BLASTX nr result

ID: Panax21_contig00016305 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00016305
         (770 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28180.3| unnamed protein product [Vitis vinifera]              342   5e-92
ref|XP_002285108.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   342   5e-92
ref|XP_002524471.1| dead box ATP-dependent RNA helicase, putativ...   326   4e-87
ref|NP_001068221.1| Os11g0599500 [Oryza sativa Japonica Group] g...   318   8e-85
gb|EAZ18899.1| hypothetical protein OsJ_34439 [Oryza sativa Japo...   318   8e-85

>emb|CBI28180.3| unnamed protein product [Vitis vinifera]
          Length = 916

 Score =  342 bits (877), Expect = 5e-92
 Identities = 171/217 (78%), Positives = 191/217 (88%)
 Frame = +1

Query: 115  NPFDAFEKFDELEVVEDTSGGNGINFDAYEDIPVEASGSDIPPPAISFAEIDLGKALNDN 294
            +PFD  EKFDELE VEDT+GG  INFDAYEDIPVEASGSDIPPP  +FAEI LG+ LN N
Sbjct: 376  SPFDGSEKFDELEEVEDTNGGLSINFDAYEDIPVEASGSDIPPPVSAFAEIHLGEGLNQN 435

Query: 295  IKRCKYVKPTPVQRYAIPVALAGRDLMACAQTGSGKTAAFCFPIISGILRQNLTVVPDRQ 474
            I+RCKYVKPTP+QR+AIP+A+AGRDLMACAQTGSGKTAAFCFPII GILR  L+      
Sbjct: 436  IRRCKYVKPTPIQRHAIPIAMAGRDLMACAQTGSGKTAAFCFPIICGILRNQLS---RGG 492

Query: 475  MRVASPVALILSPTRELSCQIYEEARKFSYQTGVKVVVAYGGAPIIQQLRNLEKGVDILV 654
             R+A P ALILSPTRELSCQI+EEA+KFSY+TG+KVVVAYGGAPI QQ RNLE+GVDILV
Sbjct: 493  ARLACPTALILSPTRELSCQIHEEAKKFSYKTGLKVVVAYGGAPISQQFRNLERGVDILV 552

Query: 655  ATPGRLVDMIDRANISLKRIKFLALDEADRMLDMGFE 765
            ATPGRLVDMI+RA +SL+ IK+LALDEADRMLDMGFE
Sbjct: 553  ATPGRLVDMIERARVSLRMIKYLALDEADRMLDMGFE 589


>ref|XP_002285108.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 37-like [Vitis
           vinifera]
          Length = 615

 Score =  342 bits (877), Expect = 5e-92
 Identities = 171/217 (78%), Positives = 191/217 (88%)
 Frame = +1

Query: 115 NPFDAFEKFDELEVVEDTSGGNGINFDAYEDIPVEASGSDIPPPAISFAEIDLGKALNDN 294
           +PFD  EKFDELE VEDT+GG  INFDAYEDIPVEASGSDIPPP  +FAEI LG+ LN N
Sbjct: 88  SPFDGSEKFDELEEVEDTNGGLSINFDAYEDIPVEASGSDIPPPVSAFAEIHLGEGLNQN 147

Query: 295 IKRCKYVKPTPVQRYAIPVALAGRDLMACAQTGSGKTAAFCFPIISGILRQNLTVVPDRQ 474
           I+RCKYVKPTP+QR+AIP+A+AGRDLMACAQTGSGKTAAFCFPII GILR  L+      
Sbjct: 148 IRRCKYVKPTPIQRHAIPIAMAGRDLMACAQTGSGKTAAFCFPIICGILRNQLS---RGG 204

Query: 475 MRVASPVALILSPTRELSCQIYEEARKFSYQTGVKVVVAYGGAPIIQQLRNLEKGVDILV 654
            R+A P ALILSPTRELSCQI+EEA+KFSY+TG+KVVVAYGGAPI QQ RNLE+GVDILV
Sbjct: 205 ARLACPTALILSPTRELSCQIHEEAKKFSYKTGLKVVVAYGGAPISQQFRNLERGVDILV 264

Query: 655 ATPGRLVDMIDRANISLKRIKFLALDEADRMLDMGFE 765
           ATPGRLVDMI+RA +SL+ IK+LALDEADRMLDMGFE
Sbjct: 265 ATPGRLVDMIERARVSLRMIKYLALDEADRMLDMGFE 301


>ref|XP_002524471.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223536259|gb|EEF37911.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 604

 Score =  326 bits (835), Expect = 4e-87
 Identities = 163/222 (73%), Positives = 189/222 (85%), Gaps = 5/222 (2%)
 Frame = +1

Query: 115 NPFDAF-EKFDELEVVEDTSGGNGINFDAYEDIPVEASGSDIPPPAISFAEIDLGKALND 291
           NP+D   E+FDELEV+ED +    INFDAYEDIPV+ SGSD+P PA +F+EIDLGK LN+
Sbjct: 93  NPYDNLSERFDELEVIEDDNVNCVINFDAYEDIPVKVSGSDVPKPAKAFSEIDLGKGLNE 152

