BLASTX nr result

ID: Panax21_contig00016407 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00016407
         (1013 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284214.1| PREDICTED: uncharacterized ATP-dependent hel...   336   5e-90
emb|CBI19136.3| unnamed protein product [Vitis vinifera]              335   1e-89
emb|CAN65841.1| hypothetical protein VITISV_009619 [Vitis vinifera]   323   5e-86
ref|XP_002513888.1| splicing endonuclease positive effector sen1...   315   1e-83
ref|XP_002306584.1| predicted protein [Populus trichocarpa] gi|2...   308   1e-81

>ref|XP_002284214.1| PREDICTED: uncharacterized ATP-dependent helicase C29A10.10c-like
            [Vitis vinifera]
          Length = 1375

 Score =  336 bits (862), Expect = 5e-90
 Identities = 194/326 (59%), Positives = 226/326 (69%), Gaps = 7/326 (2%)
 Frame = +3

Query: 24   ESISCNPA--NHINDGNSNHASLGLDTFXXXXXXXXXXXXXXXCKADISK-DGHEDSALV 194
            E++SC+        + N++HAS+ LD                  K D+   DG E+  LV
Sbjct: 175  ETLSCDIKVFESTKEENNSHASVTLDPDTHDQRSNSSRNSEGNGKGDVGPMDGQEEPGLV 234

Query: 195  PKPREAKGAEASHALKFANSSGKRPKLDQHKEAMLGKKRSRQTMFLNLEDVKQAGAIKSS 374
            PK +E KG EAS A+K AN+ GK+ KLDQHKEAMLGKKR+RQT+FLNLEDVKQAG +K+S
Sbjct: 235  PKLKEVKGVEASFAVKCANNPGKKHKLDQHKEAMLGKKRTRQTVFLNLEDVKQAGPMKTS 294

Query: 375  TPRRQ-IPAPTMTRIVKEIRPTLVPAELSGENQIQPTNKDPKQVDLSCSEGN--NSVESN 545
            TPRRQ  PAP  TRIVKEIR    PAE  GE Q     KD KQVDLS +EG   N VESN
Sbjct: 295  TPRRQNFPAPITTRIVKEIRSVPPPAERIGEKQNHSMIKDQKQVDLSSNEGGGGNLVESN 354

Query: 546  DLKSECNIDINSGAFARSRWLNSATDLSSEAHSSTIPKQSSLKQPADFRMHKNLQGIGRK 725
            + KSE N D+NSG   R R LNSA D+S+E H  TIP+QSS K P D R  KN Q  GRK
Sbjct: 355  EPKSESNNDMNSGLLGRPRRLNSANDISAEVHPPTIPRQSSWK-PTDSRQFKNSQFSGRK 413

Query: 726  TAVNNQNFMDSKIGVKKLP-SKKQTASISQYQDTSVERLLREVTNENFWHHPEEAELQCV 902
             ++ NQ+  +SK+  KK P +K QT   SQYQDTSVERL+REVTNE FWHHPEE ELQCV
Sbjct: 414  PSMINQS--ESKLVNKKHPPAKMQTTVSSQYQDTSVERLIREVTNEKFWHHPEETELQCV 471

Query: 903  PGQFESVEEYVRVFEPLLFEECRAQL 980
            PG+FESVEEY+RVFEPLLFEECRAQL
Sbjct: 472  PGRFESVEEYIRVFEPLLFEECRAQL 497


>emb|CBI19136.3| unnamed protein product [Vitis vinifera]
          Length = 1073

 Score =  335 bits (859), Expect = 1e-89
 Identities = 191/310 (61%), Positives = 219/310 (70%), Gaps = 5/310 (1%)
 Frame = +3

Query: 66   NSNHASLGLDTFXXXXXXXXXXXXXXXCKADISK-DGHEDSALVPKPREAKGAEASHALK 242
            N++HAS+ LD                  K D+   DG E+  LVPK +E KG EAS A+K
Sbjct: 87   NNSHASVTLDPDTHDQRSNSSRNSEGNGKGDVGPMDGQEEPGLVPKLKEVKGVEASFAVK 146

Query: 243  FANSSGKRPKLDQHKEAMLGKKRSRQTMFLNLEDVKQAGAIKSSTPRRQ-IPAPTMTRIV 419
             AN+ GK+ KLDQHKEAMLGKKR+RQT+FLNLEDVKQAG +K+STPRRQ  PAP  TRIV
Sbjct: 147  CANNPGKKHKLDQHKEAMLGKKRTRQTVFLNLEDVKQAGPMKTSTPRRQNFPAPITTRIV 206

