BLASTX nr result

ID: Panax21_contig00016293 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00016293
         (600 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273695.1| PREDICTED: uncharacterized protein LOC100252...   132   5e-29
emb|CAN66102.1| hypothetical protein VITISV_041147 [Vitis vinifera]   132   5e-29
ref|XP_002308732.1| predicted protein [Populus trichocarpa] gi|2...   123   3e-26
ref|XP_002525247.1| conserved hypothetical protein [Ricinus comm...   120   2e-25
ref|XP_002329974.1| predicted protein [Populus trichocarpa] gi|2...   116   3e-24

>ref|XP_002273695.1| PREDICTED: uncharacterized protein LOC100252686 [Vitis vinifera]
          Length = 614

 Score =  132 bits (332), Expect = 5e-29
 Identities = 99/209 (47%), Positives = 118/209 (56%), Gaps = 35/209 (16%)
 Frame = +2

Query: 77  CSSKTFPNSPISQNIS----RTRSLNSDTRSSMPDTRLL-------LAEXXXXXXXXXXX 223
           CSS      PIS +      +TRS N + RSSMP+  +L       LAE           
Sbjct: 272 CSSIIQGIKPISSSSPVQNCKTRSHN-ELRSSMPEADMLPTMSTRLLAERNCGRGNVNGA 330

Query: 224 GDSHLNLKFSAC--SRSLNLPLSSSVKMMGES----------LSLP------------PP 331
             S    KFSA   SRSLNL  SSS + +  S          LS P            PP
Sbjct: 331 ESS----KFSASPFSRSLNLTPSSSDQSLFHSIKTSEKLASVLSKPHTNSMKNGSIYLPP 386

Query: 332 HPACTKPGPAADVARKGRKIFNHLEQVHSLRLLHNNYLQWRFANAKAEASLRAQTSDTER 511
            P CTKPG  A   RKGRK+  H E VHSL+LLHN+YLQWRFANAKAEA+++AQ  +TE+
Sbjct: 387 LPPCTKPGTDA---RKGRKVSGHQEDVHSLKLLHNHYLQWRFANAKAEATMQAQRRETEK 443

Query: 512 KLHSLGVKISDLCDAVERKRIELGLLQRS 598
            L+SLGVKISDL + V+ KRIELGLLQR+
Sbjct: 444 ALYSLGVKISDLYELVKGKRIELGLLQRT 472


>emb|CAN66102.1| hypothetical protein VITISV_041147 [Vitis vinifera]
          Length = 579

 Score =  132 bits (332), Expect = 5e-29
 Identities = 99/209 (47%), Positives = 118/209 (56%), Gaps = 35/209 (16%)
 Frame = +2

Query: 77  CSSKTFPNSPISQNIS----RTRSLNSDTRSSMPDTRLL-------LAEXXXXXXXXXXX 223
           CSS      PIS +      +TRS N + RSSMP+  +L       LAE           
Sbjct: 276 CSSIIQGIKPISSSSPVQNCKTRSHN-ELRSSMPEADMLPTMSTRLLAERNCGRGNVNGA 334

Query: 224 GDSHLNLKFSAC--SRSLNLPLSSSVKMMGES----------LSLP------------PP 331
             S    KFSA   SRSLNL  SSS + +  S          LS P            PP
Sbjct: 335 ESS----KFSASPFSRSLNLTPSSSDQSLFHSIKTSEKLASVLSKPHTNSMKNGSIYLPP 390

Query: 332 HPACTKPGPAADVARKGRKIFNHLEQVHSLRLLHNNYLQWRFANAKAEASLRAQTSDTER 511
            P CTKPG  A   RKGRK+  H E VHSL+LLHN+YLQWRFANAKAEA+++AQ  +TE+
Sbjct: 391 LPPCTKPGTDA---RKGRKVSGHQEDVHSLKLLHNHYLQWRFANAKAEATMQAQRRETEK 447

Query: 512 KLHSLGVKISDLCDAVERKRIELGLLQRS 598
            L+SLGVKISDL + V+ KRIELGLLQR+
Sbjct: 448 ALYSLGVKISDLYELVKGKRIELGLLQRT 476


>ref|XP_002308732.1| predicted protein [Populus trichocarpa] gi|222854708|gb|EEE92255.1|
           predicted protein [Populus trichocarpa]
          Length = 332

