BLASTX nr result

ID: Panax21_contig00016453 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00016453
         (452 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519286.1| dihydrolipoamide dehydrogenase, putative [Ri...   166   2e-39
gb|ACJ11739.1| dihydrolipoamide dehydrogenase [Gossypium hirsutum]    155   3e-36
ref|XP_002311367.1| precursor of dehydrogenase dihydrolipoamide ...   154   5e-36
gb|ABO61735.1| mitochondrial lipoamide dehydrogenase [Populus tr...   154   5e-36
gb|ABK96408.1| unknown [Populus trichocarpa x Populus deltoides]      154   5e-36

>ref|XP_002519286.1| dihydrolipoamide dehydrogenase, putative [Ricinus communis]
           gi|223541601|gb|EEF43150.1| dihydrolipoamide
           dehydrogenase, putative [Ricinus communis]
          Length = 510

 Score =  166 bits (419), Expect = 2e-39
 Identities = 89/116 (76%), Positives = 93/116 (80%), Gaps = 1/116 (0%)
 Frame = +2

Query: 107 MSMASFARRKGTLLSRHLSNFSNKSADAFRYSFSLTSFSRAFASS-SDENDXXXXXXXXX 283
           M+MASFARRK  LL+R   NFSN S DA RYSFSLTSFSR FAS+ SDEND         
Sbjct: 1   MAMASFARRKAYLLTR---NFSNSSPDALRYSFSLTSFSRGFASAGSDENDVVVVGGGPG 57

Query: 284 XXXAAIKAAQLGLKTTCIEKRVTLGGTCLNVGCIPSKALLHSSHMYHEAKHSFANH 451
              AAIKAAQLGLKTTCIEKR TLGGTCLNVGCIPSKALLHSSHMYHEA+HSFANH
Sbjct: 58  GYVAAIKAAQLGLKTTCIEKRGTLGGTCLNVGCIPSKALLHSSHMYHEAQHSFANH 113


>gb|ACJ11739.1| dihydrolipoamide dehydrogenase [Gossypium hirsutum]
          Length = 509

 Score =  155 bits (392), Expect = 3e-36
 Identities = 81/115 (70%), Positives = 87/115 (75%)
 Frame = +2

Query: 107 MSMASFARRKGTLLSRHLSNFSNKSADAFRYSFSLTSFSRAFASSSDENDXXXXXXXXXX 286
           M++AS  RRK  LLSR   N SN  ADA +YSFSL++FSR FAS S+END          
Sbjct: 1   MALASLVRRKAYLLSR---NLSNSPADALKYSFSLSNFSRGFASGSEENDVVVIGGGPGG 57

Query: 287 XXAAIKAAQLGLKTTCIEKRVTLGGTCLNVGCIPSKALLHSSHMYHEAKHSFANH 451
             AAIKAAQLGLKTTCIEKR TLGGTCLNVGCIPSKALLHSSHMYHEA HSFA H
Sbjct: 58  YVAAIKAAQLGLKTTCIEKRGTLGGTCLNVGCIPSKALLHSSHMYHEATHSFAGH 112


>ref|XP_002311367.1| precursor of dehydrogenase dihydrolipoamide dehydrogenase 1
           [Populus trichocarpa] gi|222851187|gb|EEE88734.1|
           precursor of dehydrogenase dihydrolipoamide
           dehydrogenase 1 [Populus trichocarpa]
          Length = 511

 Score =  154 bits (390), Expect = 5e-36
 Identities = 82/116 (70%), Positives = 93/116 (80%), Gaps = 1/116 (0%)
 Frame = +2

Query: 107 MSMASFARRKGTLLSRHLSNFSNKSADAFRYSFSLTSFSRAFASS-SDENDXXXXXXXXX 283
           M+MAS ARRK   L+R+LSN S  SADAF++S+SLT FSR FA+S S+END         
Sbjct: 1   MAMASIARRKACFLTRNLSNSS--SADAFKFSYSLTKFSRGFATSGSEENDVVVIGGGPG 58

Query: 284 XXXAAIKAAQLGLKTTCIEKRVTLGGTCLNVGCIPSKALLHSSHMYHEAKHSFANH 451
              AAIKAAQLGLKTTCIEKR TLGGTCLNVGCIPSKALLHSSHM+HEA+HSFA+H
Sbjct: 59  GYVAAIKAAQLGLKTTCIEKRGTLGGTCLNVGCIPSKALLHSSHMFHEAQHSFASH 114


>gb|ABO61735.1| mitochondrial lipoamide dehydrogenase [Populus tremuloides]
          Length = 511

 Score =  154 bits (390), Expect = 5e-36
 Identities = 82/116 (70%), Positives = 93/116 (80%), Gaps = 1/116 (0%)
 Frame = +2

Query: 107 MSMASFARRKGTLLSRHLSNFSNKSADAFRYSFSLTSFSRAFASS-SDENDXXXXXXXXX 283
           M+MAS ARRK   L+R+LSN S  SADAF++S+SLT FSR FA+S S+END         
Sbjct: 1   MAMASIARRKALFLTRNLSNSS--SADAFKFSYSLTKFSRGFATSGSEENDVVIIGGGPG 58

Query: 284 XXXAAIKAAQLGLKTTCIEKRVTLGGTCLNVGCIPSKALLHSSHMYHEAKHSFANH 451
              AAIKAAQLGLKTTCIEKR TLGGTCLNVGCIPSKALLHSSHM+HEA+HSFA+H
Sbjct: 59  GYVAAIKAAQLGLKTTCIEKRGTLGGTCLNVGCIPSKALLHSSHMFHEAQHSFASH 114


>gb|ABK96408.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 511

 Score =  154 bits (390), Expect = 5e-36
 Identities = 82/116 (70%), Positives = 93/116 (80%), Gaps = 1/116 (0%)
 Frame = +2

Query: 107 MSMASFARRKGTLLSRHLSNFSNKSADAFRYSFSLTSFSRAFASS-SDENDXXXXXXXXX 283
           M+MAS ARRK   L+R+LSN S  SADAF++S+SLT FSR FA+S S+END         
Sbjct: 1   MAMASIARRKACFLTRNLSNSS--SADAFKFSYSLTKFSRGFATSGSEENDVVVIGGGPG 58

Query: 284 XXXAAIKAAQLGLKTTCIEKRVTLGGTCLNVGCIPSKALLHSSHMYHEAKHSFANH 451
              AAIKAAQLGLKTTCIEKR TLGGTCLNVGCIPSKALLHSSHM+HEA+HSFA+H
Sbjct: 59  GYVAAIKAAQLGLKTTCIEKRGTLGGTCLNVGCIPSKALLHSSHMFHEAQHSFASH 114


Top