BLASTX nr result
ID: Panax21_contig00016420
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00016420 (754 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002527496.1| histone deacetylase hda2, putative [Ricinus ... 232 6e-59 emb|CBI22472.3| unnamed protein product [Vitis vinifera] 222 7e-56 ref|XP_002263779.1| PREDICTED: histone deacetylase 6-like [Vitis... 222 7e-56 ref|XP_002313903.1| predicted protein [Populus trichocarpa] gi|1... 217 2e-54 ref|XP_004152271.1| PREDICTED: histone deacetylase 6-like [Cucum... 206 4e-51 >ref|XP_002527496.1| histone deacetylase hda2, putative [Ricinus communis] gi|223533136|gb|EEF34894.1| histone deacetylase hda2, putative [Ricinus communis] Length = 159 Score = 232 bits (592), Expect = 6e-59 Identities = 104/128 (81%), Positives = 113/128 (88%) Frame = -3 Query: 668 EDEELVQLYGSESGWVEARTHCDHLDSLSSDLTHIPTPDTACHRCDHPDENWLCLCCKDV 489 ED+EL+ +YGSESGWVEA+T CDHL SLSSDL+HI TPDT CHRC HP ENWLCL CKDV Sbjct: 21 EDDELMTVYGSESGWVEAKTSCDHLGSLSSDLSHISTPDTPCHRCQHPSENWLCLSCKDV 80 Query: 488 LCSRFVNKHMLEHSQQREHSLALSYSDLSVWCFSCDAYLDAQVILPLRPVYETAYILKFG 309 LCSRFVNKHML+H Q H +ALSYSDLSVWCF+CDAYLDAQVI+ LRPVYETAYILKFG Sbjct: 81 LCSRFVNKHMLQHYHQTHHCVALSYSDLSVWCFACDAYLDAQVIMQLRPVYETAYILKFG 140 Query: 308 EAPPFRTV 285 EAPPFR V Sbjct: 141 EAPPFRAV 148 >emb|CBI22472.3| unnamed protein product [Vitis vinifera] Length = 153 Score = 222 bits (565), Expect = 7e-56 Identities = 102/127 (80%), Positives = 110/127 (86%) Frame = -3 Query: 668 EDEELVQLYGSESGWVEARTHCDHLDSLSSDLTHIPTPDTACHRCDHPDENWLCLCCKDV 489 EDEE LYG+ESGWVEART CDHL SLSSDL HIPTP+T C+RC +P ENWLCLCCK+V Sbjct: 17 EDEEF--LYGAESGWVEARTSCDHLASLSSDLVHIPTPETPCNRCHNPSENWLCLCCKEV 74 Query: 488 LCSRFVNKHMLEHSQQREHSLALSYSDLSVWCFSCDAYLDAQVILPLRPVYETAYILKFG 309 LCSRFVNKHMLEH Q+ H LALSYSDLS+WCFSCDAYLDAQ IL L PVYETAYILKFG Sbjct: 75 LCSRFVNKHMLEHYQKVNHCLALSYSDLSIWCFSCDAYLDAQAILQLHPVYETAYILKFG 134 Query: 308 EAPPFRT 288 +APPF T Sbjct: 135 QAPPFPT 141 >ref|XP_002263779.1| PREDICTED: histone deacetylase 6-like [Vitis vinifera] Length = 154 Score = 222 bits (565), Expect = 7e-56 Identities = 102/127 (80%), Positives = 110/127 (86%) Frame = -3 Query: 668 EDEELVQLYGSESGWVEARTHCDHLDSLSSDLTHIPTPDTACHRCDHPDENWLCLCCKDV 489 EDEE LYG+ESGWVEART CDHL SLSSDL HIPTP+T C+RC +P ENWLCLCCK+V Sbjct: 18 EDEEF--LYGAESGWVEARTSCDHLASLSSDLVHIPTPETPCNRCHNPSENWLCLCCKEV 75 Query: 488 LCSRFVNKHMLEHSQQREHSLALSYSDLSVWCFSCDAYLDAQVILPLRPVYETAYILKFG 309 LCSRFVNKHMLEH Q+ H LALSYSDLS+WCFSCDAYLDAQ IL L PVYETAYILKFG Sbjct: 76 LCSRFVNKHMLEHYQKVNHCLALSYSDLSIWCFSCDAYLDAQAILQLHPVYETAYILKFG 135 Query: 308 EAPPFRT 288 +APPF T Sbjct: 136 QAPPFPT 142 >ref|XP_002313903.1| predicted protein [Populus trichocarpa] gi|118483848|gb|ABK93815.1| unknown [Populus trichocarpa] gi|222850311|gb|EEE87858.1| predicted protein [Populus trichocarpa] Length = 160 Score = 217 bits (552), Expect = 2e-54 Identities = 98/128 (76%), Positives = 111/128 (86%) Frame = -3 Query: 668 EDEELVQLYGSESGWVEARTHCDHLDSLSSDLTHIPTPDTACHRCDHPDENWLCLCCKDV 489 ED+E +YG+ESGWVEART CDHL SLSSDL HIPTPDT C+RC HP ENWLCL CKDV Sbjct: 18 EDDEN-DMYGAESGWVEARTSCDHLASLSSDLAHIPTPDTPCNRCQHPSENWLCLSCKDV 76 Query: 488 LCSRFVNKHMLEHSQQREHSLALSYSDLSVWCFSCDAYLDAQVILPLRPVYETAYILKFG 309 LCSRFVNKHML+H Q H LALSYSDLS+WCF+CD+YLDA+VI+ L+PV ETA+ILKFG Sbjct: 77 LCSRFVNKHMLQHFHQTSHCLALSYSDLSIWCFACDSYLDARVIIQLKPVSETAHILKFG 136 Query: 308 EAPPFRTV 285 EAPPFR+V Sbjct: 137 EAPPFRSV 144 >ref|XP_004152271.1| PREDICTED: histone deacetylase 6-like [Cucumis sativus] gi|449484341|ref|XP_004156856.1| PREDICTED: histone deacetylase 6-like [Cucumis sativus] Length = 146 Score = 206 bits (524), Expect = 4e-51 Identities = 95/125 (76%), Positives = 104/125 (83%) Frame = -3 Query: 665 DEELVQLYGSESGWVEARTHCDHLDSLSSDLTHIPTPDTACHRCDHPDENWLCLCCKDVL 486 +EEL LYG+ SGWV+A T CDHL SLSSDL HIP P T C +C +P ENW+CLCCKDV Sbjct: 24 EEEL--LYGAGSGWVQALTSCDHLASLSSDLAHIPPPQTPCSQCQNPKENWVCLCCKDVF 81 Query: 485 CSRFVNKHMLEHSQQREHSLALSYSDLSVWCFSCDAYLDAQVILPLRPVYETAYILKFGE 306 CSRFVNKHML+H +Q H LALSYSDLSVWCFSCDAYLDAQVI LRPV+E AYILKFGE Sbjct: 82 CSRFVNKHMLQHYEQSTHCLALSYSDLSVWCFSCDAYLDAQVIQELRPVHEVAYILKFGE 141 Query: 305 APPFR 291 APPFR Sbjct: 142 APPFR 146