Query: 420  KEIRPTLVPAELSGENQIQPTNKDPKQVDLSCSEGN--NSVESNDLKSECNIDINSGAFA 593
            KEIR    PAE  GE Q     KD KQVDLS +EG   N VESN+ KSE N D+NSG   
Sbjct: 207  KEIRSVPPPAERIGEKQNHSMIKDQKQVDLSSNEGGGGNLVESNEPKSESNNDMNSGLLG 266

Query: 594  RSRWLNSATDLSSEAHSSTIPKQSSLKQPADFRMHKNLQGIGRKTAVNNQNFMDSKIGVK 773
            R R LNSA D+S+E H  TIP+QSS K P D R  KN Q  GRK ++ NQ+  +SK+  K
Sbjct: 267  RPRRLNSANDISAEVHPPTIPRQSSWK-PTDSRQFKNSQFSGRKPSMINQS--ESKLVNK 323

Query: 774  KLP-SKKQTASISQYQDTSVERLLREVTNENFWHHPEEAELQCVPGQFESVEEYVRVFEP 950
            K P +K QT   SQYQDTSVERL+REVTNE FWHHPEE ELQCVPG+FESVEEY+RVFEP
Sbjct: 324  KHPPAKMQTTVSSQYQDTSVERLIREVTNEKFWHHPEETELQCVPGRFESVEEYIRVFEP 383

Query: 951  LLFEECRAQL 980
            LLFEECRAQL
Sbjct: 384  LLFEECRAQL 393


>emb|CAN65841.1| hypothetical protein VITISV_009619 [Vitis vinifera]
          Length = 1408

 Score =  323 bits (827), Expect = 5e-86
 Identities = 193/347 (55%), Positives = 226/347 (65%), Gaps = 28/347 (8%)
 Frame = +3

Query: 24   ESISCNPA--NHINDGNSNHASLGLDTFXXXXXXXXXXXXXXXCKADISK-DGHEDSALV 194
            E++SC+        + N++HAS+ LD                  K D+   DG E+  LV
Sbjct: 175  ETLSCDIKVFESTKEENNSHASVTLDPDTHDQRSNSSRNSEGNGKGDVGPMDGQEEPGLV 234

Query: 195  PKPREAKGAEASHALKFANSSGKRPKLDQHKEAMLGKKRSRQTMFLNLEDVKQAGAIKSS 374
            PK +E KG EAS A+K AN+ GK+ KLDQHKEAMLGKKR+RQT+FLNLEDVKQAG +K+S
Sbjct: 235  PKLKEVKGVEASFAVKCANNPGKKHKLDQHKEAMLGKKRTRQTVFLNLEDVKQAGPMKTS 294

Query: 375  TPRRQ-IPAPTMTRIVKEIRPTLVPAELSGENQIQPTNKDPKQVDLSCSE--GNNSVESN 545
            TPRRQ  PAP  TRIVKEIR    PAE  GE Q     KD KQVDLS +E  G N VESN
Sbjct: 295  TPRRQNFPAPITTRIVKEIRSVPPPAERIGEKQNHSMIKDQKQVDLSSNEGGGGNLVESN 354

Query: 546  DLKSECNIDINSGAFARSRWLNSATDLSSEAHSSTIPKQSSLKQPADFRMHKNLQGIGRK 725
            + KSE N D+NSG   R R LNSA D+S+E H  TIP+QSS K P D R  KN Q  GRK
Sbjct: 355  EPKSESNNDMNSGLLGRPRRLNSANDISAEVHPPTIPRQSSWK-PTDSRQFKNSQFSGRK 413

Query: 726  TAVNNQNFMDSKIGVKK-LPSKKQTASISQYQDTSVERLLREVTNENFWHHPE------- 881
             ++ NQ+  +SK+  KK  P+K QT   SQYQDTSVERL+REVTNE FWHHP+       
Sbjct: 414  PSMINQS--ESKLVNKKHPPAKMQTTVSSQYQDTSVERLIREVTNEKFWHHPDISRFVLN 471

Query: 882  --------------EAELQCVPGQFESVEEYVRVFEPLLFEECRAQL 980
                          E ELQCVPG+FESVEEY+RVFEPLLFEECRAQL
Sbjct: 472  VAVLSYDISMFLNHETELQCVPGRFESVEEYIRVFEPLLFEECRAQL 518


>ref|XP_002513888.1| splicing endonuclease positive effector sen1, putative [Ricinus
            communis] gi|223546974|gb|EEF48471.1| splicing
            endonuclease positive effector sen1, putative [Ricinus
            communis]
          Length = 1352

 Score =  315 bits (807), Expect = 1e-83
 Identities = 174/277 (62%), Positives = 203/277 (73%), Gaps = 2/277 (0%)
 Frame = +3

