BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00016388
         (1509 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004142105.1| PREDICTED: DNA topoisomerase 6 subunit A-lik...   673   0.0  
emb|CBI32617.3| unnamed protein product [Vitis vinifera]              672   0.0  
ref|XP_003537243.1| PREDICTED: DNA topoisomerase 6 subunit A-lik...   671   0.0  
ref|XP_002274790.1| PREDICTED: DNA topoisomerase 6 subunit A-lik...   671   0.0  
ref|NP_195902.1| DNA topoisomerase 6 subunit A [Arabidopsis thal...   671   0.0  

>ref|XP_004142105.1| PREDICTED: DNA topoisomerase 6 subunit A-like [Cucumis sativus]
            gi|449521501|ref|XP_004167768.1| PREDICTED: DNA
            topoisomerase 6 subunit A-like [Cucumis sativus]
          Length = 420

 Score =  673 bits (1736), Expect = 0.0
 Identities = 344/424 (81%), Positives = 367/424 (86%)
 Frame = +2

Query: 104  MADKKKRSRRADPTXXXXXXXLPFKKSLKPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 283
            MADK+KR R            LPFK  LKPD                             
Sbjct: 1    MADKRKRRR--SELNSEDEAQLPFKNKLKPDSFILQILKELSDASTASSSSSSKTLDDLG 58

Query: 284  XXXXXXCREVSDLPLSSVQSEIETLALNLARSILAGNGFSFSVPSRSSANQLYVPELDRI 463
                  CREV+DL LSSVQ+ IE++ L +ARSIL+GNGF+F VPSRS ANQLYVPELDRI
Sbjct: 59   LSSS--CREVTDLSLSSVQATIESVILKIARSILSGNGFAFDVPSRSGANQLYVPELDRI 116

Query: 464  VLKDKSSLRPYSSVSTVRKTTITTRILQLIHQLCLKNIHVTKRDLFYTDVKLFQDQTQSD 643
            VLKDK++LRPY+++STVRK+TITTRILQL+HQLC+KNIHVTKRDLFYTDVKLFQDQTQSD
Sbjct: 117  VLKDKTALRPYANISTVRKSTITTRILQLVHQLCIKNIHVTKRDLFYTDVKLFQDQTQSD 176

Query: 644  AVLDDVSCILGCTRSSLNVVAAEKGVVVGRLIFSDNGDLIDCTKMGMGGKAIPPNIDRVG 823
            +VLDDVSCILGCTRSSLNV+AAEKGVVVGRLIFSDNGD+IDCTKMGMGGKAIPPNIDRVG
Sbjct: 177  SVLDDVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVG 236

Query: 824  DMQSDALFILLVEKDAAYMRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPV 1003
            DMQSDALFILLVEKDAAY+RLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPV
Sbjct: 237  DMQSDALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPV 296

Query: 1004 LALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMT 1183
            LALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMT
Sbjct: 297  LALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMT 356

Query: 1184 EQDIKTGKDLLEEDFVKKNQGWVDELNLMVKTKQKAEIQALSSFGFQYLSDVYLPLKLQQ 1363
            EQDIKTGKDLLEEDFVKKN GWV+EL+LMVKTKQKAEIQALSSFGFQYLS+VYLPLKLQQ
Sbjct: 357  EQDIKTGKDLLEEDFVKKNPGWVEELSLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 416

Query: 1364 KDWL 1375
            KDWL
Sbjct: 417  KDWL 420


>emb|CBI32617.3| unnamed protein product [Vitis vinifera]
          Length = 471

 Score =  672 bits (1734), Expect = 0.0
 Identities = 350/432 (81%), Positives = 368/432 (85%)
 Frame = +2

Query: 80   PPLSVSLKMADKKKRSRRADPTXXXXXXXLPFKKSLKPDXXXXXXXXXXXXXXXXXXXXX 259
            PP      MADKKKR RR DP+       LPF+ SLK D                     
Sbjct: 36   PPSRSEEFMADKKKR-RRTDPSDSDQQH-LPFRNSLKSDEIILQTLKDLCSSSSSDGATG 93

