BLASTX nr result

ID: Panax21_contig00016272 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00016272
         (479 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN63553.1| hypothetical protein VITISV_003195 [Vitis vinifera]   168   4e-40
emb|CBI16896.3| unnamed protein product [Vitis vinifera]              166   1e-39
ref|XP_002278999.1| PREDICTED: pentatricopeptide repeat-containi...   166   1e-39
gb|ABD96873.1| hypothetical protein [Cleome spinosa]                  148   5e-34
ref|XP_002329308.1| predicted protein [Populus trichocarpa] gi|2...   146   1e-33

>emb|CAN63553.1| hypothetical protein VITISV_003195 [Vitis vinifera]
          Length = 650

 Score =  168 bits (426), Expect = 4e-40
 Identities = 88/157 (56%), Positives = 109/157 (69%)
 Frame = +3

Query: 9   RCFSSELAVEHKDSDQIAIITDVFSKPLNSSEAIKLELESNNVVISHDLVLSVLQNPNMA 188
           R FSS+LA+E K  D + + TD+FSKP    E IK E+ES+++V+SH+LVL VL+N    
Sbjct: 68  RSFSSDLALEDKGLDHV-VFTDIFSKPKGFDE-IKNEVESSDIVVSHELVLKVLENLESN 125

Query: 189 PEVARRLFNWISEVEIERLSSKSYNFMLGILGANGFVKEFWDLVGVMKKKGFXXXXXXXX 368
           PEVAR +F+W+   E ERLSSKSYN MLGILG+NGFV EFWDLV VMKKKG+        
Sbjct: 126 PEVARXVFDWVLRAESERLSSKSYNLMLGILGSNGFVSEFWDLVEVMKKKGYGVSKAAYV 185

Query: 369 XXSEKFENEGRTGDLQKLKELYLSGSTDNSVDKYCSR 479
              E FE E    DL+KL+ L+ SGS DNS+ K CSR
Sbjct: 186 KALENFEKEALGSDLEKLRGLFASGSVDNSIQKICSR 222



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 31/115 (26%), Positives = 52/115 (45%)
 Frame = +3

Query: 117 ELESNNVVISHDLVLSVLQNPNMAPEVARRLFNWISEVEIERLSSKSYNFMLGILGANGF 296
           +L +  V  S DLV  VL+N  + P  A   F W+ E ++ +    +YN ML +LG    
Sbjct: 239 QLHNLKVTFSGDLVAMVLENLGLEPMKALIFFRWVEESDLXKHDKXTYNAMLRVLGREDC 298

Query: 297 VKEFWDLVGVMKKKGFXXXXXXXXXXSEKFENEGRTGDLQKLKELYLSGSTDNSV 461
           ++ FW +   M+  G+            +F       ++  L E  +SG+   S+
Sbjct: 299 IERFWKVADEMRNAGYEMEVATYXKVVGRFYKRKMIXEVVDLYEFAMSGANKPSM 353


>emb|CBI16896.3| unnamed protein product [Vitis vinifera]
          Length = 472

 Score =  166 bits (421), Expect = 1e-39
 Identities = 87/157 (55%), Positives = 109/157 (69%)
 Frame = +3

Query: 9   RCFSSELAVEHKDSDQIAIITDVFSKPLNSSEAIKLELESNNVVISHDLVLSVLQNPNMA 188
           R FSS+LA+E K  D + + TD+FSKP    E IK E+ES+++V+SH+LVL VL+N    
Sbjct: 68  RSFSSDLALEDKGLDHV-VFTDIFSKPKGFDE-IKNEVESSDIVVSHELVLKVLENLESN 125

Query: 189 PEVARRLFNWISEVEIERLSSKSYNFMLGILGANGFVKEFWDLVGVMKKKGFXXXXXXXX 368
           PEVAR +F+W+   E ERLSSKSYN MLGILG+NGFV EFWDLV VMKKKG+        
Sbjct: 126 PEVARSVFDWVLRAESERLSSKSYNLMLGILGSNGFVSEFWDLVEVMKKKGYGVSKAAYV 185

Query: 369 XXSEKFENEGRTGDLQKLKELYLSGSTDNSVDKYCSR 479
              E FE E    DL+KL+ L+ SGS D+S+ K CSR
Sbjct: 186 KALENFEKEALGSDLEKLRGLFASGSVDDSIQKICSR 222



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 36/140 (25%), Positives = 62/140 (44%), Gaps = 3/140 (2%)
 Frame = +3

Query: 51  DQIAIITDVFSKPLNSS---EAIKLELESNNVVISHDLVLSVLQNPNMAPEVARRLFNWI 221
           D I  I    SK + S    + ++ +L +  V  S DLV  VL+N  + P  A   F W+
Sbjct: 214 DSIQKICSRVSKIIRSEVWGDNVEGQLHNLKVTFSGDLVAMVLENLGLEPMKALIFFRWV 273

Query: 222 SEVEIERLSSKSYNFMLGILGANGFVKEFWDLVGVMKKKGFXXXXXXXXXXSEKFENEGR 401
            E ++ +   ++YN ML +LG    ++ FW +   M+  G+            +F     
Sbjct: 274 EESDLVKHDKQTYNAMLRVLGREDCIERFWKVADEMRNAGYEMEVATYFKVVGRFYKRKM 333

Query: 402 TGDLQKLKELYLSGSTDNSV 461
             ++  L E  +SG+   S+
Sbjct: 334 IKEVVDLYEFAMSGANKPSM 353


>ref|XP_002278999.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02490,
           mitochondrial-like [Vitis vinifera]
          Length = 650

