BLASTX nr result

ID: Panax21_contig00016301 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00016301
         (1150 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633650.1| PREDICTED: uncharacterized protein LOC100852...   126   3e-43
ref|XP_004134458.1| PREDICTED: uncharacterized protein LOC101203...   103   4e-40
ref|XP_003542886.1| PREDICTED: RING finger protein 157-like [Gly...   107   7e-40
ref|XP_002277630.1| PREDICTED: uncharacterized protein LOC100266...   108   8e-40
emb|CBI26184.3| unnamed protein product [Vitis vinifera]              108   8e-40

>ref|XP_003633650.1| PREDICTED: uncharacterized protein LOC100852866 [Vitis vinifera]
          Length = 660

 Score =  126 bits (316), Expect(2) = 3e-43
 Identities = 89/213 (41%), Positives = 113/213 (53%), Gaps = 11/213 (5%)
 Frame = +1

Query: 367 PPVYVDH--PKKINNYVNVHQDSIRFEVDEKNKYCYLKVAI*FXXXXXXXXXAVSPYFTL 540
           PP YVDH   +KI N VNVH+D+IR + DEKN   +L   + F             YF  
Sbjct: 37  PPPYVDHMSARKIKNDVNVHKDTIRVDWDEKNLDSHL---VSFTFDALVDGSITIFYFAK 93

Query: 541 PKKE----PTVLSLHYTLRSINL*E*FFMKDWVRNFINHLERALT*A--VLTWMTYQSHI 702
                   P    ++  +R        F     + F       +      L  ++  S  
Sbjct: 94  EGNNCSFTPLYPEIYMPIRIP------FQNGLGQKFCQRSGTGIDLGFFALDDLSRPSQN 147

Query: 703 KDVFPLVICAESCMPS---MDEQLDEPPSITSPNAQITRAVLEKNNDGHFPVKVINQIL* 873
           ++VFPLVI AES +PS   M EQL +PP I    AQIT+AVLEKNN+GHF VKVI QIL 
Sbjct: 148 EEVFPLVIYAESSLPSLPPMHEQLGQPPPIAPSRAQITQAVLEKNNEGHFQVKVIKQILW 207

Query: 874 ADGVRYELRKIFGINNSDETTTKDHLLGKECVI 972
            DGVRYELR+++GI NSDE    ++  GKECVI
Sbjct: 208 VDGVRYELRELYGIENSDERGIGNNDTGKECVI 240



 Score = 76.6 bits (187), Expect(2) = 3e-43
 Identities = 29/46 (63%), Positives = 39/46 (84%)
 Frame = +3

Query: 978  TDPKDTAVLPCRHMCMCSSCAKELRFQSDKCPICRELIEEFLEIKV 1115
            T+P DT VLPCRH+C+CS CAK+LR QS+KCP+CR  I+E +++KV
Sbjct: 243  TEPNDTVVLPCRHVCLCSECAKQLRLQSNKCPVCRHPIQELIDLKV 288


>ref|XP_004134458.1| PREDICTED: uncharacterized protein LOC101203938 [Cucumis sativus]
           gi|449521981|ref|XP_004168007.1| PREDICTED:
           uncharacterized LOC101203938 [Cucumis sativus]
          Length = 574

 Score =  103 bits (258), Expect(2) = 4e-40
 Identities = 81/220 (36%), Positives = 110/220 (50%), Gaps = 13/220 (5%)
 Frame = +1

Query: 352 RVPFRPPVYVDHP---------KKINNYVNVHQDSIRFEVDEKNKYCYLKVAI*FXXXXX 504
           R P  PP+    P         KK+ N VNVH+D+++ EVDE+N   +L   + F     
Sbjct: 308 RPPMGPPLLPPPPLPIVEHRQAKKVRNDVNVHKDTLKIEVDEQNPDHHL---VSFVFDAL 364

Query: 505 XXXXAVSPYFTLPKKEPTVLSLHYTLRSINL*E*FFMKDWVRNFINHLERALT*AV--LT 678
                   +F   K+EP    +     +    +  F K   + F   +          L 
Sbjct: 365 YDGSITILFFA--KEEPNCRFVPVYPDAFKPVKIPFQKGPAQKFFQPVGTGFDLGFFDLD 422

Query: 679 WMTYQSHIKDVFPLVICAESCMPSM--DEQLDEPPSITSPNAQITRAVLEKNNDGHFPVK 852
            ++  S  +D FPLVI AE+C PS   DE++ EP    S + QIT+AVLEK N G F V+
Sbjct: 423 DLSKPSPAEDTFPLVISAETCSPSQSDDERIGEPHRDNS-HMQITQAVLEKKNGGPFQVR 481

