BLASTX nr result

ID: Panax21_contig00016419 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00016419
         (684 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322436.1| predicted protein [Populus trichocarpa] gi|2...   244   9e-63
ref|XP_002279907.2| PREDICTED: arginine/serine-rich-splicing fac...   243   2e-62
emb|CAN82624.1| hypothetical protein VITISV_021436 [Vitis vinifera]   243   2e-62
gb|AAS00039.1| splicing factor-like protein [Vitis riparia]           243   2e-62
emb|CBI31839.3| unnamed protein product [Vitis vinifera]              242   6e-62

>ref|XP_002322436.1| predicted protein [Populus trichocarpa] gi|222869432|gb|EEF06563.1|
           predicted protein [Populus trichocarpa]
          Length = 343

 Score =  244 bits (624), Expect = 9e-63
 Identities = 115/149 (77%), Positives = 135/149 (90%)
 Frame = -2

Query: 449 GFAFVYMEDERDAEDAIRRLDQYEFGRKGRRLRVEWTKQERSVRKPVXXXXXXXNLRPSK 270
           GFAF+YMEDERDAEDAIR LD+ EFGRKGRRLRVEWTKQER +R+P        N RPSK
Sbjct: 36  GFAFIYMEDERDAEDAIRGLDRVEFGRKGRRLRVEWTKQERGIRRPGGTSRRSTNTRPSK 95

Query: 269 TLFVINFDPYHTRTRDLERHFDPYGKILNIRIRRNFAFIQFESQEDASKALDATNMSKLM 90
           TLFVINFDP+HTRT+DLERHF+PYG+I+++RIRRNFAF+Q+E+QEDA+KALDATN+SKL+
Sbjct: 96  TLFVINFDPHHTRTKDLERHFEPYGRIVSVRIRRNFAFVQYEAQEDATKALDATNLSKLL 155

Query: 89  DRVISVEYAIKDDDERKGGYSPERIRDRS 3
           DRVISVEYA++DDDERK GYSP+R RDRS
Sbjct: 156 DRVISVEYAVRDDDERKDGYSPDRSRDRS 184


>ref|XP_002279907.2| PREDICTED: arginine/serine-rich-splicing factor RSP40-like [Vitis
           vinifera]
          Length = 480

 Score =  243 bits (621), Expect = 2e-62
 Identities = 120/150 (80%), Positives = 135/150 (90%), Gaps = 1/150 (0%)
 Frame = -2

Query: 449 GFAFVYMEDERDAEDAIRRLDQYEFGRKGRRLRVEWTKQERSVRKPVXXXXXXXNLRPSK 270
           GFAF+YMEDERDAEDAIR LD+  FGRKGRRLRVEWTKQER +R+P        NLRP+K
Sbjct: 38  GFAFIYMEDERDAEDAIRGLDRTGFGRKGRRLRVEWTKQERGIRRPSGSRRSSTNLRPAK 97

Query: 269 TLFVINFDPYHTRTRDLERHFDPYGKILNIRIRRNFAFIQFESQEDASKALDATNMSKLM 90
           TLFVINFDPY+TRTRDLERHFDPYGKILNIRIRRNFAFIQ+ESQEDA++AL+ATNMSKLM
Sbjct: 98  TLFVINFDPYNTRTRDLERHFDPYGKILNIRIRRNFAFIQYESQEDATRALEATNMSKLM 157

Query: 89  DRVISVEYAIKDDDERKGGYSPE-RIRDRS 3
           DRVISVEYA++DDDER+ GYSP+ R RD+S
Sbjct: 158 DRVISVEYAVRDDDERRNGYSPDGRRRDKS 187


>emb|CAN82624.1| hypothetical protein VITISV_021436 [Vitis vinifera]
          Length = 479

 Score =  243 bits (621), Expect = 2e-62
 Identities = 120/150 (80%), Positives = 135/150 (90%), Gaps = 1/150 (0%)
 Frame = -2

