BLASTX nr result

ID: Panax21_contig00016411 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00016411
         (785 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330704.1| predicted protein [Populus trichocarpa] gi|2...    63   5e-15
ref|XP_002276253.2| PREDICTED: uncharacterized protein LOC100254...    61   1e-14
emb|CBI24671.3| unnamed protein product [Vitis vinifera]               61   1e-14
ref|XP_002530590.1| membrane associated ring finger 1,8, putativ...    63   2e-14
ref|NP_001145375.1| uncharacterized protein LOC100278718 [Zea ma...    61   5e-10

>ref|XP_002330704.1| predicted protein [Populus trichocarpa] gi|222872308|gb|EEF09439.1|
           predicted protein [Populus trichocarpa]
          Length = 216

 Score = 62.8 bits (151), Expect(2) = 5e-15
 Identities = 25/27 (92%), Positives = 26/27 (96%)
 Frame = +3

Query: 132 IKFAHRKCIQRWCKKKGDITCEICNQV 212
           +KFAHRKCIQRWC KKGDITCEICNQV
Sbjct: 28  LKFAHRKCIQRWCNKKGDITCEICNQV 54



 Score = 44.3 bits (103), Expect(2) = 5e-15
 Identities = 18/23 (78%), Positives = 21/23 (91%)
 Frame = +2

Query: 302 VFSPNYAFPPAKSNPDIMAIDIR 370
           VFSPNY+ PPA+ NPD+MAIDIR
Sbjct: 54  VFSPNYSLPPARINPDVMAIDIR 76


>ref|XP_002276253.2| PREDICTED: uncharacterized protein LOC100254146 [Vitis vinifera]
          Length = 304

 Score = 60.8 bits (146), Expect(2) = 1e-14
 Identities = 24/27 (88%), Positives = 25/27 (92%)
 Frame = +3

Query: 132 IKFAHRKCIQRWCKKKGDITCEICNQV 212
           +KFAHRKCIQRWC KKGD TCEICNQV
Sbjct: 91  LKFAHRKCIQRWCNKKGDTTCEICNQV 117



 Score = 45.1 bits (105), Expect(2) = 1e-14
 Identities = 18/23 (78%), Positives = 21/23 (91%)
 Frame = +2

Query: 302 VFSPNYAFPPAKSNPDIMAIDIR 370
           VFSPNY+ PP +SNPD+MAIDIR
Sbjct: 117 VFSPNYSLPPGRSNPDVMAIDIR 139


>emb|CBI24671.3| unnamed protein product [Vitis vinifera]
          Length = 191

 Score = 60.8 bits (146), Expect(2) = 1e-14
 Identities = 24/27 (88%), Positives = 25/27 (92%)
 Frame = +3

Query: 132 IKFAHRKCIQRWCKKKGDITCEICNQV 212
           +KFAHRKCIQRWC KKGD TCEICNQV
Sbjct: 33  LKFAHRKCIQRWCNKKGDTTCEICNQV 59



 Score = 45.1 bits (105), Expect(2) = 1e-14
 Identities = 18/23 (78%), Positives = 21/23 (91%)
 Frame = +2

Query: 302 VFSPNYAFPPAKSNPDIMAIDIR 370
           VFSPNY+ PP +SNPD+MAIDIR
Sbjct: 59  VFSPNYSLPPGRSNPDVMAIDIR 81


>ref|XP_002530590.1| membrane associated ring finger 1,8, putative [Ricinus communis]
           gi|223529889|gb|EEF31820.1| membrane associated ring
           finger 1,8, putative [Ricinus communis]
          Length = 370

 Score = 62.8 bits (151), Expect(2) = 2e-14
 Identities = 25/27 (92%), Positives = 26/27 (96%)
 Frame = +3

Query: 132 IKFAHRKCIQRWCKKKGDITCEICNQV 212
           +KFAHRKCIQRWC KKGDITCEICNQV
Sbjct: 93  LKFAHRKCIQRWCNKKGDITCEICNQV 119



 Score = 42.7 bits (99), Expect(2) = 2e-14
 Identities = 17/23 (73%), Positives = 22/23 (95%)
 Frame = +2

Query: 302 VFSPNYAFPPAKSNPDIMAIDIR 370
           VFSPNY+ PPA+S+PD+MAI+IR
Sbjct: 119 VFSPNYSVPPARSSPDVMAIEIR 141


>ref|NP_001145375.1| uncharacterized protein LOC100278718 [Zea mays]
           gi|195655235|gb|ACG47085.1| zinc finger protein [Zea
           mays]
          Length = 213

 Score = 60.8 bits (146), Expect(2) = 5e-10
 Identities = 24/27 (88%), Positives = 26/27 (96%)
 Frame = +3

Query: 132 IKFAHRKCIQRWCKKKGDITCEICNQV 212
           +KFAHRKCIQRWC KKG+ITCEICNQV
Sbjct: 58  LKFAHRKCIQRWCNKKGNITCEICNQV 84



 Score = 29.3 bits (64), Expect(2) = 5e-10
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +2

Query: 302 VFSPNYAFPPAKSNPDIMAIDIR 370
           V+SPNYA PP K   D   +D+R
Sbjct: 84  VYSPNYAIPPPKCCSDETGMDLR 106


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