BLASTX nr result

ID: Panax21_contig00016393 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00016393
         (672 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300985.1| predicted protein [Populus trichocarpa] gi|2...   146   3e-33
ref|XP_002285858.1| PREDICTED: uncharacterized protein LOC100262...   141   1e-31
ref|XP_002513756.1| conserved hypothetical protein [Ricinus comm...   136   3e-30
ref|XP_002891289.1| hypothetical protein ARALYDRAFT_891393 [Arab...   131   1e-28
ref|NP_175087.1| uncharacterized protein [Arabidopsis thaliana] ...   131   1e-28

>ref|XP_002300985.1| predicted protein [Populus trichocarpa] gi|222842711|gb|EEE80258.1|
           predicted protein [Populus trichocarpa]
          Length = 113

 Score =  146 bits (369), Expect = 3e-33
 Identities = 67/112 (59%), Positives = 78/112 (69%), Gaps = 4/112 (3%)
 Frame = +1

Query: 46  MFFFFAGGIEQQVSQVLKKGAGKCINCRSPADLVKYDKVLKLFFVPVWRWPGKDELMHCN 225
           MFFFF GG+EQQV QVLK GAG+CI C S ADLV+Y+KVLKLFF+PVW+WPGK+  MHCN
Sbjct: 1   MFFFFVGGVEQQVRQVLKSGAGRCIRCASKADLVEYEKVLKLFFIPVWKWPGKEPAMHCN 60

Query: 226 NCN----XXXXXXXXXXXXXXXXXVVPDVLRCQYCAREVDSEFKFCPFCGSA 369
           NCN                     VV + LRC +C R V+SEFKFCPFCGS+
Sbjct: 61  NCNLIFPQSFSHTPPKSDYSLPRSVVTESLRCHFCDRVVESEFKFCPFCGSS 112


>ref|XP_002285858.1| PREDICTED: uncharacterized protein LOC100262547 [Vitis vinifera]
          Length = 102

 Score =  141 bits (356), Expect = 1e-31
 Identities = 68/108 (62%), Positives = 75/108 (69%)
 Frame = +1

Query: 46  MFFFFAGGIEQQVSQVLKKGAGKCINCRSPADLVKYDKVLKLFFVPVWRWPGKDELMHCN 225
           MFFFF GG+EQQV QVLK GAGKCINC S ADLV Y+KVLKLFFVPVWRWPGK+ LMHC 
Sbjct: 1   MFFFFVGGLEQQVLQVLKSGAGKCINCGSRADLVDYEKVLKLFFVPVWRWPGKEPLMHCP 60

Query: 226 NCNXXXXXXXXXXXXXXXXXVVPDVLRCQYCAREVDSEFKFCPFCGSA 369
           +C                   + DVLRC  C R V+S F+FCPFCGSA
Sbjct: 61  DC-------FLFFPPPTRTGPLLDVLRCASCGRPVESNFRFCPFCGSA 101


>ref|XP_002513756.1| conserved hypothetical protein [Ricinus communis]
           gi|223546842|gb|EEF48339.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 112

 Score =  136 bits (343), Expect = 3e-30
 Identities = 61/111 (54%), Positives = 77/111 (69%), Gaps = 3/111 (2%)
 Frame = +1

Query: 46  MFFFFAGGIEQQVSQVLKKGAGKCINCRSPADLVKYDKVLKLFFVPVWRWPGKDELMHCN 225
           MFFFFAGG+EQQVS+VLK G G+C+NC S ADLV+Y+KVLKLFF+PV++WPGK+  M+CN
Sbjct: 1   MFFFFAGGVEQQVSRVLKSGVGRCVNCGSMADLVEYEKVLKLFFIPVYKWPGKEPAMYCN 60

Query: 226 NCN---XXXXXXXXXXXXXXXXXVVPDVLRCQYCAREVDSEFKFCPFCGSA 369
           NCN                     V D LRC +C R  + EF+FCPFCG++
Sbjct: 61  NCNLMFPRSFSFPPPRTDSVSPSAVSDGLRCHFCDRVAEPEFRFCPFCGNS 111


>ref|XP_002891289.1| hypothetical protein ARALYDRAFT_891393 [Arabidopsis lyrata subsp.
           lyrata] gi|297337131|gb|EFH67548.1| hypothetical protein
           ARALYDRAFT_891393 [Arabidopsis lyrata subsp. lyrata]
          Length = 101

 Score =  131 bits (330), Expect = 1e-28
 Identities = 60/108 (55%), Positives = 71/108 (65%)
 Frame = +1

Query: 46  MFFFFAGGIEQQVSQVLKKGAGKCINCRSPADLVKYDKVLKLFFVPVWRWPGKDELMHCN 225
           MFFFF GG+ QQV QVLK GAG CI C S ADLV YDKVLKLFF+PVWRWPGKD L+HC 
Sbjct: 1   MFFFFVGGVGQQVRQVLKSGAGTCIRCGSEADLVDYDKVLKLFFIPVWRWPGKDPLLHCR 60

Query: 226 NCNXXXXXXXXXXXXXXXXXVVPDVLRCQYCAREVDSEFKFCPFCGSA 369
           +C+                     +  C++C R V+ EF+FCPFCGS+
Sbjct: 61  DCDLFFPQSLSPPPV--------SLATCRFCDRVVEPEFRFCPFCGSS 100


>ref|NP_175087.1| uncharacterized protein [Arabidopsis thaliana]
           gi|13876513|gb|AAK43489.1|AC084807_14 hypothetical
           protein [Arabidopsis thaliana]
           gi|44917499|gb|AAS49074.1| At1g44414 [Arabidopsis
           thaliana] gi|332193912|gb|AEE32033.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 101

 Score =  131 bits (330), Expect = 1e-28
 Identities = 60/108 (55%), Positives = 72/108 (66%)
 Frame = +1

Query: 46  MFFFFAGGIEQQVSQVLKKGAGKCINCRSPADLVKYDKVLKLFFVPVWRWPGKDELMHCN 225
           MFFFF GG+ QQV QVLK GAG CI C S ADLV+YDKV+KLFFVPVWRWPGKD L+HC 
Sbjct: 1   MFFFFVGGLGQQVRQVLKSGAGTCIRCGSQADLVEYDKVIKLFFVPVWRWPGKDPLLHCR 60

Query: 226 NCNXXXXXXXXXXXXXXXXXVVPDVLRCQYCAREVDSEFKFCPFCGSA 369
           +C+                     +  C++C R V+ EF+FCPFCGS+
Sbjct: 61  DCDLFFPQSLSPPPV--------SLATCRFCDRVVEPEFRFCPFCGSS 100


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