BLASTX nr result
ID: Panax21_contig00016325
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00016325 (543 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002273814.1| PREDICTED: DNA repair and recombination prot... 259 1e-67 emb|CAN62867.1| hypothetical protein VITISV_015925 [Vitis vinifera] 259 1e-67 ref|XP_003540522.1| PREDICTED: DNA repair protein rhp54-like [Gl... 256 2e-66 ref|XP_002275596.1| PREDICTED: DNA repair and recombination prot... 254 8e-66 ref|XP_004170971.1| PREDICTED: SWI/SNF-related matrix-associated... 246 1e-63 >ref|XP_002273814.1| PREDICTED: DNA repair and recombination protein RAD54-like [Vitis vinifera] Length = 903 Score = 259 bits (663), Expect = 1e-67 Identities = 133/185 (71%), Positives = 152/185 (82%), Gaps = 5/185 (2%) Frame = -3 Query: 541 VIQDLREMTRKVLHYYKGDFLDELPGLVDFTVFLNLSPRQKREVKELKKLGRKFKINSDG 362 VIQDLREMT KVLHYYKGDFLDELPGLVDFTV LNLS RQK+EV L K RKFK NS G Sbjct: 605 VIQDLREMTSKVLHYYKGDFLDELPGLVDFTVLLNLSARQKKEVGNLNKFERKFKKNSVG 664 Query: 361 SAIYVHPQLKY----LTKNSGVKDRVD-QLKIDEMLEKLDEKEGVKAKFYLNLLRLCDSS 197 SA+Y+HPQLKY L N D + Q K+DE+LE+LD ++GVKAKF+LN+L LC SS Sbjct: 665 SAVYLHPQLKYFAEKLAANESKTDEMTCQKKMDEILEQLDVRDGVKAKFFLNVLALCQSS 724 Query: 196 GEKLLVFSQYLLPIKFLERLTVKVKGWSPGKEVFMITGDSDSEVRESHMDRFNNSPDARV 17 GEKLLVFSQYLLP++FLE+LT+KVKGWSPGKE+F I+G+S SE RE M+RFN SPDARV Sbjct: 725 GEKLLVFSQYLLPLRFLEKLTMKVKGWSPGKEIFAISGESSSEQREWSMERFNTSPDARV 784 Query: 16 FFGSI 2 FFGSI Sbjct: 785 FFGSI 789 >emb|CAN62867.1| hypothetical protein VITISV_015925 [Vitis vinifera] Length = 1187 Score = 259 bits (663), Expect = 1e-67 Identities = 133/185 (71%), Positives = 152/185 (82%), Gaps = 5/185 (2%) Frame = -3 Query: 541 VIQDLREMTRKVLHYYKGDFLDELPGLVDFTVFLNLSPRQKREVKELKKLGRKFKINSDG 362 VIQDLREMT KVLHYYKGDFLDELPGLVDFTV LNLS RQK+EV L K RKFK NS G Sbjct: 831 VIQDLREMTSKVLHYYKGDFLDELPGLVDFTVLLNLSARQKKEVGNLNKFERKFKKNSVG 890 Query: 361 SAIYVHPQLKY----LTKNSGVKDRVD-QLKIDEMLEKLDEKEGVKAKFYLNLLRLCDSS 197 SA+Y+HPQLKY L N D + Q K+DE+LE+LD ++GVKAKF+LN+L LC SS Sbjct: 891 SAVYLHPQLKYFAEKLAANESKTDEMTCQKKMDEILEQLDVRDGVKAKFFLNVLALCQSS 950 Query: 196 GEKLLVFSQYLLPIKFLERLTVKVKGWSPGKEVFMITGDSDSEVRESHMDRFNNSPDARV 17 GEKLLVFSQYLLP++FLE+LT+KVKGWSPGKE+F I+G+S SE RE M+RFN SPDARV Sbjct: 951 GEKLLVFSQYLLPLRFLEKLTMKVKGWSPGKEIFAISGESSSEQREWSMERFNTSPDARV 1010 Query: 16 FFGSI 2 FFGSI Sbjct: 1011 FFGSI 1015 >ref|XP_003540522.1| PREDICTED: DNA repair protein rhp54-like [Glycine max] Length = 883 Score = 256 bits (654), Expect = 2e-66 Identities = 