Query: 156  DISKDGHEDSALVPKPREAKGAEASHALKFANSSGKRPKLDQHKEAMLGKKRSRQTMFLN 335
            D+S DG E+ ALVPK RE KG EA+HALK+AN+ GKR K+DQHKEAMLGKKR+RQTM +N
Sbjct: 219  DVSIDGQEEIALVPKAREVKGIEANHALKYANNGGKR-KIDQHKEAMLGKKRNRQTMLIN 277

Query: 336  LEDVKQAGAIKSSTPRRQIPAPTMTRIVKEIRPTLVPAELSGENQIQPTNKDPKQVDLSC 515
            +++VKQAGAIKSSTPRRQ    T  R VKE+R    PAE  GE          K VDLSC
Sbjct: 278  IDEVKQAGAIKSSTPRRQ---STTIRTVKEVRTAPPPAEHVGE----------KHVDLSC 324

Query: 516  SEGNNSVESNDLKSECNIDINSGAFARSRWLNSATDLSSEAHSSTIPKQSSLKQPADFRM 695
            +EG  S ES  LK+E N D+NSG  A+ R  NS  D  +E     IP+QSS KQPAD R 
Sbjct: 325  NEGGTSAESCHLKNEYNGDMNSGQLAKVRRPNSDMDFPAEGQLPPIPRQSSWKQPADLRQ 384

Query: 696  HKNLQGIGRKTAVNNQNFMDSKIGVKK-LPSKKQTA-SISQYQDTSVERLLREVTNENFW 869
             KN Q   RK A+ +Q+ +DSK+G KK LP+KK    S + YQDTSVERL+REVTNE FW
Sbjct: 385  PKNSQFSNRKLALMSQSSIDSKLGNKKNLPAKKPAVISSTSYQDTSVERLIREVTNEKFW 444

Query: 870  HHPEEAELQCVPGQFESVEEYVRVFEPLLFEECRAQL 980
            HHPE++ELQCVPG+FESVEEYVRVFEPLLFEECRAQL
Sbjct: 445  HHPEDSELQCVPGRFESVEEYVRVFEPLLFEECRAQL 481


>ref|XP_002306584.1| predicted protein [Populus trichocarpa] gi|222856033|gb|EEE93580.1|
           predicted protein [Populus trichocarpa]
          Length = 1147

 Score =  308 bits (790), Expect = 1e-81
 Identities = 171/280 (61%), Positives = 201/280 (71%), Gaps = 9/280 (3%)
 Frame = +3

Query: 168 DGHEDSALVPKPREAKGAEASHALKFANSSGKRPKLDQHKEAMLGKKRSRQTMFLNLEDV 347
           DG E+ A + K RE +G EASHALKF+ + GKR K+DQHKEAMLGKKR+RQTM +N+++V
Sbjct: 2   DGQEEIASLSKQREVRGIEASHALKFSTNPGKR-KIDQHKEAMLGKKRNRQTMLINIDEV 60

Query: 348 KQAGAIKSSTPRRQIPAPTMTRIVKEIRPTLVPAELSGENQIQPTNKDPKQVDLSCSEGN 527
           KQAG +KSSTPRRQ   P +TR VKE+R    PAE SGE    P  KD KQ DL C++G 
Sbjct: 61  KQAGIMKSSTPRRQ---PNVTRTVKEVRTVPQPAERSGERPGHPL-KDQKQADLPCNDGG 116

Query: 528 NSVESNDLKSECNIDINSGAFARSRWLNSATDLSSEAHSSTIPKQSSLKQPA-------- 683
            SVES   KSE N DINS   A++R +N  +D S + H   I KQS+ KQPA        
Sbjct: 117 FSVESCPPKSESNGDINSAQPAKNRKVNGDSDFSVDTHLPPIQKQSTWKQPAESSWKHPA 176

Query: 684 DFRMHKNLQGIGRKTAVNNQNFMDSKIGVKK-LPSKKQTASISQYQDTSVERLLREVTNE 860
           D R  KN Q   RK A+ NQ  MDSK+G KK LP KK T + + YQDTSVERL+REVTNE
Sbjct: 177 DLRQPKNSQFSNRKPALINQGSMDSKLGNKKYLPVKKSTVASTPYQDTSVERLIREVTNE 236

Query: 861 NFWHHPEEAELQCVPGQFESVEEYVRVFEPLLFEECRAQL 980
            FWHHPE++ELQCVPG+FESVEEYVRVFEPLLFEECRAQL
Sbjct: 237 KFWHHPEDSELQCVPGRFESVEEYVRVFEPLLFEECRAQL 276