BLASTX nr result
ID: Panax21_contig00016419
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00016419 (684 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002322436.1| predicted protein [Populus trichocarpa] gi|2... 244 9e-63 ref|XP_002279907.2| PREDICTED: arginine/serine-rich-splicing fac... 243 2e-62 emb|CAN82624.1| hypothetical protein VITISV_021436 [Vitis vinifera] 243 2e-62 gb|AAS00039.1| splicing factor-like protein [Vitis riparia] 243 2e-62 emb|CBI31839.3| unnamed protein product [Vitis vinifera] 242 6e-62 >ref|XP_002322436.1| predicted protein [Populus trichocarpa] gi|222869432|gb|EEF06563.1| predicted protein [Populus trichocarpa] Length = 343 Score = 244 bits (624), Expect = 9e-63 Identities = 115/149 (77%), Positives = 135/149 (90%) Frame = -2 Query: 449 GFAFVYMEDERDAEDAIRRLDQYEFGRKGRRLRVEWTKQERSVRKPVXXXXXXXNLRPSK 270 GFAF+YMEDERDAEDAIR LD+ EFGRKGRRLRVEWTKQER +R+P N RPSK Sbjct: 36 GFAFIYMEDERDAEDAIRGLDRVEFGRKGRRLRVEWTKQERGIRRPGGTSRRSTNTRPSK 95 Query: 269 TLFVINFDPYHTRTRDLERHFDPYGKILNIRIRRNFAFIQFESQEDASKALDATNMSKLM 90 TLFVINFDP+HTRT+DLERHF+PYG+I+++RIRRNFAF+Q+E+QEDA+KALDATN+SKL+ Sbjct: 96 TLFVINFDPHHTRTKDLERHFEPYGRIVSVRIRRNFAFVQYEAQEDATKALDATNLSKLL 155 Query: 89 DRVISVEYAIKDDDERKGGYSPERIRDRS 3 DRVISVEYA++DDDERK GYSP+R RDRS Sbjct: 156 DRVISVEYAVRDDDERKDGYSPDRSRDRS 184 >ref|XP_002279907.2| PREDICTED: arginine/serine-rich-splicing factor RSP40-like [Vitis vinifera] Length = 480 Score = 243 bits (621), Expect = 2e-62 Identities = 120/150 (80%), Positives = 135/150 (90%), Gaps = 1/150 (0%) Frame = -2 Query: 449 GFAFVYMEDERDAEDAIRRLDQYEFGRKGRRLRVEWTKQERSVRKPVXXXXXXXNLRPSK 270 GFAF+YMEDERDAEDAIR LD+ FGRKGRRLRVEWTKQER +R+P NLRP+K Sbjct: 38 GFAFIYMEDERDAEDAIRGLDRTGFGRKGRRLRVEWTKQERGIRRPSGSRRSSTNLRPAK 97 Query: 269 TLFVINFDPYHTRTRDLERHFDPYGKILNIRIRRNFAFIQFESQEDASKALDATNMSKLM 90 TLFVINFDPY+TRTRDLERHFDPYGKILNIRIRRNFAFIQ+ESQEDA++AL+ATNMSKLM Sbjct: 98 TLFVINFDPYNTRTRDLERHFDPYGKILNIRIRRNFAFIQYESQEDATRALEATNMSKLM 157 Query: 89 DRVISVEYAIKDDDERKGGYSPE-RIRDRS 3 DRVISVEYA++DDDER+ GYSP+ R RD+S Sbjct: 158 DRVISVEYAVRDDDERRNGYSPDGRRRDKS 187 >emb|CAN82624.1| hypothetical protein VITISV_021436 [Vitis