BLASTX nr result

ID: Panax21_contig00016434 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00016434
         (482 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN73672.1| hypothetical protein VITISV_031859 [Vitis vinifera]    71   8e-11
ref|XP_004135020.1| PREDICTED: pentatricopeptide repeat-containi...    59   5e-07
ref|XP_003612228.1| Pentatricopeptide repeat-containing protein ...    58   9e-07

>emb|CAN73672.1| hypothetical protein VITISV_031859 [Vitis vinifera]
          Length = 901

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 29/49 (59%), Positives = 42/49 (85%)
 Frame = -1

Query: 482 VAGQWEDVARTKDMMKDRGLQRMLGCSLAGLKEIVHNLKVGDEWTQNIQ 336
           VAG+WEDVAR K+M+K+RG+++M GC+LA LKEIVH  K+G++W Q ++
Sbjct: 842 VAGRWEDVARVKEMVKERGIKQMPGCNLADLKEIVHEFKLGEKWQQGME 890


>ref|XP_004135020.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g51320-like [Cucumis sativus]
          Length = 575

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 27/56 (48%), Positives = 40/56 (71%)
 Frame = -1

Query: 482 VAGQWEDVARTKDMMKDRGLQRMLGCSLAGLKEIVHNLKVGDEWTQNIQDINMSIN 315
           VAG+WEDV+R K +MK++ L  M GC L  LKEIVH+LK+G+   + +++ N  I+
Sbjct: 520 VAGRWEDVSRIKLLMKEKRLGTMSGCRLVDLKEIVHSLKLGNHLQERMKETNTVIH 575


>ref|XP_003612228.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355513563|gb|AES95186.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 665

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 25/56 (44%), Positives = 38/56 (67%)
 Frame = -1

Query: 482 VAGQWEDVARTKDMMKDRGLQRMLGCSLAGLKEIVHNLKVGDEWTQNIQDINMSIN 315
           VA QWE+V+R + +MK+R L  + G +L  LK IVHN KV + W + I+ +N+ +N
Sbjct: 509 VAAQWENVSRVQKLMKERKLDIIPGSNLVDLKNIVHNFKVSNNWREGIEAVNIMMN 564


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