BLASTX nr result

ID: Panax21_contig00016460 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00016460
         (1725 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520196.1| conserved hypothetical protein [Ricinus comm...   620   e-175
ref|XP_002314629.1| SIN3 component, histone deacetylase complex ...   616   e-174
ref|XP_002267856.2| PREDICTED: paired amphipathic helix protein ...   597   e-168
emb|CBI32068.3| unnamed protein product [Vitis vinifera]              597   e-168
ref|XP_002311786.1| SIN3 component, histone deacetylase complex ...   593   e-167

>ref|XP_002520196.1| conserved hypothetical protein [Ricinus communis]
            gi|223540688|gb|EEF42251.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1452

 Score =  620 bits (1600), Expect = e-175
 Identities = 311/444 (70%), Positives = 353/444 (79%), Gaps = 4/444 (0%)
 Frame = +1

Query: 1    FEEDNFQAYGDSATEAAHRLKSSATSVQYQARXXXXXXXXXXXXXXXXDADEEGEESAHR 180
            FEEDNF AYG++ +EA H+ K +A + QYQ R                DAD+EG+ESAHR
Sbjct: 1017 FEEDNFAAYGEAGSEAVHKAKENAVNRQYQTRHGEEETCGEAGGENDADADDEGDESAHR 1076

Query: 181  SSDDSENASENGDASGSESADGEDCSREEHEEIGDPKEHDTKAESEGEAEGMTDAHDAEG 360
            SS+DSENASENG+ SGSES DGEDCSREEHEE G+  EHD KAESEGEAEGM DAHD EG
Sbjct: 1077 SSEDSENASENGEVSGSESGDGEDCSREEHEEAGEHDEHDNKAESEGEAEGMADAHDVEG 1136

Query: 361  DGTLLPFPERFLQSVKPFTMHVAPLLRDKENGSQIFYGNDSFYILFRLHQTLYDRIKSAK 540
            +GT+LPF ERFL +VKP   HV P L DK+ GS++FYGNDSFY+LFRLHQTLY+RI+SAK
Sbjct: 1137 EGTMLPFSERFLLNVKPLAKHVPPALHDKDKGSRVFYGNDSFYVLFRLHQTLYERIQSAK 1196

Query: 541  ---SSAEKNWRGSNDTTPTDLFARFMNAFYSLLDGSSDNTKFEDDCRAMMGAQSYVLFTL 711
               SSAE+ WR SNDT PTDL+ARFM+A Y+LLDGSSDNTKFEDDCRA++G QSYVLFTL
Sbjct: 1197 INSSSAERKWRASNDTNPTDLYARFMSALYNLLDGSSDNTKFEDDCRAIIGTQSYVLFTL 1256

Query: 712  DKLIYKLVKQLQIVATDEMDNKLLQLYAYEKSRSCGSFVDVVYHDNARALLHDENIYRVE 891
            DKLIYKLVKQLQ VA+DEMDNKLLQLYAYEKSR  G F+DVVYH+NAR LLHDENIYR+E
Sbjct: 1257 DKLIYKLVKQLQTVASDEMDNKLLQLYAYEKSRKPGRFIDVVYHENARILLHDENIYRIE 1316

Query: 892  CSSAPLHLSIQLMDYGFEKPEVTAVSMDPNFASYMNNDFLSLVPDKKEKPGIALKRNKRK 1071
            C S P HLSIQLMD+G +KPEVTAVSMDPNFA+Y++N+FLS+VPDKKEK GI LKRNK +
Sbjct: 1317 CCSTPTHLSIQLMDFGHDKPEVTAVSMDPNFAAYLHNEFLSIVPDKKEKSGIFLKRNKHR 1376

Query: 1072 FACGDEISITCQAMEGLQIFNGLECKIACNSYKVSYVLDTEDFLCRTKRR-RTLHQNGTS 1248
                DE     Q MEG Q+ NGLECKIACNS KVSYVLDTEDFL RTKRR RT   N + 
Sbjct: 1377 CGSHDE----SQTMEGFQVLNGLECKIACNSSKVSYVLDTEDFLFRTKRRKRTPQPNSSC 1432

