BLASTX nr result
ID: Panax21_contig00016463
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00016463
(377 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum ... 97 5e-32
gb|ABA95820.1| retrotransposon protein, putative, unclassified [... 94 2e-29
gb|AAP46257.1| putative polyprotein [Oryza sativa Japonica Group... 92 2e-29
gb|ABA99612.1| retrotransposon protein, putative, unclassified [... 92 2e-29
gb|AAL58228.1|AC084762_2 putative gag-pol polyprotein [Oryza sat... 91 1e-28
>gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum demissum]
Length = 1333
Score = 97.1 bits (240), Expect(3) = 5e-32
Identities = 46/74 (62%), Positives = 60/74 (81%), Gaps = 1/74 (1%)
Frame = +1
Query: 157 FRRSEKEPTLYVKVKGND-VLIVCVYVDDMIYMGSSNALVREFKESMMSEFDMTDLGLLY 333
FRRS+ EPTLY+K +G D L+VC+YVDDMIY+GSS +LV +FK +MM F+M+DLGLL
Sbjct: 988 FRRSDNEPTLYLKKQGTDEFLLVCLYVDDMIYIGSSKSLVNDFKSNMMRNFEMSDLGLLK 1047
Query: 334 YFLGLQI*QTNEGI 375
YFLGL++ Q +GI
Sbjct: 1048 YFLGLEVIQDKDGI 1061
Score = 62.0 bits (149), Expect(3) = 5e-32
Identities = 28/48 (58%), Positives = 34/48 (70%)
Frame = +2
Query: 41 GIVINGQEDKVYKLKKALYGLKQTPRAWYSRLDSSFKMISVEVKKNPP 184
G +I G E+KVYKL+KALYGLKQ PRAWYS++DS F+ N P
Sbjct: 948 GFMITGNENKVYKLRKALYGLKQAPRAWYSKIDSFFQGSGFRRSDNEP 995
Score = 24.3 bits (51), Expect(3) = 5e-32
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +3
Query: 9 LDEDVYVKQPQG 44
L+E+VYV QPQG
Sbjct: 937 LEEEVYVSQPQG 948
>gb|ABA95820.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1142
Score = 93.6 bits (231), Expect(3) = 2e-29
Identities = 41/77 (53%), Positives = 60/77 (77%)
Frame = +1
Query: 145 LQNDFRRSEKEPTLYVKVKGNDVLIVCVYVDDMIYMGSSNALVREFKESMMSEFDMTDLG 324
+Q F +S EPTLYV G D+LIV +YVDD+IY G+S ++++FK+ MM ++M+DLG
Sbjct: 801 IQKGFAKSISEPTLYVNKTGTDILIVSLYVDDLIYTGNSEKMMQDFKKDMMHTYEMSDLG 860
Query: 325 LLYYFLGLQI*QTNEGI 375
LLYYFLG+++ Q++EGI
Sbjct: 861 LLYYFLGMEVHQSDEGI 877
Score = 53.5 bits (127), Expect(3) = 2e-29
Identities = 22/36 (61%), Positives = 28/36 (77%)
Frame = +2
Query: 41 GIVINGQEDKVYKLKKALYGLKQTPRAWYSRLDSSF 148
G + G E+KV++LKKALYGLKQ PR WYS++D F
Sbjct: 765 GFSVQGGENKVFRLKKALYGLKQAPRVWYSQIDKYF 800
Score = 27.3 bits (59), Expect(3) = 2e-29
Identities = 9/15 (60%), Positives = 14/15 (93%)
Frame = +3
Query: 6 FLDEDVYVKQPQGLS 50
+LDE++YV+QP+G S
Sbjct: 753 YLDEEIYVEQPEGFS 767
>gb|AAP46257.1| putative polyprotein [Oryza sativa Japonica Group]
gi|108711922|gb|ABF99717.1| retrotransposon protein,
putative, unclassified [Oryza sativa Japonica Group]
Length = 1335
Score = 91.7 bits (226), Expect(3) = 2e-29
Identities = 40/77 (51%), Positives = 60/77 (77%)
Frame = +1
