BLASTX nr result

ID: Panax21_contig00016331 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00016331
         (811 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK36895.1| unknown [Medicago truncatula]                          144   3e-32
ref|XP_003564321.1| PREDICTED: transcription elongation factor 1...   143   4e-32
ref|XP_002437849.1| hypothetical protein SORBIDRAFT_10g003710 [S...   143   5e-32
ref|NP_001060360.1| Os07g0631100 [Oryza sativa Japonica Group] g...   142   7e-32
ref|XP_002316799.1| predicted protein [Populus trichocarpa] gi|2...   141   2e-31

>gb|AFK36895.1| unknown [Medicago truncatula]
          Length = 88

 Score =  144 bits (362), Expect = 3e-32
 Identities = 66/71 (92%), Positives = 69/71 (97%)
 Frame = +1

Query: 271 MDKLDTVFSCPFCNHGSSVECRIDMKNLIGEASCGICQESFSTTITALTEPIDIYSEWID 450
           MDKLDTVFSCPFCNHGSSVECRIDMKNLIGEASCGICQESFSTTITAL+E IDIYSEWID
Sbjct: 16  MDKLDTVFSCPFCNHGSSVECRIDMKNLIGEASCGICQESFSTTITALSEAIDIYSEWID 75

Query: 451 ECERVNTYEEE 483
           ECERVNT E++
Sbjct: 76  ECERVNTVEDD 86


>ref|XP_003564321.1| PREDICTED: transcription elongation factor 1 homolog isoform 1
           [Brachypodium distachyon]
           gi|357125278|ref|XP_003564322.1| PREDICTED:
           transcription elongation factor 1 homolog isoform 2
           [Brachypodium distachyon]
          Length = 89

 Score =  143 bits (361), Expect = 4e-32
 Identities = 65/74 (87%), Positives = 70/74 (94%)
 Frame = +1

Query: 271 MDKLDTVFSCPFCNHGSSVECRIDMKNLIGEASCGICQESFSTTITALTEPIDIYSEWID 450
           MDKLDTVFSCPFCNHGSSVECRIDMKNLIGEA+C ICQE+FSTT+ ALTEPIDIYSEWID
Sbjct: 16  MDKLDTVFSCPFCNHGSSVECRIDMKNLIGEANCRICQENFSTTVNALTEPIDIYSEWID 75

Query: 451 ECERVNTYEEEDVA 492
           ECERVNT E++D A
Sbjct: 76  ECERVNTVEDDDGA 89


>ref|XP_002437849.1| hypothetical protein SORBIDRAFT_10g003710 [Sorghum bicolor]
           gi|195604838|gb|ACG24249.1| hypothetical protein [Zea
           mays] gi|195606448|gb|ACG25054.1| hypothetical protein
           [Zea mays] gi|195609588|gb|ACG26624.1| hypothetical
           protein [Zea mays] gi|195615226|gb|ACG29443.1|
           transcription elongation factor 1 [Zea mays]
           gi|195618278|gb|ACG30969.1| hypothetical protein [Zea
           mays] gi|195621712|gb|ACG32686.1| transcription
           elongation factor 1 [Zea mays]
           gi|195636870|gb|ACG37903.1| hypothetical protein [Zea
           mays] gi|195652807|gb|ACG45871.1| transcription
           elongation factor 1 [Zea mays]
           gi|195652919|gb|ACG45927.1| transcription elongation
           factor 1 [Zea mays] gi|224033669|gb|ACN35910.1| unknown
           [Zea mays] gi|241916072|gb|EER89216.1| hypothetical
           protein SORBIDRAFT_10g003710 [Sorghum bicolor]
           gi|413923721|gb|AFW63653.1| transcription elongation
           factor 1 [Zea mays] gi|414878997|tpg|DAA56128.1| TPA:
           transcription elongation factor 1 isoform 1 [Zea mays]
           gi|414878998|tpg|DAA56129.1| TPA: transcription
           elongation factor 1 isoform 2 [Zea mays]
          Length = 89

 Score =  143 bits (360), Expect = 5e-32
 Identities = 66/74 (89%), Positives = 69/74 (93%)
 Frame = +1

Query: 271 MDKLDTVFSCPFCNHGSSVECRIDMKNLIGEASCGICQESFSTTITALTEPIDIYSEWID 450
           MDKLDTVFSCPFCNHGSSVECRIDMKNLIGEASC ICQE+FSTT+ ALTEPIDIYSEWID
Sbjct: 16  MDKLDTVFSCPFCNHGSSVECRIDMKNLIGEASCRICQENFSTTVNALTEPIDIYSEWID 75

Query: 451 ECERVNTYEEEDVA 492
           ECERVNT E +D A
Sbjct: 76  ECERVNTVEGDDDA 89


>ref|NP_001060360.1| Os07g0631100 [Oryza sativa Japonica Group]
           gi|25453308|sp|Q8LHP0.1|ELOF1_ORYSJ RecName:
           Full=Transcription elongation factor 1 homolog
           gi|22296365|dbj|BAC10134.1| unknown protein [Oryza
           sativa Japonica Group] gi|113611896|dbj|BAF22274.1|
           Os07g0631100 [Oryza sativa Japonica Group]
           gi|125538787|gb|EAY85182.1| hypothetical protein
           OsI_06540 [Oryza sativa Indica Group]
           gi|125601184|gb|EAZ40760.1| hypothetical protein
           OsJ_25233 [Oryza sativa Japonica Group]
          Length = 89

 Score =  142 bits (359), Expect = 7e-32
 Identities = 65/74 (87%), Positives = 69/74 (93%)
 Frame = +1

Query: 271 MDKLDTVFSCPFCNHGSSVECRIDMKNLIGEASCGICQESFSTTITALTEPIDIYSEWID 450
           MDKLDTVFSCPFCNHGSSVECRIDMKNLIGEASC ICQE+FSTT+ ALTEPIDIYSEWID
Sbjct: 16  MDKLDTVFSCPFCNHGSSVECRIDMKNLIGEASCRICQENFSTTVNALTEPIDIYSEWID 75

Query: 451 ECERVNTYEEEDVA 492
           ECERVN  E++D A
Sbjct: 76  ECERVNNVEDDDGA 89


>ref|XP_002316799.1| predicted protein [Populus trichocarpa] gi|222859864|gb|EEE97411.1|
           predicted protein [Populus trichocarpa]
          Length = 157

 Score =  141 bits (355), Expect = 2e-31
 Identities = 64/71 (90%), Positives = 68/71 (95%)
 Frame = +1

Query: 271 MDKLDTVFSCPFCNHGSSVECRIDMKNLIGEASCGICQESFSTTITALTEPIDIYSEWID 450
           MDKLDTVFSCPFCNHG+SVECRIDMKNLIGEA CGICQESFS TITALTEPIDIYSEWID
Sbjct: 85  MDKLDTVFSCPFCNHGTSVECRIDMKNLIGEAVCGICQESFSMTITALTEPIDIYSEWID 144

Query: 451 ECERVNTYEEE 483
           ECERVN+ E++
Sbjct: 145 ECERVNSLEDD 155


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