEYEKNPFEGAFAVPKKTIKGAESTSSV 608
            TIKLIGALHKF+G DIKGFL+DVKPALLSALD EYEKNP+EGA AV KKT++ +ES SSV
Sbjct: 780  TIKLIGALHKFVGPDIKGFLTDVKPALLSALDAEYEKNPYEGASAVTKKTVRASESMSSV 839

Query: 609  SGG 617
            S G
Sbjct: 840  SAG 842


>ref|XP_002300496.1| microtubule organization protein [Populus trichocarpa]
            gi|222847754|gb|EEE85301.1| microtubule organization
            protein [Populus trichocarpa]
          Length = 2036

 Score =  202 bits (513), Expect = 5e-50
 Identities = 98/123 (79%), Positives = 111/123 (90%)
 Frame = +3

Query: 249  FEYYGKIMKEHKNPKVLSEGLLWMVSAVEDFGVSLLKLKDLIDFCKDIGLQSRAAATRNA 428
            F+   KIMKEHKNPKVLSEG++WMVSA++DFGVS LKLKDLIDFCKD GLQS  AA+RNA
Sbjct: 726  FDRLYKIMKEHKNPKVLSEGIIWMVSAIDDFGVSHLKLKDLIDFCKDTGLQSSVAASRNA 785

Query: 429  TIKLIGALHKFIGSDIKGFLSDVKPALLSALDVEYEKNPFEGAFAVPKKTIKGAESTSSV 608
            TIKL+GALHKF+G DIKGFL+DVKPALLSALD EY+KNPFEGA A PKKT++ +ESTSSV
Sbjct: 786  TIKLLGALHKFVGPDIKGFLADVKPALLSALDAEYDKNPFEGASAAPKKTVRTSESTSSV 845

Query: 609  SGG 617
            SGG
Sbjct: 846  SGG 848


>ref|XP_002879562.1| hypothetical protein ARALYDRAFT_482523 [Arabidopsis lyrata subsp.
            lyrata] gi|297325401|gb|EFH55821.1| hypothetical protein
            ARALYDRAFT_482523 [Arabidopsis lyrata subsp. lyrata]
          Length = 1980

 Score =  198 bits (504), Expect = 6e-49
 Identities = 100/123 (81%), Positives = 109/123 (88%)
 Frame = +3

Query: 249  FEYYGKIMKEHKNPKVLSEGLLWMVSAVEDFGVSLLKLKDLIDFCKDIGLQSRAAATRNA 428
            FE   KIMKEHKNPKVLSEGLLWMVSAV+DFGVSLLKLKDLIDFCKD+GLQS  AATRNA
Sbjct: 720  FERLFKIMKEHKNPKVLSEGLLWMVSAVDDFGVSLLKLKDLIDFCKDVGLQSSTAATRNA 779

Query: 429  TIKLIGALHKFIGSDIKGFLSDVKPALLSALDVEYEKNPFEGAFAVPKKTIKGAESTSSV 608
            TIKL+GALHKF+G DIKGFL+DVKPALLSALD EYEKNPFEG  A PK+ +K + STS+ 
Sbjct: 780  TIKLLGALHKFVGPDIKGFLNDVKPALLSALDTEYEKNPFEGT-AAPKRVVKTSVSTSTS 838

Query: 609  SGG 617
            SGG
Sbjct: 839  SGG 841


>ref|NP_565811.2| microtubule organization 1 protein [Arabidopsis thaliana]
            gi|75250086|sp|Q94FN2.1|MOR1_ARATH RecName: Full=Protein
            MOR1; AltName: Full=Protein GEM1; AltName: Full=Protein
            GEMINI POLLEN 1; AltName: Full=Protein MICROTUBULE
            ORGANIZATION 1; AltName: Full=Protein RID5; AltName:
            Full=Protein ROOT INITIATION DEFECTIVE 5
            gi|14317953|gb|AAK59871.1|AF367246_1 microtubule
            organization 1 protein [Arabidopsis thaliana]
            gi|22252950|gb|AAM94170.1| MOR1/GEM1 [Arabidopsis
            thaliana] gi|330254039|gb|AEC09133.1| microtubule
            organization 1 protein [Arabidopsis thaliana]
          Length = 1978

 Score =  198 bits (504), Expect = 6e-49
 Identities = 100/123 (81%), Positives = 109/123 (88%)
 Frame = +3

Query: 249  FEYYGKIMKEHKNPKVLSEGLLWMVSAVEDFGVSLLKLKDLIDFCKDIGLQSRAAATRNA 428
            FE   KIMKEHKNPKVLSEGLLWMVSAV+DFGVSLLKLKDLIDFCKD+GLQS  AATRNA
Sbjct: 720  FERLFKIMKEHKNPKVLSEGLLWMVSAVDDFGVSLLKLKDLIDFCKDVGLQSSTAATRNA 779

Query: 429  TIKLIGALHKFIGSDIKGFLSDVKPALLSALDVEYEKNPFEGAFAVPKKTIKGAESTSSV 608
            TIKL+GALHKF+G DIKGFL+DVKPALLSALD EYEKNPFEG  A PK+ +K + STS+ 
Sbjct: 780  TIKLLGALHKFVGPDIKGFLNDVKPALLSALDTEYEKNPFEGT-AAPKRVVKTSVSTSTS 838

Query: 609  SGG 617
            SGG
Sbjct: 839  SGG 841


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