Query: 260  XXXXXXXXXXXXXXCREVSDLPLSSVQSEIETLALNLARSILAGNGFSFSVPSRSSANQL 439
                          CREV+DL LSSVQS IETL L L  SIL+G GFSFSVPSRSSANQL
Sbjct: 94   TLTLSDLGLAST--CREVADLSLSSVQSTIETLILRLTHSILSGQGFSFSVPSRSSANQL 151

Query: 440  YVPELDRIVLKDKSSLRPYSSVSTVRKTTITTRILQLIHQLCLKNIHVTKRDLFYTDVKL 619
            YVPELDRIVLKDKSSLRP+++VSTVRK+ +TTRILQLIHQLC KNIHVTKRDLFYTDVKL
Sbjct: 152  YVPELDRIVLKDKSSLRPFANVSTVRKSAVTTRILQLIHQLCTKNIHVTKRDLFYTDVKL 211

Query: 620  FQDQTQSDAVLDDVSCILGCTRSSLNVVAAEKGVVVGRLIFSDNGDLIDCTKMGMGGKAI 799
            FQDQTQSD+VLDDVSC+LGCTRSSLNV+A+EKGVVVGRLIFSDNGD+IDCTKMGMGGKAI
Sbjct: 212  FQDQTQSDSVLDDVSCMLGCTRSSLNVIASEKGVVVGRLIFSDNGDMIDCTKMGMGGKAI 271

Query: 800  PPNIDRVGDMQSDALFILLVEKDAAYMRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKM 979
            PPNIDRVGDMQSDALFILLVEKDAAY+RLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKM
Sbjct: 272  PPNIDRVGDMQSDALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKM 331

Query: 980  KMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIP 1159
            K ELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKY IP
Sbjct: 332  KTELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYSIP 391

Query: 1160 EQCRLPMTEQDIKTGKDLLEEDFVKKNQGWVDELNLMVKTKQKAEIQALSSFGFQYLSDV 1339
            EQCRLPMTEQDIKTGKDLLEEDFVKKN GWV+ELNLMVKTKQKAEIQALSSFGFQYLS+V
Sbjct: 392  EQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEV 451

Query: 1340 YLPLKLQQKDWL 1375
            YLPLKLQQ+DWL
Sbjct: 452  YLPLKLQQQDWL 463


>ref|XP_003537243.1| PREDICTED: DNA topoisomerase 6 subunit A-like [Glycine max]
          Length = 419

 Score =  671 bits (1732), Expect = 0.0
 Identities = 345/424 (81%), Positives = 364/424 (85%)
 Frame = +2

Query: 104  MADKKKRSRRADPTXXXXXXXLPFKKSLKPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 283
            MAD KKR RR DP        LPFK  LKPD                             
Sbjct: 1    MADNKKR-RRKDPAGDE----LPFKNKLKPDSAIMETLKQFSASSSSSSASVSQTLTLQD 55

Query: 284  XXXXXXCREVSDLPLSSVQSEIETLALNLARSILAGNGFSFSVPSRSSANQLYVPELDRI 463
                  CREV+DL LSSVQS IE+L L +A SIL+G+GFSF VPSRS+ANQLYVPELDRI
Sbjct: 56   LSLPFRCREVADLSLSSVQSNIESLILRIAHSILSGHGFSFDVPSRSAANQLYVPELDRI 115

Query: 464  VLKDKSSLRPYSSVSTVRKTTITTRILQLIHQLCLKNIHVTKRDLFYTDVKLFQDQTQSD 643
            VLKDKSSLRP++++STVRK+ IT RILQLIHQLCLK IHVTKRDLFYTDVKLFQDQ QSD
Sbjct: 116  VLKDKSSLRPFANISTVRKSAITARILQLIHQLCLKGIHVTKRDLFYTDVKLFQDQIQSD 175

Query: 644  AVLDDVSCILGCTRSSLNVVAAEKGVVVGRLIFSDNGDLIDCTKMGMGGKAIPPNIDRVG 823
            AVLDDVSC+LGCTRSSLNVVAAEKGVVVGRLIFSDNGD+IDCTKMGMGGKAIPPNIDRVG
Sbjct: 176  AVLDDVSCMLGCTRSSLNVVAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVG 235

