BLASTX nr result

ID: Panax21_contig00016297 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00016297
         (501 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554306.1| PREDICTED: WD repeat-containing protein 70-l...    89   5e-16
ref|XP_004152006.1| PREDICTED: WD repeat-containing protein 70-l...    86   3e-15
ref|NP_001064792.1| Os10g0464100 [Oryza sativa Japonica Group] g...    86   3e-15
gb|AFW68646.1| nucleotide binding protein [Zea mays]                   86   3e-15
ref|XP_002464516.1| hypothetical protein SORBIDRAFT_01g019930 [S...    86   3e-15

>ref|XP_003554306.1| PREDICTED: WD repeat-containing protein 70-like [Glycine max]
          Length = 614

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 42/49 (85%), Positives = 44/49 (89%)
 Frame = +3

Query: 3   MNAHLESFRQLEPFEGHQVRSSCWSPTAYQFLCVTGSAQAKIYDGDGLT 149
           MNA LESFRQLEPFEGHQVR+  WSPTA +FLCVTGSAQAKIYD DGLT
Sbjct: 179 MNARLESFRQLEPFEGHQVRNLSWSPTADRFLCVTGSAQAKIYDRDGLT 227


>ref|XP_004152006.1| PREDICTED: WD repeat-containing protein 70-like [Cucumis sativus]
           gi|449509056|ref|XP_004163480.1| PREDICTED: WD
           repeat-containing protein 70-like [Cucumis sativus]
          Length = 646

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 39/49 (79%), Positives = 44/49 (89%)
 Frame = +3

Query: 3   MNAHLESFRQLEPFEGHQVRSSCWSPTAYQFLCVTGSAQAKIYDGDGLT 149
           MN+ L+SFRQLEPFEGHQ+R+  WSPTA +FLCVTGSAQAKIYD DGLT
Sbjct: 211 MNSRLQSFRQLEPFEGHQIRNLSWSPTADRFLCVTGSAQAKIYDRDGLT 259


>ref|NP_001064792.1| Os10g0464100 [Oryza sativa Japonica Group]
           gi|22758329|gb|AAN05533.1| putative WD domain containing
           protein [Oryza sativa Japonica Group]
           gi|31432560|gb|AAP54175.1| WD-40 repeat protein,
           putative, expressed [Oryza sativa Japonica Group]
           gi|78708792|gb|ABB47767.1| WD-40 repeat protein,
           putative, expressed [Oryza sativa Japonica Group]
           gi|78708793|gb|ABB47768.1| WD-40 repeat protein,
           putative, expressed [Oryza sativa Japonica Group]
           gi|113639401|dbj|BAF26706.1| Os10g0464100 [Oryza sativa
           Japonica Group]
          Length = 646

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 40/49 (81%), Positives = 44/49 (89%)
 Frame = +3

Query: 3   MNAHLESFRQLEPFEGHQVRSSCWSPTAYQFLCVTGSAQAKIYDGDGLT 149
           MN+ L+SFRQLEPFEGHQVRS  WSPT+ +FLCVTGSAQAKIYD DGLT
Sbjct: 210 MNSKLQSFRQLEPFEGHQVRSLSWSPTSDRFLCVTGSAQAKIYDRDGLT 258


>gb|AFW68646.1| nucleotide binding protein [Zea mays]
          Length = 622

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 40/49 (81%), Positives = 44/49 (89%)
 Frame = +3

Query: 3   MNAHLESFRQLEPFEGHQVRSSCWSPTAYQFLCVTGSAQAKIYDGDGLT 149
           MN+ L+SFRQLEPFEGHQVRS  WSPT+ +FLCVTGSAQAKIYD DGLT
Sbjct: 187 MNSKLQSFRQLEPFEGHQVRSLSWSPTSDRFLCVTGSAQAKIYDRDGLT 235


>ref|XP_002464516.1| hypothetical protein SORBIDRAFT_01g019930 [Sorghum bicolor]
           gi|241918370|gb|EER91514.1| hypothetical protein
           SORBIDRAFT_01g019930 [Sorghum bicolor]
          Length = 628

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 40/49 (81%), Positives = 44/49 (89%)
 Frame = +3

Query: 3   MNAHLESFRQLEPFEGHQVRSSCWSPTAYQFLCVTGSAQAKIYDGDGLT 149
           MN+ L+SFRQLEPFEGHQVRS  WSPT+ +FLCVTGSAQAKIYD DGLT
Sbjct: 193 MNSKLQSFRQLEPFEGHQVRSLSWSPTSDRFLCVTGSAQAKIYDRDGLT 241


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