Query: 1249 HDQTNPSNGGLARVQQFHRLLYGS 1320
            HDQT  S     +V+QFHR L  S
Sbjct: 1433 HDQTKISK----KVEQFHRWLSSS 1452


>ref|XP_002314629.1| SIN3 component, histone deacetylase complex [Populus trichocarpa]
            gi|222863669|gb|EEF00800.1| SIN3 component, histone
            deacetylase complex [Populus trichocarpa]
          Length = 1385

 Score =  616 bits (1589), Expect = e-174
 Identities = 316/441 (71%), Positives = 352/441 (79%), Gaps = 4/441 (0%)
 Frame = +1

Query: 1    FEEDNFQAYGDSATEAAHRLKSSATSVQYQARXXXXXXXXXXXXXXXXDADEEGEESAHR 180
            FEEDNF  YG++  EAAH+ K SA   +  A                 DAD+EG+ESA R
Sbjct: 967  FEEDNFAFYGEAGLEAAHKAKDSAVRGENDA-----------------DADDEGDESAQR 1009

Query: 181  SSDDSENASENGDASGSESADGEDCSREEHEEIGDPKEHDTKAESEGEAEGMTDAHDAEG 360
            S++DSENASENGD SGSES DGEDCSREEHEE GD  EHD KAESEGEAEGM DAHD EG
Sbjct: 1010 STEDSENASENGDVSGSESGDGEDCSREEHEEDGDHDEHDIKAESEGEAEGMADAHDVEG 1069

Query: 361  DGTLLPFPERFLQSVKPFTMHVAPLLRDKENGSQIFYGNDSFYILFRLHQTLYDRIKSAK 540
            DGT+LPF ERFL +VKP   HV P L DKE  S++FYGNDSFY+LFRLHQTLY+RI+SAK
Sbjct: 1070 DGTMLPFSERFLLNVKPLAKHVPPSLHDKEKVSRVFYGNDSFYVLFRLHQTLYERIQSAK 1129

Query: 541  ---SSAEKNWRGSNDTTPTDLFARFMNAFYSLLDGSSDNTKFEDDCRAMMGAQSYVLFTL 711
               SSAE+ WR SNDT+PTDL+ARFM+A Y+LLDGSSDNTKFEDDCRA++G QSYVLFTL
Sbjct: 1130 VNSSSAERKWRASNDTSPTDLYARFMSALYNLLDGSSDNTKFEDDCRAIIGTQSYVLFTL 1189

Query: 712  DKLIYKLVKQLQIVATDEMDNKLLQLYAYEKSRSCGSFVDVVYHDNARALLHDENIYRVE 891
            DKLIYKLVKQLQ VA DEMDNKLLQLYAYEKSR  G  VD+VYH+NAR LLHDENIYR+E
Sbjct: 1190 DKLIYKLVKQLQTVAADEMDNKLLQLYAYEKSRKPGRLVDIVYHENARVLLHDENIYRIE 1249

Query: 892  CSSAPLHLSIQLMDYGFEKPEVTAVSMDPNFASYMNNDFLSLVPDKKEKPGIALKRNKRK 1071
            CSSAP HLSIQLMD+G +KPEVTAVSMDPNFASY+ NDFL +VPDKKEKPGI LKRNKR+
Sbjct: 1250 CSSAPTHLSIQLMDFGHDKPEVTAVSMDPNFASYLLNDFLPVVPDKKEKPGIFLKRNKRR 1309

Query: 1072 FACGDEISITCQAMEGLQIFNGLECKIACNSYKVSYVLDTEDFLCRTKRR-RTLHQNGTS 1248
             A  DE    CQAMEG ++FNGLECKIACNS KVSYVLDTEDFL RT R+ RTL QNG+ 
Sbjct: 1310 NANSDE----CQAMEGFRVFNGLECKIACNSSKVSYVLDTEDFLFRTGRKSRTLQQNGSC 1365