Query: 824  DMQSDALFILLVEKDAAYMRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPV 1003
            DMQSDALFILLVEKDAAYMRLAEDRFYNRFPCIIVTAKGQPDV+TRLFLRKMK+ELKLPV
Sbjct: 236  DMQSDALFILLVEKDAAYMRLAEDRFYNRFPCIIVTAKGQPDVSTRLFLRKMKIELKLPV 295

Query: 1004 LALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMT 1183
            LALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLG+RPSDLDKYKIPEQCRLPMT
Sbjct: 296  LALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGVRPSDLDKYKIPEQCRLPMT 355

Query: 1184 EQDIKTGKDLLEEDFVKKNQGWVDELNLMVKTKQKAEIQALSSFGFQYLSDVYLPLKLQQ 1363
            EQDIKTGKDLLEEDFVKKN GWV+EL LMVKTKQKAEIQALS+FGFQYLS+VYLPLKLQQ
Sbjct: 356  EQDIKTGKDLLEEDFVKKNPGWVEELTLMVKTKQKAEIQALSTFGFQYLSEVYLPLKLQQ 415

Query: 1364 KDWL 1375
            KDWL
Sbjct: 416  KDWL 419


>ref|XP_002274790.1| PREDICTED: DNA topoisomerase 6 subunit A-like [Vitis vinifera]
          Length = 420

 Score =  671 bits (1731), Expect = 0.0
 Identities = 348/424 (82%), Positives = 366/424 (86%)
 Frame = +2

Query: 104  MADKKKRSRRADPTXXXXXXXLPFKKSLKPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 283
            MADKKKR RR DP+       LPF+ SLK D                             
Sbjct: 1    MADKKKR-RRTDPSDSDQQH-LPFRNSLKSDEIILQTLKDLCSSSSSDGATGTLTLSDLG 58

Query: 284  XXXXXXCREVSDLPLSSVQSEIETLALNLARSILAGNGFSFSVPSRSSANQLYVPELDRI 463
                  CREV+DL LSSVQS IETL L L  SIL+G GFSFSVPSRSSANQLYVPELDRI
Sbjct: 59   LAST--CREVADLSLSSVQSTIETLILRLTHSILSGQGFSFSVPSRSSANQLYVPELDRI 116

Query: 464  VLKDKSSLRPYSSVSTVRKTTITTRILQLIHQLCLKNIHVTKRDLFYTDVKLFQDQTQSD 643
            VLKDKSSLRP+++VSTVRK+ +TTRILQLIHQLC KNIHVTKRDLFYTDVKLFQDQTQSD
Sbjct: 117  VLKDKSSLRPFANVSTVRKSAVTTRILQLIHQLCTKNIHVTKRDLFYTDVKLFQDQTQSD 176

Query: 644  AVLDDVSCILGCTRSSLNVVAAEKGVVVGRLIFSDNGDLIDCTKMGMGGKAIPPNIDRVG 823
            +VLDDVSC+LGCTRSSLNV+A+EKGVVVGRLIFSDNGD+IDCTKMGMGGKAIPPNIDRVG
Sbjct: 177  SVLDDVSCMLGCTRSSLNVIASEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVG 236

Query: 824  DMQSDALFILLVEKDAAYMRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPV 1003
            DMQSDALFILLVEKDAAY+RLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMK ELKLPV
Sbjct: 237  DMQSDALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKTELKLPV 296

Query: 1004 LALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMT 1183
            LALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKY IPEQCRLPMT
Sbjct: 297  LALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYSIPEQCRLPMT 356

Query: 1184 EQDIKTGKDLLEEDFVKKNQGWVDELNLMVKTKQKAEIQALSSFGFQYLSDVYLPLKLQQ 1363
            EQDIKTGKDLLEEDFVKKN GWV+ELNLMVKTKQKAEIQALSSFGFQYLS+VYLPLKLQQ
Sbjct: 357  EQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 416

