BLASTX nr result

ID: Panax21_contig00016466 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00016466
         (1797 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320256.1| predicted protein [Populus trichocarpa] gi|2...   127   1e-26
ref|XP_002273891.2| PREDICTED: uncharacterized protein LOC100255...   126   2e-26
ref|XP_002515178.1| ribonuclease P, putative [Ricinus communis] ...   121   5e-25
gb|ACU22992.1| unknown [Glycine max]                                  108   4e-21
ref|XP_002874956.1| predicted protein [Arabidopsis lyrata subsp....   100   1e-18

>ref|XP_002320256.1| predicted protein [Populus trichocarpa] gi|222861029|gb|EEE98571.1|
           predicted protein [Populus trichocarpa]
          Length = 183

 Score =  127 bits (319), Expect = 1e-26
 Identities = 60/77 (77%), Positives = 72/77 (93%)
 Frame = -2

Query: 596 LNIQVILVASDCNPRWLTKHLPSLASSRKVPLIFVKDKKGGSLRLGELVKLKTAIAIGVK 417
           +++Q IL+ASDCNP+WLT+HLPSLASSRKVPLIFVKDK+GGSLRLGELVKLKTAIAIGVK
Sbjct: 98  VHLQAILIASDCNPKWLTRHLPSLASSRKVPLIFVKDKRGGSLRLGELVKLKTAIAIGVK 157

Query: 416 ARGNAINHLIENILGDQ 366
           ARGNAIN ++  + G++
Sbjct: 158 ARGNAINEIVGILCGNE 174


>ref|XP_002273891.2| PREDICTED: uncharacterized protein LOC100255449 [Vitis vinifera]
           gi|297744086|emb|CBI37056.3| unnamed protein product
           [Vitis vinifera]
          Length = 196

 Score =  126 bits (316), Expect = 2e-26
 Identities = 63/82 (76%), Positives = 70/82 (85%)
 Frame = -2

Query: 596 LNIQVILVASDCNPRWLTKHLPSLASSRKVPLIFVKDKKGGSLRLGELVKLKTAIAIGVK 417
           + +Q + VASD NPRWLTKHLPSLASSRKVPLIFVKDKKGGSLRLGELVKLKTAIAIG+K
Sbjct: 100 VRLQAVFVASDSNPRWLTKHLPSLASSRKVPLIFVKDKKGGSLRLGELVKLKTAIAIGIK 159

Query: 416 ARGNAINHLIENILGDQQVQGG 351
           AR N IN L+E IL  ++V  G
Sbjct: 160 ARENGINQLVEEILHGKEVNLG 181


>ref|XP_002515178.1| ribonuclease P, putative [Ricinus communis]
           gi|223545658|gb|EEF47162.1| ribonuclease P, putative
           [Ricinus communis]
          Length = 205

 Score =  121 bits (304), Expect = 5e-25
 Identities = 56/74 (75%), Positives = 69/74 (93%)
 Frame = -2

Query: 596 LNIQVILVASDCNPRWLTKHLPSLASSRKVPLIFVKDKKGGSLRLGELVKLKTAIAIGVK 417
           + IQVIL+ASD NP+WLTKHLPSLASSRK+P+IFV+DKKGGSLRLGELV LKTAIA+G+K
Sbjct: 108 VRIQVILIASDSNPKWLTKHLPSLASSRKIPVIFVRDKKGGSLRLGELVNLKTAIALGIK 167

Query: 416 ARGNAINHLIENIL 375
           A+GN+IN ++E +L
Sbjct: 168 AKGNSINQIVEEML 181


>gb|ACU22992.1| unknown [Glycine max]
          Length = 195

 Score =  108 bits (271), Expect = 4e-21
 Identities = 50/74 (67%), Positives = 64/74 (86%)
 Frame = -2

Query: 596 LNIQVILVASDCNPRWLTKHLPSLASSRKVPLIFVKDKKGGSLRLGELVKLKTAIAIGVK 417
           + +Q +LVASDCNPRWLTKHL SLASSR VPL+FV+D K GSLRLGELV+L+TAIAIG+K
Sbjct: 104 VKLQAVLVASDCNPRWLTKHLLSLASSRNVPLVFVRDTKQGSLRLGELVQLETAIAIGIK 163

Query: 416 ARGNAINHLIENIL 375
            +G+ IN +I+ ++
Sbjct: 164 VKGSTINKIIQQVI 177


>ref|XP_002874956.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297320793|gb|EFH51215.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 170

 Score =  100 bits (250), Expect = 1e-18
 Identities = 45/74 (60%), Positives = 63/74 (85%)
 Frame = -2

Query: 596 LNIQVILVASDCNPRWLTKHLPSLASSRKVPLIFVKDKKGGSLRLGELVKLKTAIAIGVK 417
           + +QV++V +DC PR LTKH+P+LA+SR VP+++++D K  SLRLGELVKLKTA+AIGVK
Sbjct: 93  VQLQVVIVVADCKPRTLTKHIPNLAASRNVPVLYIRDNKRASLRLGELVKLKTALAIGVK 152

Query: 416 ARGNAINHLIENIL 375
           ARGN +N +++ IL
Sbjct: 153 ARGNDLNLILQQIL 166


Top