Query: 449 GFAFVYMEDERDAEDAIRRLDQYEFGRKGRRLRVEWTKQERSVRKPVXXXXXXXNLRPSK 270
           GFAF+YMEDERDAEDAIR LD+  FGRKGRRLRVEWTKQER +R+P        NLRP+K
Sbjct: 36  GFAFIYMEDERDAEDAIRGLDRTGFGRKGRRLRVEWTKQERGIRRPSGSRRSSTNLRPAK 95

Query: 269 TLFVINFDPYHTRTRDLERHFDPYGKILNIRIRRNFAFIQFESQEDASKALDATNMSKLM 90
           TLFVINFDPY+TRTRDLERHFDPYGKILNIRIRRNFAFIQ+ESQEDA++AL+ATNMSKLM
Sbjct: 96  TLFVINFDPYNTRTRDLERHFDPYGKILNIRIRRNFAFIQYESQEDATRALEATNMSKLM 155

Query: 89  DRVISVEYAIKDDDERKGGYSPE-RIRDRS 3
           DRVISVEYA++DDDER+ GYSP+ R RD+S
Sbjct: 156 DRVISVEYAVRDDDERRNGYSPDGRRRDKS 185


>gb|AAS00039.1| splicing factor-like protein [Vitis riparia]
          Length = 478

 Score =  243 bits (621), Expect = 2e-62
 Identities = 120/150 (80%), Positives = 135/150 (90%), Gaps = 1/150 (0%)
 Frame = -2

Query: 449 GFAFVYMEDERDAEDAIRRLDQYEFGRKGRRLRVEWTKQERSVRKPVXXXXXXXNLRPSK 270
           GFAF+YMEDERDAEDAIR LD+  FGRKGRRLRVEWTKQER +R+P        NLRP+K
Sbjct: 36  GFAFIYMEDERDAEDAIRGLDRTGFGRKGRRLRVEWTKQERGIRRPSGSRRSSTNLRPAK 95

Query: 269 TLFVINFDPYHTRTRDLERHFDPYGKILNIRIRRNFAFIQFESQEDASKALDATNMSKLM 90
           TLFVINFDPY+TRTRDLERHFDPYGKILNIRIRRNFAFIQ+ESQEDA++AL+ATNMSKLM
Sbjct: 96  TLFVINFDPYNTRTRDLERHFDPYGKILNIRIRRNFAFIQYESQEDATRALEATNMSKLM 155

Query: 89  DRVISVEYAIKDDDERKGGYSPE-RIRDRS 3
           DRVISVEYA++DDDER+ GYSP+ R RD+S
Sbjct: 156 DRVISVEYAVRDDDERRNGYSPDGRRRDKS 185


>emb|CBI31839.3| unnamed protein product [Vitis vinifera]
          Length = 196

 Score =  242 bits (617), Expect = 6e-62
 Identities = 119/149 (79%), Positives = 134/149 (89%), Gaps = 1/149 (0%)
 Frame = -2

Query: 449 GFAFVYMEDERDAEDAIRRLDQYEFGRKGRRLRVEWTKQERSVRKPVXXXXXXXNLRPSK 270
           GFAF+YMEDERDAEDAIR LD+  FGRKGRRLRVEWTKQER +R+P        NLRP+K
Sbjct: 14  GFAFIYMEDERDAEDAIRGLDRTGFGRKGRRLRVEWTKQERGIRRPSGSRRSSTNLRPAK 73

Query: 269 TLFVINFDPYHTRTRDLERHFDPYGKILNIRIRRNFAFIQFESQEDASKALDATNMSKLM 90
           TLFVINFDPY+TRTRDLERHFDPYGKILNIRIRRNFAFIQ+ESQEDA++AL+ATNMSKLM
Sbjct: 74  TLFVINFDPYNTRTRDLERHFDPYGKILNIRIRRNFAFIQYESQEDATRALEATNMSKLM 133

Query: 89  DRVISVEYAIKDDDERKGGYSPE-RIRDR 6
           DRVISVEYA++DDDER+ GYSP+ R RD+
Sbjct: 134 DRVISVEYAVRDDDERRNGYSPDGRRRDK 162


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