127/181 (70%), Positives = 155/181 (85%), Gaps = 1/181 (0%) Frame = -3 Query: 541 VIQDLREMTRKVLHYYKGDFLDELPGLVDFTVFLNLSPRQKREVKELKKLGR-KFKINSD 365 VIQDLREMT KVLHYYKGDFLDELPGLVDFTV L LSPRQK E+++LKKL R KFKINS Sbjct: 590 VIQDLREMTSKVLHYYKGDFLDELPGLVDFTVVLTLSPRQKPEIQKLKKLSRRKFKINSV 649 Query: 364 GSAIYVHPQLKYLTKNSGVKDRVDQLKIDEMLEKLDEKEGVKAKFYLNLLRLCDSSGEKL 185 GSA+Y+HP+LK L +N G D + +D+++EKLD ++GVK+KFY N+L LC+S+GEKL Sbjct: 650 GSAVYLHPKLKPLAENCGENSTSDNI-MDDLIEKLDMRDGVKSKFYYNMLNLCESAGEKL 708 Query: 184 LVFSQYLLPIKFLERLTVKVKGWSPGKEVFMITGDSDSEVRESHMDRFNNSPDARVFFGS 5 LVFSQYLLP+K+LERLT+K KGWS G+E+F+I+G+S SE RE M++FNNSPDARVFFGS Sbjct: 709 LVFSQYLLPLKYLERLTMKWKGWSLGREIFVISGESSSEQREWSMEKFNNSPDARVFFGS 768 Query: 4 I 2 I Sbjct: 769 I 769 >ref|XP_002275596.1| PREDICTED: DNA repair and recombination protein RAD54-like [Vitis vinifera] Length = 944 Score = 254 bits (648), Expect = 8e-66 Identities = 130/185 (70%), Positives = 150/185 (81%), Gaps = 5/185 (2%) Frame = -3 Query: 541 VIQDLREMTRKVLHYYKGDFLDELPGLVDFTVFLNLSPRQKREVKELKKLGRKFKINSDG 362 VIQDLREMT KVLHYYKGDFLDELPGLVDFTV LNLS RQK+EV L K RKFK NS G Sbjct: 646 VIQDLREMTSKVLHYYKGDFLDELPGLVDFTVLLNLSARQKKEVGNLNKFERKFKKNSVG 705 Query: 361 SAIYVHPQLKY----LTKNSGVKDRVD-QLKIDEMLEKLDEKEGVKAKFYLNLLRLCDSS 197 SA+Y+HPQLKY L N D + Q K+DE+LE+LD +EGVK KF+LN+L LC S+ Sbjct: 706 SAVYLHPQLKYFAEKLAANESKTDEMTYQKKMDEILEQLDVREGVKVKFFLNVLALCQSA 765 Query: 196 GEKLLVFSQYLLPIKFLERLTVKVKGWSPGKEVFMITGDSDSEVRESHMDRFNNSPDARV 17 GEKLLVFSQYLLP++FLE+LT+KV GWS GKE+F+I+G+S SE RE M+RFN SPDARV Sbjct: 766 GEKLLVFSQYLLPLRFLEKLTMKVNGWSSGKEIFVISGESSSEQREWSMERFNTSPDARV 825 Query: 16 FFGSI 2 FFGSI Sbjct: 826 FFGSI 830 >ref|XP_004170971.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1B-like [Cucumis sativus] Length = 903 Score = 246 bits (629), Expect = 1e-63 Identities = 120/180 (66%), Positives = 148/180 (82%) Frame = -3 Query: 541 VIQDLREMTRKVLHYYKGDFLDELPGLVDFTVFLNLSPRQKREVKELKKLGRKFKINSDG 362 VI DLREMT K+LHYYKGDFLDELPGLVDFTV LNL+ +QK E +++KK RKFKI+S G Sbjct: 614 VIHDLREMTSKILHYYKGDFLDELPGLVDFTVVLNLTSKQKHEGEKVKKFNRKFKISSAG 673 Query: 361 SAIYVHPQLKYLTKNSGVKDRVDQLKIDEMLEKLDEKEGVKAKFYLNLLRLCDSSGEKLL 182 SA+Y+HP+L + N+ V D KIDE+++K+D K+GVK KF+LNLL LC ++GEKLL Sbjct: 674 SAVYLHPKLNVFSVNAAVTDD----KIDEVIDKMDVKDGVKTKFFLNLLNLCATTGEKLL 729 Query: 181 VFSQYLLPIKFLERLTVKVKGWSPGKEVFMITGDSDSEVRESHMDRFNNSPDARVFFGSI 2 VFSQYLLP+KF+ERL V+ KGWSPG+E FMI+G++ E RE M+RFNNSPDARVFFGSI Sbjct: 730 VFSQYLLPLKFMERLVVQKKGWSPGRETFMISGETTPEQREWSMERFNNSPDARVFFGSI 789