BLASTX nr result

ID: Panax21_contig00016414 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00016414
         (748 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527838.1| helicase, putative [Ricinus communis] gi|223...   348   7e-94
emb|CBI24348.3| unnamed protein product [Vitis vinifera]              342   4e-92
ref|XP_002273102.1| PREDICTED: superkiller viralicidic activity ...   342   4e-92
gb|AFW86220.1| hypothetical protein ZEAMMB73_184778 [Zea mays]        315   6e-84
gb|AFW86219.1| hypothetical protein ZEAMMB73_184778 [Zea mays]        315   6e-84

>ref|XP_002527838.1| helicase, putative [Ricinus communis] gi|223532762|gb|EEF34541.1|
           helicase, putative [Ricinus communis]
          Length = 991

 Score =  348 bits (893), Expect = 7e-94
 Identities = 176/206 (85%), Positives = 184/206 (89%)
 Frame = +3

Query: 126 MGSIKRKSVGDPIEESTPPLKQQRVNGLMGVDEPVACVHDVSYPEGYLPRYSDPSSAQEN 305
           M  +KRKSV  P  ES PP KQQR NG+   DEPVAC+HDVSYPE Y+P     SS Q++
Sbjct: 1   MALLKRKSVEYPSGESLPPQKQQRENGMATADEPVACLHDVSYPENYVPPPRLDSSVQKD 60

Query: 306 SKPAKEFPFTLDPFQSEAIKCLDIGESVMVSAHTSAGKTVVALYAIAMSLRNKQRVIYTS 485
            KPAKEFPFTLDPFQSEAIKCL+ GESVMVSAHTSAGKTVVALYAIAMSLRN+QRVIYTS
Sbjct: 61  LKPAKEFPFTLDPFQSEAIKCLNNGESVMVSAHTSAGKTVVALYAIAMSLRNQQRVIYTS 120

Query: 486 PIKALSNQKYREFKEEFSDVGLMTGDVTIEPNASCLVMTTEIWRSMQYKGSEIIREVAWV 665
           PIKALSNQKYREFKEEFSDVGLMTGDVTIEPNASCLVMTTEIWRSMQYKGSEI REVAWV
Sbjct: 121 PIKALSNQKYREFKEEFSDVGLMTGDVTIEPNASCLVMTTEIWRSMQYKGSEITREVAWV 180

Query: 666 IFDEVHYMRDRERGVVWEESIVMAPK 743
           IFDEVHYMRDRERGVVWEESIVMAPK
Sbjct: 181 IFDEVHYMRDRERGVVWEESIVMAPK 206


>emb|CBI24348.3| unnamed protein product [Vitis vinifera]
          Length = 968

 Score =  342 bits (878), Expect = 4e-92
 Identities = 175/208 (84%), Positives = 185/208 (88%), Gaps = 2/208 (0%)
 Frame = +3

Query: 126 MGSIKRKSVGDPIEESTPPLKQQRVNG--LMGVDEPVACVHDVSYPEGYLPRYSDPSSAQ 299
           MGS+KRKS  DP  E   P KQQR +   L  ++E VAC+HDVSYPEGY PR S  SS +
Sbjct: 1   MGSLKRKSTEDPSVERLSPQKQQREDSASLNTLEESVACIHDVSYPEGYEPRSSFSSSPR 60

Query: 300 ENSKPAKEFPFTLDPFQSEAIKCLDIGESVMVSAHTSAGKTVVALYAIAMSLRNKQRVIY 479
           ++SKPAKEFPFTLDPFQSEAIKCLD  ESVMVSAHTSAGKTVVALYAIAMSL+N QRVIY
Sbjct: 61  KDSKPAKEFPFTLDPFQSEAIKCLDAEESVMVSAHTSAGKTVVALYAIAMSLQNNQRVIY 120

Query: 480 TSPIKALSNQKYREFKEEFSDVGLMTGDVTIEPNASCLVMTTEIWRSMQYKGSEIIREVA 659
           TSPIKALSNQKYREFKEEFSDVGLMTGDVTIEPNASCLVMTTEIWRSMQYKGSEIIREVA
Sbjct: 121 TSPIKALSNQKYREFKEEFSDVGLMTGDVTIEPNASCLVMTTEIWRSMQYKGSEIIREVA 180

Query: 660 WVIFDEVHYMRDRERGVVWEESIVMAPK 743
           WVIFDEVHYMRDRERGVVWEESIVMAP+
Sbjct: 181 WVIFDEVHYMRDRERGVVWEESIVMAPR 208


>ref|XP_002273102.1| PREDICTED: superkiller viralicidic activity 2-like 2 [Vitis
           vinifera]
          Length = 994

 Score =  342 bits (878), Expect = 4e-92
 Identities = 175/208 (84%), Positives = 185/208 (88%), Gaps = 2/208 (0%)
 Frame = +3

Query: 126 MGSIKRKSVGDPIEESTPPLKQQRVNG--LMGVDEPVACVHDVSYPEGYLPRYSDPSSAQ 299
           MGS+KRKS  DP  E   P KQQR +   L  ++E VAC+HDVSYPEGY PR S  SS +
Sbjct: 1   MGSLKRKSTEDPSVERLSPQKQQREDSASLNTLEESVACIHDVSYPEGYEPRSSFSSSPR 60