Query: 1249 HDQTNPSNGGLARVQQFHRLL 1311
            H+Q   S     RVQ+FHR L
Sbjct: 1366 HNQEKISK----RVQRFHRWL 1382


>ref|XP_002267856.2| PREDICTED: paired amphipathic helix protein Sin3-like 4-like [Vitis
            vinifera]
          Length = 1421

 Score =  597 bits (1538), Expect = e-168
 Identities = 303/430 (70%), Positives = 345/430 (80%), Gaps = 5/430 (1%)
 Frame = +1

Query: 1    FEEDNFQAYGDSATEAAHRLKSSATSVQYQARXXXXXXXXXXXXXXXX-DADEEGEESAH 177
            FEEDNF  YGD+  E   + K +A S QYQ R                 DAD+EGEESA 
Sbjct: 975  FEEDNFAVYGDAGVEG--KSKDTAASRQYQTRHGVEEICCGEAGGENDADADDEGEESAQ 1032

Query: 178  RSSDDSENASENGDASGSESADGEDCSREEHEEIGDPKEHDTKAESEGEAEGMTDAHDAE 357
            RSS+DSENASENGD SGSES +GE+CSREEHEE GD  EHD KAESEGEAEGM DAHD E
Sbjct: 1033 RSSEDSENASENGDVSGSESGEGEECSREEHEEDGDHDEHDNKAESEGEAEGMADAHDVE 1092

Query: 358  GDGTLLPFPERFLQSVKPFTMHVAPLLRDKENGSQIFYGNDSFYILFRLHQTLYDRIKSA 537
            GDGTLLPF ERFL +VKP   HV P L+DKE  S++FYGNDSFY+LFRLHQTLY+R++SA
Sbjct: 1093 GDGTLLPFSERFLLTVKPLAKHVPPSLQDKEKNSRVFYGNDSFYVLFRLHQTLYERMQSA 1152

Query: 538  K---SSAEKNWRGSNDTTPTDLFARFMNAFYSLLDGSSDNTKFEDDCRAMMGAQSYVLFT 708
            K   SS E+ WR S+DT  TDL+ARFMNA Y+LLDGSSDNTKFEDDCRA++G QSYVLFT
Sbjct: 1153 KLNSSSGERKWRASSDTNSTDLYARFMNALYNLLDGSSDNTKFEDDCRAIIGTQSYVLFT 1212

Query: 709  LDKLIYKLVKQLQIVATDEMDNKLLQLYAYEKSRSCGSFVDVVYHDNARALLHDENIYRV 888
            LDKLIYKLVKQLQ VATDEMDNKLLQLYAYEKSR  G FVD+VY++N+R LLHDENIYR+
Sbjct: 1213 LDKLIYKLVKQLQTVATDEMDNKLLQLYAYEKSRKPGRFVDMVYYENSRVLLHDENIYRI 1272

Query: 889  ECSSAPLHLSIQLMDYGFEKPEVTAVSMDPNFASYMNNDFLSLVPDKKEKPGIALKRNKR 1068
            ECSSAP HL+IQLMD G +KPEVTAVSMDPNFA+Y+N+DFLS+V +KK K GI L+RNKR
Sbjct: 1273 ECSSAPTHLTIQLMDNGHDKPEVTAVSMDPNFAAYLNSDFLSVVNEKK-KSGIFLRRNKR 1331

Query: 1069 KFACGDEISITCQAMEGLQIFNGLECKIACNSYKVSYVLDTEDFLCRT-KRRRTLHQNGT 1245
            K+A GDE S+ CQAMEGLQ+ NGLECKIAC+S KVSYVLDTEDFL R  K+R+T  +  +
Sbjct: 1332 KYARGDEFSVACQAMEGLQVVNGLECKIACSSSKVSYVLDTEDFLFRVRKKRKTSVRKSS 1391

