BLASTX nr result

ID: Panax21_contig00016291 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00016291
         (362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK34352.1| unknown [Medicago truncatula]                           63   2e-08
ref|XP_003602357.1| Splicing factor, arginine/serine-rich [Medic...    63   2e-08
ref|XP_003526755.1| PREDICTED: uncharacterized protein LOC100800...    59   5e-07
ref|XP_003526754.1| PREDICTED: uncharacterized protein LOC100799...    59   5e-07
gb|ACU19742.1| unknown [Glycine max]                                   59   5e-07

>gb|AFK34352.1| unknown [Medicago truncatula]
          Length = 376

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 47/125 (37%), Positives = 57/125 (45%), Gaps = 7/125 (5%)
 Frame = -3

Query: 360 NFHMVANNXXXXXXQKITTGHQTNSNGAAADQ-----MSLIQQHSHSINANGVALHQ--M 202
           N H V+++       K  T    N+N     Q      S        ++ANGV  HQ  +
Sbjct: 22  NNHAVSSDSTEVEKSKPRTDQDVNNNSVFNHQHQNGNYSFKTHQMGQMHANGVQNHQFVV 81

Query: 201 NXXXXXXXXXXXXXXXXXGLKQEMRDLEEMLSKLNPMAEEFVPPSLANYRPLLQHSATGA 22
           N                   K+EMRDLEE+LSKLNPMAEEFVPPSL N    L  +A  A
Sbjct: 82  NNDGYVMNGLRNGENGGESFKREMRDLEELLSKLNPMAEEFVPPSLTNNHGYL--AAGPA 139

Query: 21  PHFGY 7
             FGY
Sbjct: 140 AGFGY 144


>ref|XP_003602357.1| Splicing factor, arginine/serine-rich [Medicago truncatula]
           gi|355491405|gb|AES72608.1| Splicing factor,
           arginine/serine-rich [Medicago truncatula]
          Length = 384

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 47/125 (37%), Positives = 57/125 (45%), Gaps = 7/125 (5%)
 Frame = -3

Query: 360 NFHMVANNXXXXXXQKITTGHQTNSNGAAADQ-----MSLIQQHSHSINANGVALHQ--M 202
           N H V+++       K  T    N+N     Q      S        ++ANGV  HQ  +
Sbjct: 22  NNHAVSSDSTEVEKSKPRTDQDVNNNSVFNHQHQNGNYSFKTHQMGQMHANGVQNHQFVV 81

Query: 201 NXXXXXXXXXXXXXXXXXGLKQEMRDLEEMLSKLNPMAEEFVPPSLANYRPLLQHSATGA 22
           N                   K+EMRDLEE+LSKLNPMAEEFVPPSL N    L  +A  A
Sbjct: 82  NNDGYVMNGLRNGENGGESFKREMRDLEELLSKLNPMAEEFVPPSLTNNHGYL--AAGPA 139

Query: 21  PHFGY 7
             FGY
Sbjct: 140 AGFGY 144


>ref|XP_003526755.1| PREDICTED: uncharacterized protein LOC100800126 [Glycine max]
          Length = 369

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 31/45 (68%), Positives = 34/45 (75%)
 Frame = -3

Query: 141 KQEMRDLEEMLSKLNPMAEEFVPPSLANYRPLLQHSATGAPHFGY 7
           K++MRDLEE+LSKLNPMAEEFVPPSLAN   LL     G   FGY
Sbjct: 95  KRDMRDLEELLSKLNPMAEEFVPPSLANTHGLLAGPNAG---FGY 136


>ref|XP_003526754.1| PREDICTED: uncharacterized protein LOC100799585 [Glycine max]
          Length = 378

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 39/95 (41%), Positives = 50/95 (52%)
 Frame = -3

Query: 291 NSNGAAADQMSLIQQHSHSINANGVALHQMNXXXXXXXXXXXXXXXXXGLKQEMRDLEEM 112
           NSN     QM   Q H++ +N +G  ++ +                    K++MRDLEE+
Sbjct: 65  NSNYNYNAQMG--QMHANGVNNDGYGMNGV----------MSGENEGESFKRDMRDLEEL 112

Query: 111 LSKLNPMAEEFVPPSLANYRPLLQHSATGAPHFGY 7
           LSKLNPMAEEFVPPSL+N    L     GA  FGY
Sbjct: 113 LSKLNPMAEEFVPPSLSNTHGYLAGPGAGA-GFGY 146


>gb|ACU19742.1| unknown [Glycine max]
          Length = 179

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 31/45 (68%), Positives = 34/45 (75%)
 Frame = -3

Query: 141 KQEMRDLEEMLSKLNPMAEEFVPPSLANYRPLLQHSATGAPHFGY 7
           K++MRDLEE+LSKLNPMAEEFVPPSLAN   LL     G   FGY
Sbjct: 95  KRDMRDLEELLSKLNPMAEEFVPPSLANTHGLLAGPNAG---FGY 136


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