 Score =  166 bits (421), Expect = 1e-39
 Identities = 87/157 (55%), Positives = 109/157 (69%)
 Frame = +3

Query: 9   RCFSSELAVEHKDSDQIAIITDVFSKPLNSSEAIKLELESNNVVISHDLVLSVLQNPNMA 188
           R FSS+LA+E K  D + + TD+FSKP    E IK E+ES+++V+SH+LVL VL+N    
Sbjct: 68  RSFSSDLALEDKGLDHV-VFTDIFSKPKGFDE-IKNEVESSDIVVSHELVLKVLENLESN 125

Query: 189 PEVARRLFNWISEVEIERLSSKSYNFMLGILGANGFVKEFWDLVGVMKKKGFXXXXXXXX 368
           PEVAR +F+W+   E ERLSSKSYN MLGILG+NGFV EFWDLV VMKKKG+        
Sbjct: 126 PEVARSVFDWVLRAESERLSSKSYNLMLGILGSNGFVSEFWDLVEVMKKKGYGVSKAAYV 185

Query: 369 XXSEKFENEGRTGDLQKLKELYLSGSTDNSVDKYCSR 479
              E FE E    DL+KL+ L+ SGS D+S+ K CSR
Sbjct: 186 KALENFEKEALGSDLEKLRGLFASGSVDDSIQKICSR 222



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 36/140 (25%), Positives = 62/140 (44%), Gaps = 3/140 (2%)
 Frame = +3

Query: 51  DQIAIITDVFSKPLNSS---EAIKLELESNNVVISHDLVLSVLQNPNMAPEVARRLFNWI 221
           D I  I    SK + S    + ++ +L +  V  S DLV  VL+N  + P  A   F W+
Sbjct: 214 DSIQKICSRVSKIIRSEVWGDNVEGQLHNLKVTFSGDLVAMVLENLGLEPMKALIFFRWV 273

Query: 222 SEVEIERLSSKSYNFMLGILGANGFVKEFWDLVGVMKKKGFXXXXXXXXXXSEKFENEGR 401
            E ++ +   ++YN ML +LG    ++ FW +   M+  G+            +F     
Sbjct: 274 EESDLVKHDKQTYNAMLRVLGREDCIERFWKVADEMRNAGYEMEVATYFKVVGRFYKRKM 333

Query: 402 TGDLQKLKELYLSGSTDNSV 461
             ++  L E  +SG+   S+
Sbjct: 334 IKEVVDLYEFAMSGANKPSM 353


>gb|ABD96873.1| hypothetical protein [Cleome spinosa]
          Length = 666

 Score =  148 bits (373), Expect = 5e-34
 Identities = 78/157 (49%), Positives = 103/157 (65%)
 Frame = +3

Query: 9   RCFSSELAVEHKDSDQIAIITDVFSKPLNSSEAIKLELESNNVVISHDLVLSVLQNPNMA 188
           R FSSE A++ K SD + +I DVFS+ L+  + IK  L+ + +VI+HDL L VL+     
Sbjct: 75  RNFSSEPAIDVKPSDDVTVI-DVFSR-LSDKDEIKKLLDLSGIVINHDLGLKVLRGLQSR 132

Query: 189 PEVARRLFNWISEVEIERLSSKSYNFMLGILGANGFVKEFWDLVGVMKKKGFXXXXXXXX 368
           P+ A+R F W++E +  +LSSKSYN ML ILG NGFV EFW LV  MKKKG+        
Sbjct: 133 PDAAKRFFQWVTEADAAKLSSKSYNMMLRILGVNGFVDEFWGLVVDMKKKGYGVSANVRD 192

Query: 369 XXSEKFENEGRTGDLQKLKELYLSGSTDNSVDKYCSR 479
              EKF+ +G  GDL++LKEL+ SGS DNS +K C R
Sbjct: 193 KVGEKFQKDGLQGDLERLKELFASGSMDNSAEKVCHR 229


>ref|XP_002329308.1| predicted protein [Populus trichocarpa] gi|222870762|gb|EEF07893.1|
           predicted protein [Populus trichocarpa]
          Length = 658

 Score =  146 bits (369), Expect = 1e-33
 Identities = 79/155 (50%), Positives = 105/155 (67%), Gaps = 2/155 (1%)
 Frame = +3

Query: 9   RCFSSELAVEH--KDSDQIAIITDVFSKPLNSSEAIKLELESNNVVISHDLVLSVLQNPN 182
           R  SSE ++    KD D + ++ DVF+K  + S+ I  ELE ++VVISHDLVL VL++  
Sbjct: 69  RNLSSEASLVEPTKDPDLVLLVCDVFTK-FDDSDDINKELELSSVVISHDLVLKVLKSLG 127

Query: 183 MAPEVARRLFNWISEVEIERLSSKSYNFMLGILGANGFVKEFWDLVGVMKKKGFXXXXXX 362
             P VA+R F+W+ + + ERLSSKSYN+MLGILG NG V EFW+LV  MK KG+      
Sbjct: 128 SKPGVAKRFFDWVLKKDSERLSSKSYNWMLGILGVNGLVAEFWELVDKMKTKGYGVSGVT 187

Query: 363 XXXXSEKFENEGRTGDLQKLKELYLSGSTDNSVDK 467
                EKFENEG  GD++KLK ++ +GS DNSV+K
Sbjct: 188 RDRVLEKFENEGLKGDIEKLKGVFATGSIDNSVEK 222


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