Query: 1246 SHDQTNPSNG 1275
             HDQ   SNG
Sbjct: 1392 CHDQAKSSNG 1401


>emb|CBI32068.3| unnamed protein product [Vitis vinifera]
          Length = 1445

 Score =  597 bits (1538), Expect = e-168
 Identities = 303/430 (70%), Positives = 345/430 (80%), Gaps = 5/430 (1%)
 Frame = +1

Query: 1    FEEDNFQAYGDSATEAAHRLKSSATSVQYQARXXXXXXXXXXXXXXXX-DADEEGEESAH 177
            FEEDNF  YGD+  E   + K +A S QYQ R                 DAD+EGEESA 
Sbjct: 999  FEEDNFAVYGDAGVEG--KSKDTAASRQYQTRHGVEEICCGEAGGENDADADDEGEESAQ 1056

Query: 178  RSSDDSENASENGDASGSESADGEDCSREEHEEIGDPKEHDTKAESEGEAEGMTDAHDAE 357
            RSS+DSENASENGD SGSES +GE+CSREEHEE GD  EHD KAESEGEAEGM DAHD E
Sbjct: 1057 RSSEDSENASENGDVSGSESGEGEECSREEHEEDGDHDEHDNKAESEGEAEGMADAHDVE 1116

Query: 358  GDGTLLPFPERFLQSVKPFTMHVAPLLRDKENGSQIFYGNDSFYILFRLHQTLYDRIKSA 537
            GDGTLLPF ERFL +VKP   HV P L+DKE  S++FYGNDSFY+LFRLHQTLY+R++SA
Sbjct: 1117 GDGTLLPFSERFLLTVKPLAKHVPPSLQDKEKNSRVFYGNDSFYVLFRLHQTLYERMQSA 1176

Query: 538  K---SSAEKNWRGSNDTTPTDLFARFMNAFYSLLDGSSDNTKFEDDCRAMMGAQSYVLFT 708
            K   SS E+ WR S+DT  TDL+ARFMNA Y+LLDGSSDNTKFEDDCRA++G QSYVLFT
Sbjct: 1177 KLNSSSGERKWRASSDTNSTDLYARFMNALYNLLDGSSDNTKFEDDCRAIIGTQSYVLFT 1236

Query: 709  LDKLIYKLVKQLQIVATDEMDNKLLQLYAYEKSRSCGSFVDVVYHDNARALLHDENIYRV 888
            LDKLIYKLVKQLQ VATDEMDNKLLQLYAYEKSR  G FVD+VY++N+R LLHDENIYR+
Sbjct: 1237 LDKLIYKLVKQLQTVATDEMDNKLLQLYAYEKSRKPGRFVDMVYYENSRVLLHDENIYRI 1296

Query: 889  ECSSAPLHLSIQLMDYGFEKPEVTAVSMDPNFASYMNNDFLSLVPDKKEKPGIALKRNKR 1068
            ECSSAP HL+IQLMD G +KPEVTAVSMDPNFA+Y+N+DFLS+V +KK K GI L+RNKR
Sbjct: 1297 ECSSAPTHLTIQLMDNGHDKPEVTAVSMDPNFAAYLNSDFLSVVNEKK-KSGIFLRRNKR 1355

Query: 1069 KFACGDEISITCQAMEGLQIFNGLECKIACNSYKVSYVLDTEDFLCRT-KRRRTLHQNGT 1245
            K+A GDE S+ CQAMEGLQ+ NGLECKIAC+S KVSYVLDTEDFL R  K+R+T  +  +
Sbjct: 1356 KYARGDEFSVACQAMEGLQVVNGLECKIACSSSKVSYVLDTEDFLFRVRKKRKTSVRKSS 1415