Query: 853 VINQIL*ADGVRYELRKIFGINNSDETTTKDHLLGKECVI 972
           VI Q+L  DGVRYELR+IFGI +S      D+  GKECVI
Sbjct: 482 VIRQLLWIDGVRYELREIFGIGSSSAEGFDDNDTGKECVI 521



 Score = 88.6 bits (218), Expect(2) = 4e-40
 Identities = 36/50 (72%), Positives = 45/50 (90%)
 Frame = +3

Query: 978  TDPKDTAVLPCRHMCMCSSCAKELRFQSDKCPICRELIEEFLEIKVNEAN 1127
            T+PKDTAVLPCRH+CMCS CAKELR QS+KCPICR+ IEE +EI++N ++
Sbjct: 524  TEPKDTAVLPCRHLCMCSECAKELRLQSNKCPICRQPIEELIEIRINNSD 573


>ref|XP_003542886.1| PREDICTED: RING finger protein 157-like [Glycine max]
          Length = 371

 Score =  107 bits (266), Expect(2) = 7e-40
 Identities = 81/212 (38%), Positives = 113/212 (53%), Gaps = 10/212 (4%)
 Frame = +1

Query: 367 PPVYVDHP--KKINNYVNVHQDSIRFEVDEKNKYCYLKVAI*FXXXXXXXXXAVSPYFTL 540
           PP YVDH   KKI NYVNVH+D++R EVD+ N   +L   + F             YF  
Sbjct: 115 PPPYVDHQTAKKIRNYVNVHKDTLRLEVDDHNPDLHL---LSFVFDAVYDGSITILYFAK 171

Query: 541 PKKEPTVLSLH-YTLRSINL*E*FFMKDWVRNFINHLERALT*AV--LTWMTYQSHIKDV 711
            +++   + L+    + + +    F K   + F       +      L  ++  S  +DV
Sbjct: 172 EEEKCRFVPLYPEAFQPVRIP---FQKGVGQKFAQPSGTGIDLGFFELDDLSKPSPGEDV 228

Query: 712 FPLVICAESCMPSMDEQLDEPPSIT----SPNAQITRAVLEKNND-GHFPVKVINQIL*A 876
           FPLVICAE+ + +  E  DE P  +    SP+ QIT+ VLEK+N  G F +KV+ QIL  
Sbjct: 229 FPLVICAETSLKTTSE--DETPGDSLLDASPHMQITQGVLEKSNGAGPFLIKVVKQILWI 286

Query: 877 DGVRYELRKIFGINNSDETTTKDHLLGKECVI 972
           DGVRYELR+++GI NS      D+  GKECVI
Sbjct: 287 DGVRYELRELYGIGNSSAADFDDNDPGKECVI 318



 Score = 84.7 bits (208), Expect(2) = 7e-40
 Identities = 36/51 (70%), Positives = 42/51 (82%)
 Frame = +3

Query: 978  TDPKDTAVLPCRHMCMCSSCAKELRFQSDKCPICRELIEEFLEIKVNEANN 1130
            T+PKDTAVLPCRHMCMCS CA   R QS+KCPICR+ IEE +EIKVN  ++
Sbjct: 321  TEPKDTAVLPCRHMCMCSECANAHRLQSNKCPICRQSIEELIEIKVNNGDH 371


>ref|XP_002277630.1| PREDICTED: uncharacterized protein LOC100266660 [Vitis vinifera]
          Length = 563

 Score =  103 bits (256), Expect(2) = 8e-40
 Identities = 81/215 (37%), Positives = 109/215 (50%), Gaps = 10/215 (4%)
 Frame = +1

Query: 358 PFRPPVYVDHP--KKINNYVNVHQDSIRFEVDEKNKYCYLKVAI*FXXXXXXXXXAVSPY 531
           P +PP YV+H   KK+ N VNVH+D++R EVDE+N   YL   + F             Y
Sbjct: 306 PQQPPPYVEHQNAKKVRNDVNVHKDTLRLEVDEQNPDHYL---VSFIFDALFDGSITIYY 362

Query: 532 FTLPKKE----PTVLSLHYTLRSINL*E*FFMKDWVRNFINHLERALT*AV--LTWMTYQ 693
           F   +      P     +  +R        F K   + F       +      L  ++  
Sbjct: 363 FAKEESNCRFSPLFPEAYMPVRIP------FQKGPGQKFRQPSGTGIDLGFFELDDLSKP 416

Query: 694 SHIKDVFPLVICAESCMP--SMDEQLDEPPSITSPNAQITRAVLEKNNDGHFPVKVINQI 867
           S  +DVFPLVI AE+ +P    DE   +P   TSP+ QIT+AVLEK+N   F V+VI QI
Sbjct: 417 SPGEDVFPLVISAETSLPLHPTDEHSGDPTPRTSPHMQITQAVLEKHNGDPFQVRVIRQI 476