Query: 145 LQNDFRRSEKEPTLYVKVKGNDVLIVCVYVDDMIYMGSSNALVREFKESMMSEFDMTDLG 324
+Q F +S EPTLYV G D+LIV +YVDD+IY G+S ++++FK+ MM ++M+DLG
Sbjct: 1011 IQKGFAKSISEPTLYVNKTGTDILIVSLYVDDLIYTGNSEKMMQDFKKDMMHTYEMSDLG 1070
Query: 325 LLYYFLGLQI*QTNEGI 375
LL+YFLG+++ Q++EGI
Sbjct: 1071 LLHYFLGMEVHQSDEGI 1087
Score = 55.1 bits (131), Expect(3) = 2e-29
Identities = 23/36 (63%), Positives = 29/36 (80%)
Frame = +2
Query: 41 GIVINGQEDKVYKLKKALYGLKQTPRAWYSRLDSSF 148
G + G E+KV++LKKALYGLKQ PRAWYS++D F
Sbjct: 975 GFSVQGGENKVFRLKKALYGLKQAPRAWYSQIDKYF 1010
Score = 27.3 bits (59), Expect(3) = 2e-29
Identities = 9/15 (60%), Positives = 14/15 (93%)
Frame = +3
Query: 6 FLDEDVYVKQPQGLS 50
+LDE++YV+QP+G S
Sbjct: 963 YLDEEIYVEQPEGFS 977
>gb|ABA99612.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1198
Score = 91.7 bits (226), Expect(3) = 2e-29
Identities = 40/77 (51%), Positives = 60/77 (77%)
Frame = +1
Query: 145 LQNDFRRSEKEPTLYVKVKGNDVLIVCVYVDDMIYMGSSNALVREFKESMMSEFDMTDLG 324
+Q F +S EPTLYV G D+LIV +YVDD+IY G+S ++++FK+ MM ++M+DLG
Sbjct: 874 IQKGFAKSISEPTLYVNKTGTDILIVSLYVDDLIYTGNSEKMMQDFKKDMMHTYEMSDLG 933
Query: 325 LLYYFLGLQI*QTNEGI 375
LL+YFLG+++ Q++EGI
Sbjct: 934 LLHYFLGMEVHQSDEGI 950
Score = 55.1 bits (131), Expect(3) = 2e-29
Identities = 23/36 (63%), Positives = 29/36 (80%)
Frame = +2
Query: 41 GIVINGQEDKVYKLKKALYGLKQTPRAWYSRLDSSF 148
G + G E+KV++LKKALYGLKQ PRAWYS++D F
Sbjct: 838 GFSVQGGENKVFRLKKALYGLKQAPRAWYSQIDKYF 873
Score = 27.3 bits (59), Expect(3) = 2e-29
Identities = 9/15 (60%), Positives = 14/15 (93%)
Frame = +3
Query: 6 FLDEDVYVKQPQGLS 50
+LDE++YV+QP+G S
Sbjct: 826 YLDEEIYVEQPEGFS 840
>gb|AAL58228.1|AC084762_2 putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|108708461|gb|ABF96256.1| retrotransposon protein,
putative, unclassified [Oryza sativa Japonica Group]
Length = 1167
Score = 90.9 bits (224), Expect(3) = 1e-28
Identities = 39/77 (50%), Positives = 59/77 (76%)
Frame = +1
Query: 145 LQNDFRRSEKEPTLYVKVKGNDVLIVCVYVDDMIYMGSSNALVREFKESMMSEFDMTDLG 324
+Q F +S EPTLY+ G D+LIV +YVDD+IY G+S ++++FK MM ++M+DLG
Sbjct: 843 IQKGFAKSISEPTLYINKTGTDILIVSLYVDDLIYTGNSEKMMQDFKRDMMHTYEMSDLG 902
Query: 325 LLYYFLGLQI*QTNEGI 375
LL+YFLG+++ Q++EGI
Sbjct: 903 LLHYFLGMEVHQSDEGI 919
Score = 53.5 bits (127), Expect(3) = 1e-28
Identities = 22/36 (61%), Positives = 28/36 (77%)
Frame = +2
Query: 41 GIVINGQEDKVYKLKKALYGLKQTPRAWYSRLDSSF 148
G + G E+KV++LKKALYGLKQ PR WYS++D F
Sbjct: 807 GFSVQGGENKVFRLKKALYGLKQAPRVWYSQIDKYF 842
Score = 27.3 bits (59), Expect(3) = 1e-28
Identities = 9/15 (60%), Positives = 14/15 (93%)
Frame = +3
Query: 6 FLDEDVYVKQPQGLS 50
+LDE++YV+QP+G S
Sbjct: 795 YLDEEIYVEQPEGFS 809