Query: 1246 SHDQTNPSNG 1275
             HDQ   SNG
Sbjct: 1416 CHDQAKSSNG 1425


>ref|XP_002311786.1| SIN3 component, histone deacetylase complex [Populus trichocarpa]
            gi|222851606|gb|EEE89153.1| SIN3 component, histone
            deacetylase complex [Populus trichocarpa]
          Length = 1343

 Score =  593 bits (1529), Expect = e-167
 Identities = 309/463 (66%), Positives = 349/463 (75%), Gaps = 23/463 (4%)
 Frame = +1

Query: 1    FEEDNFQAYGDSATEAAHRLKSSATSVQYQARXXXXXXXXXXXXXXXXDADEEGEESAHR 180
            FEEDNF  YG++  EAAH+ +    +                      DAD+EG ESA R
Sbjct: 903  FEEDNFAVYGEAGLEAAHKGEECGEA----------------GGENDADADDEGGESAQR 946

Query: 181  SSDDSENASENGDASGSESADGEDCSREEHEEIGDPKEHDTKAESEGEAEGMTDAHDAEG 360
            SS+DSENASENGD SGSES DGEDCSREEHEE GD  EHD KAESEGEAEGM DAHD EG
Sbjct: 947  SSEDSENASENGDVSGSESGDGEDCSREEHEEDGDHDEHDNKAESEGEAEGMADAHDVEG 1006

Query: 361  DGTLLPFPERFLQSVKPFTMHVAPLLRDKENGSQIFYGNDSFYILFRLHQTLYDRIKSAK 540
            +GT+LPF ERFL +VKP   HV P L DKE G ++FYGNDSFY+LFRLHQTLY+RI+SAK
Sbjct: 1007 EGTILPFSERFLLNVKPLAKHVPPSLHDKEKGFRVFYGNDSFYVLFRLHQTLYERIQSAK 1066

Query: 541  ---SSAEKNWRGSNDTTPTDLFARFMNAFYSLLDGSSDNTKFEDDCRAMMGAQSYVLFTL 711
               SSAE+ WR SNDT+PTDL+ARFM+A Y+LLDGSSDNTKFEDDCRA++G QSYVLFTL
Sbjct: 1067 VNSSSAERKWRASNDTSPTDLYARFMSALYNLLDGSSDNTKFEDDCRAIIGTQSYVLFTL 1126

Query: 712  DKLIYKLVK-------------------QLQIVATDEMDNKLLQLYAYEKSRSCGSFVDV 834
            DKLIYKLVK                   QLQ VATDEMDNKLLQLYAYEKSR  G FVD+
Sbjct: 1127 DKLIYKLVKQSSAFLDLISSHQVLFYFPQLQTVATDEMDNKLLQLYAYEKSRKHGRFVDI 1186

Query: 835  VYHDNARALLHDENIYRVECSSAPLHLSIQLMDYGFEKPEVTAVSMDPNFASYMNNDFLS 1014
            V H+NAR LLHDENIYR+ECSSAP  LSIQLMD+G +KPEVTAVSMDPNFASY++NDFLS
Sbjct: 1187 VCHENARVLLHDENIYRIECSSAPTRLSIQLMDFGHDKPEVTAVSMDPNFASYLHNDFLS 1246

Query: 1015 LVPDKKEKPGIALKRNKRKFACGDEISITCQAMEGLQIFNGLECKIACNSYKVSYVLDTE 1194
            +VPDKKEKPGI LKRNK +++  DE    CQAMEG ++ NGLECKIACNS KVSYVLDTE
Sbjct: 1247 VVPDKKEKPGIFLKRNKHRYSDADE----CQAMEGFRVLNGLECKIACNSSKVSYVLDTE 1302

Query: 1195 DFLCR-TKRRRTLHQNGTSHDQTNPSNGGLARVQQFHRLLYGS 1320
            DFL R  K+ +TL QNG+ HD     +    RVQ+FHRLL  S
Sbjct: 1303 DFLFRPQKKSKTLQQNGSCHDDQAKIS---KRVQRFHRLLSSS 1342


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