Query: 292 NIKRCKYVKPTPVQRYAIPVALAGRDLMACAQTGSGKTAAFCFPIISGILRQNLTVV--- 462
           NI+RCKYVKPTP+Q+YA+P+AL+GRDLMACAQTGSGKTAAFCFPIIS IL+QN  +V   
Sbjct: 153 NIRRCKYVKPTPIQKYALPIALSGRDLMACAQTGSGKTAAFCFPIISLILKQNQPIVGSG 212

Query: 463 -PDRQMRVASPVALILSPTRELSCQIYEEARKFSYQTGVKVVVAYGGAPIIQQLRNLEKG 639
             D     ASP ALILSPTRELSCQI+EEA+KF+Y TGVK+VVAYGGAPI+ Q RNLEKG
Sbjct: 213 RGDGGTHTASPSALILSPTRELSCQIHEEAQKFAYNTGVKIVVAYGGAPIVHQFRNLEKG 272

Query: 640 VDILVATPGRLVDMIDRANISLKRIKFLALDEADRMLDMGFE 765
           VDILVATPGRLVDMI+R  +SL  +K+LALDEADRMLDMGFE
Sbjct: 273 VDILVATPGRLVDMIERGRVSLGMVKYLALDEADRMLDMGFE 314


>ref|NP_001068221.1| Os11g0599500 [Oryza sativa Japonica Group]
           gi|122206897|sp|Q2R1M8.1|RH52C_ORYSJ RecName:
           Full=DEAD-box ATP-dependent RNA helicase 52C
           gi|77551918|gb|ABA94715.1| DEAD-box protein 3,
           X-chromosomal, putative, expressed [Oryza sativa
           Japonica Group] gi|113645443|dbj|BAF28584.1|
           Os11g0599500 [Oryza sativa Japonica Group]
          Length = 623

 Score =  318 bits (815), Expect = 8e-85
 Identities = 163/222 (73%), Positives = 185/222 (83%), Gaps = 1/222 (0%)
 Frame = +1

Query: 103 NPIPNPFDAFEKFDELEVVEDTSGGNGINFDAYEDIPVEASGSDIPPPAISFAEIDLGKA 282
           NP  N  DA     +   V D     GINFDAYEDIPVE SG ++PPP  +FAEIDLG+A
Sbjct: 106 NPFGNDGDAAAGAGDEPEVFDAHQNTGINFDAYEDIPVETSGREVPPPVGTFAEIDLGQA 165

Query: 283 LNDNIKRCKYVKPTPVQRYAIPVALAGRDLMACAQTGSGKTAAFCFPIISGILRQNLTVV 462
           LNDNI+RCKYV+PTPVQRYAIP++LAGRDLMACAQTGSGKTAAFCFPIISGI+R      
Sbjct: 166 LNDNIRRCKYVRPTPVQRYAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMRGPPAQR 225

Query: 463 PDR-QMRVASPVALILSPTRELSCQIYEEARKFSYQTGVKVVVAYGGAPIIQQLRNLEKG 639
           P R  MR A P+ALILSPTRELS QI+EEARKFSYQTGV+VVVAYGGAPI QQLR+LE+G
Sbjct: 226 PQRGGMRTACPLALILSPTRELSMQIHEEARKFSYQTGVRVVVAYGGAPINQQLRDLERG 285

Query: 640 VDILVATPGRLVDMIDRANISLKRIKFLALDEADRMLDMGFE 765
           VDILVATPGRLVD+++RA +SL+ I++LALDEADRMLDMGFE
Sbjct: 286 VDILVATPGRLVDLLERARVSLQSIRYLALDEADRMLDMGFE 327


>gb|EAZ18899.1| hypothetical protein OsJ_34439 [Oryza sativa Japonica Group]
          Length = 541

 Score =  318 bits (815), Expect = 8e-85
 Identities = 163/222 (73%), Positives = 185/222 (83%), Gaps = 1/222 (0%)
 Frame = +1

Query: 103 NPIPNPFDAFEKFDELEVVEDTSGGNGINFDAYEDIPVEASGSDIPPPAISFAEIDLGKA 282
           NP  N  DA     +   V D     GINFDAYEDIPVE SG ++PPP  +FAEIDLG+A
Sbjct: 24  NPFGNDGDAAAGAGDEPEVFDAHQNTGINFDAYEDIPVETSGREVPPPVGTFAEIDLGQA 83

Query: 283 LNDNIKRCKYVKPTPVQRYAIPVALAGRDLMACAQTGSGKTAAFCFPIISGILRQNLTVV 462
           LNDNI+RCKYV+PTPVQRYAIP++LAGRDLMACAQTGSGKTAAFCFPIISGI+R      
Sbjct: 84  LNDNIRRCKYVRPTPVQRYAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMRGPPAQR 143

Query: 463 PDR-QMRVASPVALILSPTRELSCQIYEEARKFSYQTGVKVVVAYGGAPIIQQLRNLEKG 639
           P R  MR A P+ALILSPTRELS QI+EEARKFSYQTGV+VVVAYGGAPI QQLR+LE+G
Sbjct: 144 PQRGGMRTACPLALILSPTRELSMQIHEEARKFSYQTGVRVVVAYGGAPINQQLRDLERG 203

Query: 640 VDILVATPGRLVDMIDRANISLKRIKFLALDEADRMLDMGFE 765
           VDILVATPGRLVD+++RA +SL+ I++LALDEADRMLDMGFE
Sbjct: 204 VDILVATPGRLVDLLERARVSLQSIRYLALDEADRMLDMGFE 245


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