Query: 868 L*ADGVRYELRKIFGINNSDETTTKDHLLGKECVI 972
           L  + VRYELR+I+GI +S      D+  GKECVI
Sbjct: 477 LWVNEVRYELREIYGIASSASEGFNDNDSGKECVI 511



 Score = 88.2 bits (217), Expect(2) = 8e-40
 Identities = 37/47 (78%), Positives = 43/47 (91%)
 Frame = +3

Query: 978  TDPKDTAVLPCRHMCMCSSCAKELRFQSDKCPICRELIEEFLEIKVN 1118
            T+PKDTAVLPCRHMCMCS CAKELR QS+KCPICR+ IEE +EIK++
Sbjct: 514  TEPKDTAVLPCRHMCMCSECAKELRLQSNKCPICRQPIEELIEIKID 560



 Score =  108 bits (271), Expect = 2e-21
 Identities = 49/76 (64%), Positives = 61/76 (80%)
 Frame = +3

Query: 480 YLISFTFDAIVDGSISIFYFAKEGANCTFSPLYPEIHKPVRIIFHEGLGQKFHQSSGTGL 659
           YL+SF FDA+ DGSI+I+YFAKE +NC FSPL+PE + PVRI F +G GQKF Q SGTG+
Sbjct: 344 YLVSFIFDALFDGSITIYYFAKEESNCRFSPLFPEAYMPVRIPFQKGPGQKFRQPSGTGI 403

Query: 660 DLGCLDMDDISKPYQG 707
           DLG  ++DD+SKP  G
Sbjct: 404 DLGFFELDDLSKPSPG 419


>emb|CBI26184.3| unnamed protein product [Vitis vinifera]
          Length = 351

 Score =  103 bits (256), Expect(2) = 8e-40
 Identities = 81/215 (37%), Positives = 109/215 (50%), Gaps = 10/215 (4%)
 Frame = +1

Query: 358 PFRPPVYVDHP--KKINNYVNVHQDSIRFEVDEKNKYCYLKVAI*FXXXXXXXXXAVSPY 531
           P +PP YV+H   KK+ N VNVH+D++R EVDE+N   YL   + F             Y
Sbjct: 94  PQQPPPYVEHQNAKKVRNDVNVHKDTLRLEVDEQNPDHYL---VSFIFDALFDGSITIYY 150

Query: 532 FTLPKKE----PTVLSLHYTLRSINL*E*FFMKDWVRNFINHLERALT*AV--LTWMTYQ 693
           F   +      P     +  +R        F K   + F       +      L  ++  
Sbjct: 151 FAKEESNCRFSPLFPEAYMPVRIP------FQKGPGQKFRQPSGTGIDLGFFELDDLSKP 204

Query: 694 SHIKDVFPLVICAESCMP--SMDEQLDEPPSITSPNAQITRAVLEKNNDGHFPVKVINQI 867
           S  +DVFPLVI AE+ +P    DE   +P   TSP+ QIT+AVLEK+N   F V+VI QI
Sbjct: 205 SPGEDVFPLVISAETSLPLHPTDEHSGDPTPRTSPHMQITQAVLEKHNGDPFQVRVIRQI 264

Query: 868 L*ADGVRYELRKIFGINNSDETTTKDHLLGKECVI 972
           L  + VRYELR+I+GI +S      D+  GKECVI
Sbjct: 265 LWVNEVRYELREIYGIASSASEGFNDNDSGKECVI 299



 Score = 88.2 bits (217), Expect(2) = 8e-40
 Identities = 37/47 (78%), Positives = 43/47 (91%)
 Frame = +3

Query: 978  TDPKDTAVLPCRHMCMCSSCAKELRFQSDKCPICRELIEEFLEIKVN 1118
            T+PKDTAVLPCRHMCMCS CAKELR QS+KCPICR+ IEE +EIK++
Sbjct: 302  TEPKDTAVLPCRHMCMCSECAKELRLQSNKCPICRQPIEELIEIKID 348



 Score =  108 bits (271), Expect = 2e-21
 Identities = 49/76 (64%), Positives = 61/76 (80%)
 Frame = +3

Query: 480 YLISFTFDAIVDGSISIFYFAKEGANCTFSPLYPEIHKPVRIIFHEGLGQKFHQSSGTGL 659
           YL+SF FDA+ DGSI+I+YFAKE +NC FSPL+PE + PVRI F +G GQKF Q SGTG+
Sbjct: 132 YLVSFIFDALFDGSITIYYFAKEESNCRFSPLFPEAYMPVRIPFQKGPGQKFRQPSGTGI 191

Query: 660 DLGCLDMDDISKPYQG 707
           DLG  ++DD+SKP  G
Sbjct: 192 DLGFFELDDLSKPSPG 207


Top