Query: 1364 KDWL 1375
            +DWL
Sbjct: 417  QDWL 420


>ref|NP_195902.1| DNA topoisomerase 6 subunit A [Arabidopsis thaliana]
            gi|297806215|ref|XP_002870991.1| hypothetical protein
            ARALYDRAFT_487058 [Arabidopsis lyrata subsp. lyrata]
            gi|75335684|sp|Q9LZ03.1|TOP6A_ARATH RecName: Full=DNA
            topoisomerase 6 subunit A; Short=AtTOP6A; AltName:
            Full=Meiotic recombination protein SPO11-3;
            Short=AtSPO11-3; AltName: Full=Protein BRASSINOSTEROID
            INSENSITIVE 5; AltName: Full=Protein ROOT HAIRLESS 2
            gi|15488539|gb|AAL01152.1|AF323679_1 putative
            topoisomerase VI subunit A [Arabidopsis thaliana]
            gi|7413557|emb|CAB86036.1| meiosis specific-like protein
            [Arabidopsis thaliana] gi|12331186|emb|CAC24689.1|
            topoisomerase 6 subunit A [Arabidopsis thaliana]
            gi|114213517|gb|ABI54341.1| At5g02820 [Arabidopsis
            thaliana] gi|297316828|gb|EFH47250.1| hypothetical
            protein ARALYDRAFT_487058 [Arabidopsis lyrata subsp.
            lyrata] gi|332003139|gb|AED90522.1| DNA topoisomerase 6
            subunit A [Arabidopsis thaliana]
          Length = 427

 Score =  671 bits (1730), Expect = 0.0
 Identities = 346/431 (80%), Positives = 369/431 (85%), Gaps = 7/431 (1%)
 Frame = +2

Query: 104  MADKKKRSRRADPTXXXXXXXLPFKKSLKPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 283
            MADKKKR R  D         LPFK  L+ D                             
Sbjct: 1    MADKKKRKRSKDDEAEE----LPFKSILESDDVITELLKSYISSSIKAAAGAGGASSSSS 56

Query: 284  XXXXXX-------CREVSDLPLSSVQSEIETLALNLARSILAGNGFSFSVPSRSSANQLY 442
                         CREV+DL LSSVQ+EIET+ + +ARSILAG+GFSFSVPSR+++NQLY
Sbjct: 57   KPLTLADLSLSSSCREVADLSLSSVQTEIETVIVQIARSILAGDGFSFSVPSRAASNQLY 116

Query: 443  VPELDRIVLKDKSSLRPYSSVSTVRKTTITTRILQLIHQLCLKNIHVTKRDLFYTDVKLF 622
            VPELDRIVLKDKS+LRP++SVS+VRKTTITTRIL LIHQLCL+NIHVTKRDLFYTDVKLF
Sbjct: 117  VPELDRIVLKDKSTLRPFASVSSVRKTTITTRILALIHQLCLRNIHVTKRDLFYTDVKLF 176

Query: 623  QDQTQSDAVLDDVSCILGCTRSSLNVVAAEKGVVVGRLIFSDNGDLIDCTKMGMGGKAIP 802
            QDQTQSDAVLDDVSC+LGCTRSSLNV+AAEKGVVVGRLIFSDNGD+IDCTKMGMGGKAIP
Sbjct: 177  QDQTQSDAVLDDVSCMLGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIP 236

Query: 803  PNIDRVGDMQSDALFILLVEKDAAYMRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMK 982
            PNIDRVGDMQSDA+FILLVEKDAAYMRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMK
Sbjct: 237  PNIDRVGDMQSDAMFILLVEKDAAYMRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMK 296

Query: 983  MELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPE 1162
            MELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPE
Sbjct: 297  MELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPE 356

Query: 1163 QCRLPMTEQDIKTGKDLLEEDFVKKNQGWVDELNLMVKTKQKAEIQALSSFGFQYLSDVY 1342
            QCRLPMTEQDIKTGKD+LEEDFVKKN GWV+ELNLMVKTKQKAEIQALSSFGFQYLS+VY
Sbjct: 357  QCRLPMTEQDIKTGKDMLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVY 416

Query: 1343 LPLKLQQKDWL 1375
            LPLKLQQ+DWL
Sbjct: 417  LPLKLQQQDWL 427