 Score =  123 bits (308), Expect = 3e-26
 Identities = 76/161 (47%), Positives = 103/161 (63%), Gaps = 7/161 (4%)
 Frame = +2

Query: 134 SLNSDTRSSMPDTRLLLAEXXXXXXXXXXXG--DSHLNLKFSACSRSLNLPLSSS----- 292
           ++N+D RSS+PD   LL +              +++ N   S CSRSLNL  S+S     
Sbjct: 36  NINNDVRSSLPD---LLGDTDTRFLAERNLNRLNNNNNPCASPCSRSLNLQRSTSSCDPS 92

Query: 293 VKMMGESLSLPPPHPACTKPGPAADVARKGRKIFNHLEQVHSLRLLHNNYLQWRFANAKA 472
           +    +S  LPP  P    P    D +RK +K+ +H E V SL+LLHN+YLQWRF NAKA
Sbjct: 93  LFHSLKSAKLPPVGPCSKIP---IDASRKTKKVSSHQEDVQSLKLLHNHYLQWRFVNAKA 149

Query: 473 EASLRAQTSDTERKLHSLGVKISDLCDAVERKRIELGLLQR 595
           +AS +AQTS+TER L+SLGVKI++L ++V+R R+ELGLLQR
Sbjct: 150 QASTQAQTSETERNLYSLGVKIAELYNSVKRIRVELGLLQR 190


>ref|XP_002525247.1| conserved hypothetical protein [Ricinus communis]
           gi|223535544|gb|EEF37213.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 504

 Score =  120 bits (301), Expect = 2e-25
 Identities = 81/170 (47%), Positives = 106/170 (62%), Gaps = 10/170 (5%)
 Frame = +2

Query: 116 NISRTRSLN--SDTRSSMPD--TRLLLAEXXXXXXXXXXXGDSHLNLKFSA--CSRSLNL 277
           +++R+ S+    D RSSMP+  +RLL+              DS    KFSA  CSRSL+ 
Sbjct: 186 HLARSSSIQILPDIRSSMPEASSRLLIDRNISNRK-----NDSS---KFSASPCSRSLDF 237

Query: 278 PLSSSVKMMGESLSLPPPHPACTK----PGPAADVARKGRKIFNHLEQVHSLRLLHNNYL 445
           PLS + +            PA  K    P P A V+RKGRK+ +H E V SLRLLHN+YL
Sbjct: 238 PLSDTCEHSLIHSFKTVDKPAIKKIAGLPLPPAHVSRKGRKVPSHQEDVQSLRLLHNHYL 297

Query: 446 QWRFANAKAEASLRAQTSDTERKLHSLGVKISDLCDAVERKRIELGLLQR 595
           QWR+ANAKAE  ++AQ  +TER L+SLG+KIS+L D+V++KRIE  LLQR
Sbjct: 298 QWRYANAKAEVCIKAQRRETERTLYSLGLKISELYDSVKQKRIEHSLLQR 347


>ref|XP_002329974.1| predicted protein [Populus trichocarpa] gi|222871996|gb|EEF09127.1|
           predicted protein [Populus trichocarpa]
          Length = 284

 Score =  116 bits (291), Expect = 3e-24
 Identities = 66/120 (55%), Positives = 82/120 (68%), Gaps = 5/120 (4%)
 Frame = +2

Query: 251 SACSRSLNLPLS-----SSVKMMGESLSLPPPHPACTKPGPAADVARKGRKIFNHLEQVH 415
           S CSRSLNL  S      S+    +S  LPP  P    P    D +RK RK+ +H E V 
Sbjct: 26  SPCSRSLNLQRSISSCDPSLFHSLKSTKLPPVAPCSKIPN---DASRKTRKVSSHQEDVQ 82

Query: 416 SLRLLHNNYLQWRFANAKAEASLRAQTSDTERKLHSLGVKISDLCDAVERKRIELGLLQR 595
           SL+LLHN+YLQWR+ NAKA+AS +AQ  +TER L+SLGVKI++L D+V+RKR ELGLLQR
Sbjct: 83  SLKLLHNHYLQWRYVNAKAQASAQAQRRETERNLYSLGVKITELYDSVKRKRAELGLLQR 142


Top