BLASTX nr result

ID: Panax21_contig00016470 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00016470
         (831 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002890790.1| ribosomal protein L34 family protein [Arabid...    93   6e-17
ref|NP_174202.1| 50S ribosomal protein L34 [Arabidopsis thaliana...    92   1e-16
emb|CBI30669.3| unnamed protein product [Vitis vinifera]               89   2e-15
ref|XP_002274637.1| PREDICTED: 50S ribosomal protein L34, chloro...    89   2e-15
emb|CAN60201.1| hypothetical protein VITISV_036402 [Vitis vinifera]    89   2e-15

>ref|XP_002890790.1| ribosomal protein L34 family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297336632|gb|EFH67049.1| ribosomal protein
           L34 family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 159

 Score = 93.2 bits (230), Expect = 6e-17
 Identities = 47/72 (65%), Positives = 53/72 (73%)
 Frame = -1

Query: 552 GITTEKSRGLVVRAGKAALCQTKRSRSRKSLARTHGFRKRMSTTXXXXXXXXXXXXXRWT 373
           G+ +++ RGLVVRAGKAALCQTKRSRSRKSLARTHGFR+RM TT             RW 
Sbjct: 87  GLNSQRHRGLVVRAGKAALCQTKRSRSRKSLARTHGFRRRMRTTSGRATIKRRRAKGRWN 146

Query: 372 LCTKSNHNSGKR 337
           LC KSN +SGKR
Sbjct: 147 LCPKSNPSSGKR 158


>ref|NP_174202.1| 50S ribosomal protein L34 [Arabidopsis thaliana]
           gi|75311421|sp|Q9LP37.1|RK34_ARATH RecName: Full=50S
           ribosomal protein L34, chloroplastic; AltName:
           Full=CL34; Flags: Precursor
           gi|9502428|gb|AAF88127.1|AC021043_20 Putative ribosomal
           protein L34 [Arabidopsis thaliana]
           gi|17380840|gb|AAL36232.1| putative plastid ribosomal
           protein L34 precursor [Arabidopsis thaliana]
           gi|20259639|gb|AAM14176.1| putative plastid ribosomal
           protein L34 precursor [Arabidopsis thaliana]
           gi|21536900|gb|AAM61232.1| plastid ribosomal protein L34
           precursor, putative [Arabidopsis thaliana]
           gi|332192918|gb|AEE31039.1| 50S ribosomal protein L34
           [Arabidopsis thaliana]
          Length = 157

 Score = 92.0 bits (227), Expect = 1e-16
 Identities = 47/72 (65%), Positives = 52/72 (72%)
 Frame = -1

Query: 552 GITTEKSRGLVVRAGKAALCQTKRSRSRKSLARTHGFRKRMSTTXXXXXXXXXXXXXRWT 373
           G+  ++ RGLVVRAGKAALCQTKRSRSRKSLARTHGFR+RM TT             RW 
Sbjct: 85  GLNGQRRRGLVVRAGKAALCQTKRSRSRKSLARTHGFRRRMRTTSGRATIKRRRAKGRWN 144

Query: 372 LCTKSNHNSGKR 337
           LC KSN +SGKR
Sbjct: 145 LCPKSNPSSGKR 156


>emb|CBI30669.3| unnamed protein product [Vitis vinifera]
          Length = 113

 Score = 88.6 bits (218), Expect = 2e-15
 Identities = 47/76 (61%), Positives = 53/76 (69%)
 Frame = -1

Query: 564 NFNHGITTEKSRGLVVRAGKAALCQTKRSRSRKSLARTHGFRKRMSTTXXXXXXXXXXXX 385
           N + G+  E+  GLVVRAGKAALCQTKR+RSRKSLARTHGFR+RM TT            
Sbjct: 37  NSSVGVRKERGHGLVVRAGKAALCQTKRNRSRKSLARTHGFRRRMRTTSGRAVLKRRRAK 96

Query: 384 XRWTLCTKSNHNSGKR 337
            R  LCTKSN +SGKR
Sbjct: 97  GRKVLCTKSNPSSGKR 112


>ref|XP_002274637.1| PREDICTED: 50S ribosomal protein L34, chloroplastic-like [Vitis
           vinifera]
          Length = 148

 Score = 88.6 bits (218), Expect = 2e-15
 Identities = 47/76 (61%), Positives = 53/76 (69%)
 Frame = -1

Query: 564 NFNHGITTEKSRGLVVRAGKAALCQTKRSRSRKSLARTHGFRKRMSTTXXXXXXXXXXXX 385
           N + G+  E+  GLVVRAGKAALCQTKR+RSRKSLARTHGFR+RM TT            
Sbjct: 72  NSSVGVRKERGHGLVVRAGKAALCQTKRNRSRKSLARTHGFRRRMRTTSGRAVLKRRRAK 131

Query: 384 XRWTLCTKSNHNSGKR 337
            R  LCTKSN +SGKR
Sbjct: 132 GRKVLCTKSNPSSGKR 147


>emb|CAN60201.1| hypothetical protein VITISV_036402 [Vitis vinifera]
          Length = 148

 Score = 88.6 bits (218), Expect = 2e-15
 Identities = 47/76 (61%), Positives = 53/76 (69%)
 Frame = -1

Query: 564 NFNHGITTEKSRGLVVRAGKAALCQTKRSRSRKSLARTHGFRKRMSTTXXXXXXXXXXXX 385
           N + G+  E+  GLVVRAGKAALCQTKR+RSRKSLARTHGFR+RM TT            
Sbjct: 72  NSSVGVRKERGHGLVVRAGKAALCQTKRNRSRKSLARTHGFRRRMRTTSGRAVLKRRRAK 131

Query: 384 XRWTLCTKSNHNSGKR 337
            R  LCTKSN +SGKR
Sbjct: 132 GRKVLCTKSNPSSGKR 147


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