vinifera] Length = 479 Score = 243 bits (621), Expect = 2e-62 Identities = 120/150 (80%), Positives = 135/150 (90%), Gaps = 1/150 (0%) Frame = -2 Query: 449 GFAFVYMEDERDAEDAIRRLDQYEFGRKGRRLRVEWTKQERSVRKPVXXXXXXXNLRPSK 270 GFAF+YMEDERDAEDAIR LD+ FGRKGRRLRVEWTKQER +R+P NLRP+K Sbjct: 36 GFAFIYMEDERDAEDAIRGLDRTGFGRKGRRLRVEWTKQERGIRRPSGSRRSSTNLRPAK 95 Query: 269 TLFVINFDPYHTRTRDLERHFDPYGKILNIRIRRNFAFIQFESQEDASKALDATNMSKLM 90 TLFVINFDPY+TRTRDLERHFDPYGKILNIRIRRNFAFIQ+ESQEDA++AL+ATNMSKLM Sbjct: 96 TLFVINFDPYNTRTRDLERHFDPYGKILNIRIRRNFAFIQYESQEDATRALEATNMSKLM 155 Query: 89 DRVISVEYAIKDDDERKGGYSPE-RIRDRS 3 DRVISVEYA++DDDER+ GYSP+ R RD+S Sbjct: 156 DRVISVEYAVRDDDERRNGYSPDGRRRDKS 185 >gb|AAS00039.1| splicing factor-like protein [Vitis riparia] Length = 478 Score = 243 bits (621), Expect = 2e-62 Identities = 120/150 (80%), Positives = 135/150 (90%), Gaps = 1/150 (0%) Frame = -2 Query: 449 GFAFVYMEDERDAEDAIRRLDQYEFGRKGRRLRVEWTKQERSVRKPVXXXXXXXNLRPSK 270 GFAF+YMEDERDAEDAIR LD+ FGRKGRRLRVEWTKQER +R+P NLRP+K Sbjct: 36 GFAFIYMEDERDAEDAIRGLDRTGFGRKGRRLRVEWTKQERGIRRPSGSRRSSTNLRPAK 95 Query: 269 TLFVINFDPYHTRTRDLERHFDPYGKILNIRIRRNFAFIQFESQEDASKALDATNMSKLM 90 TLFVINFDPY+TRTRDLERHFDPYGKILNIRIRRNFAFIQ+ESQEDA++AL+ATNMSKLM Sbjct: 96 TLFVINFDPYNTRTRDLERHFDPYGKILNIRIRRNFAFIQYESQEDATRALEATNMSKLM 155 Query: 89 DRVISVEYAIKDDDERKGGYSPE-RIRDRS 3 DRVISVEYA++DDDER+ GYSP+ R RD+S Sbjct: 156 DRVISVEYAVRDDDERRNGYSPDGRRRDKS 185 >emb|CBI31839.3| unnamed protein product [Vitis vinifera] Length = 196 Score = 242 bits (617), Expect = 6e-62 Identities = 119/149 (79%), Positives = 134/149 (89%), Gaps = 1/149 (0%) Frame = -2 Query: 449 GFAFVYMEDERDAEDAIRRLDQYEFGRKGRRLRVEWTKQERSVRKPVXXXXXXXNLRPSK 270 GFAF+YMEDERDAEDAIR LD+ FGRKGRRLRVEWTKQER +R+P NLRP+K Sbjct: 14 GFAFIYMEDERDAEDAIRGLDRTGFGRKGRRLRVEWTKQERGIRRPSGSRRSSTNLRPAK 73 Query: 269 TLFVINFDPYHTRTRDLERHFDPYGKILNIRIRRNFAFIQFESQEDASKALDATNMSKLM 90 TLFVINFDPY+TRTRDLERHFDPYGKILNIRIRRNFAFIQ+ESQEDA++AL+ATNMSKLM Sbjct: 74 TLFVINFDPYNTRTRDLERHFDPYGKILNIRIRRNFAFIQYESQEDATRALEATNMSKLM 133 Query: 89 DRVISVEYAIKDDDERKGGYSPE-RIRDR 6 DRVISVEYA++DDDER+ GYSP+ R RD+ Sbjct: 134 DRVISVEYAVRDDDERRNGYSPDGRRRDK 162