Query: 300 ENSKPAKEFPFTLDPFQSEAIKCLDIGESVMVSAHTSAGKTVVALYAIAMSLRNKQRVIY 479
           ++SKPAKEFPFTLDPFQSEAIKCLD  ESVMVSAHTSAGKTVVALYAIAMSL+N QRVIY
Sbjct: 61  KDSKPAKEFPFTLDPFQSEAIKCLDAEESVMVSAHTSAGKTVVALYAIAMSLQNNQRVIY 120

Query: 480 TSPIKALSNQKYREFKEEFSDVGLMTGDVTIEPNASCLVMTTEIWRSMQYKGSEIIREVA 659
           TSPIKALSNQKYREFKEEFSDVGLMTGDVTIEPNASCLVMTTEIWRSMQYKGSEIIREVA
Sbjct: 121 TSPIKALSNQKYREFKEEFSDVGLMTGDVTIEPNASCLVMTTEIWRSMQYKGSEIIREVA 180

Query: 660 WVIFDEVHYMRDRERGVVWEESIVMAPK 743
           WVIFDEVHYMRDRERGVVWEESIVMAP+
Sbjct: 181 WVIFDEVHYMRDRERGVVWEESIVMAPR 208


>gb|AFW86220.1| hypothetical protein ZEAMMB73_184778 [Zea mays]
          Length = 1000

 Score =  315 bits (807), Expect = 6e-84
 Identities = 166/218 (76%), Positives = 182/218 (83%), Gaps = 12/218 (5%)
 Frame = +3

Query: 126 MGSIKRKSV---GDPIEEST--PPLK----QQRVNGLMGVDEPVACVHDVSYPEGYLPRY 278
           M ++KRK+V   GD  + S+  PPL     + R    +   EPVACVHDVSYPEGY P  
Sbjct: 1   METLKRKAVDSPGDAYQASSLKPPLAAAAVEPRAPTTLAAAEPVACVHDVSYPEGYDPSA 60

Query: 279 SDP---SSAQENSKPAKEFPFTLDPFQSEAIKCLDIGESVMVSAHTSAGKTVVALYAIAM 449
           S     +   + S+PAK+FPF LDPFQ+EAI+CLD GESVMVSAHTSAGKTVVALYAIAM
Sbjct: 61  STSRAIAGGADASEPAKKFPFQLDPFQAEAIRCLDNGESVMVSAHTSAGKTVVALYAIAM 120

Query: 450 SLRNKQRVIYTSPIKALSNQKYREFKEEFSDVGLMTGDVTIEPNASCLVMTTEIWRSMQY 629
           SLRN+QRVIYTSPIKALSNQKYREFKEEFSDVGLMTGDVTIEPNASCLVMTTEIWRSMQY
Sbjct: 121 SLRNQQRVIYTSPIKALSNQKYREFKEEFSDVGLMTGDVTIEPNASCLVMTTEIWRSMQY 180

Query: 630 KGSEIIREVAWVIFDEVHYMRDRERGVVWEESIVMAPK 743
           KGSE++REVAWVIFDEVHYMRDRERGVVWEESIVMAPK
Sbjct: 181 KGSEVMREVAWVIFDEVHYMRDRERGVVWEESIVMAPK 218


>gb|AFW86219.1| hypothetical protein ZEAMMB73_184778 [Zea mays]
          Length = 1004

 Score =  315 bits (807), Expect = 6e-84
 Identities = 166/218 (76%), Positives = 182/218 (83%), Gaps = 12/218 (5%)
 Frame = +3

Query: 126 MGSIKRKSV---GDPIEEST--PPLK----QQRVNGLMGVDEPVACVHDVSYPEGYLPRY 278
           M ++KRK+V   GD  + S+  PPL     + R    +   EPVACVHDVSYPEGY P  
Sbjct: 1   METLKRKAVDSPGDAYQASSLKPPLAAAAVEPRAPTTLAAAEPVACVHDVSYPEGYDPSA 60

Query: 279 SDP---SSAQENSKPAKEFPFTLDPFQSEAIKCLDIGESVMVSAHTSAGKTVVALYAIAM 449
           S     +   + S+PAK+FPF LDPFQ+EAI+CLD GESVMVSAHTSAGKTVVALYAIAM
Sbjct: 61  STSRAIAGGADASEPAKKFPFQLDPFQAEAIRCLDNGESVMVSAHTSAGKTVVALYAIAM 120

Query: 450 SLRNKQRVIYTSPIKALSNQKYREFKEEFSDVGLMTGDVTIEPNASCLVMTTEIWRSMQY 629
           SLRN+QRVIYTSPIKALSNQKYREFKEEFSDVGLMTGDVTIEPNASCLVMTTEIWRSMQY
Sbjct: 121 SLRNQQRVIYTSPIKALSNQKYREFKEEFSDVGLMTGDVTIEPNASCLVMTTEIWRSMQY 180

Query: 630 KGSEIIREVAWVIFDEVHYMRDRERGVVWEESIVMAPK 743
           KGSE++REVAWVIFDEVHYMRDRERGVVWEESIVMAPK
Sbjct: 181 KGSEVMREVAWVIFDEVHYMRDRERGVVWEESIVMAPK 218


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