BLASTX nr result

ID: Panax21_contig00016262 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00016262
         (567 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003601625.1| DEAD-box ATP-dependent RNA helicase [Medicag...   206   3e-51
ref|NP_001068221.1| Os11g0599500 [Oryza sativa Japonica Group] g...   205   5e-51
ref|XP_002281113.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   205   5e-51
gb|EAZ18899.1| hypothetical protein OsJ_34439 [Oryza sativa Japo...   205   5e-51
ref|XP_003524948.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   204   6e-51

>ref|XP_003601625.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
           gi|355490673|gb|AES71876.1| DEAD-box ATP-dependent RNA
           helicase [Medicago truncatula]
          Length = 613

 Score =  206 bits (523), Expect = 3e-51
 Identities = 100/109 (91%), Positives = 106/109 (97%)
 Frame = -2

Query: 332 EREQALRSFKSGHTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKS 153
           ERE ALRSFKSG+TPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGK 
Sbjct: 442 EREAALRSFKSGNTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKK 501

Query: 152 GLATAFFNENNSSMARSLSELMQEANQEVPAWLARFAARASYGGGKNRR 6
           GLATAFFNENN+SMARSL +LMQEANQEVPAWL+RFAAR+S+GGGKNRR
Sbjct: 502 GLATAFFNENNTSMARSLQDLMQEANQEVPAWLSRFAARSSFGGGKNRR 550


>ref|NP_001068221.1| Os11g0599500 [Oryza sativa Japonica Group]
           gi|122206897|sp|Q2R1M8.1|RH52C_ORYSJ RecName:
           Full=DEAD-box ATP-dependent RNA helicase 52C
           gi|77551918|gb|ABA94715.1| DEAD-box protein 3,
           X-chromosomal, putative, expressed [Oryza sativa
           Japonica Group] gi|113645443|dbj|BAF28584.1|
           Os11g0599500 [Oryza sativa Japonica Group]
          Length = 623

 Score =  205 bits (521), Expect = 5e-51
 Identities = 102/111 (91%), Positives = 107/111 (96%), Gaps = 2/111 (1%)
 Frame = -2

Query: 332 EREQALRSFKSGHTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKS 153
           ERE ALRSFKSGHTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKS
Sbjct: 454 EREYALRSFKSGHTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKS 513

Query: 152 GLATAFFNENNSSMARSLSELMQEANQEVPAWLARFAARASY--GGGKNRR 6
           GLATAFFNENNSSMARSL+ELMQE+NQEVPAWL+R+AAR SY  GGG+NRR
Sbjct: 514 GLATAFFNENNSSMARSLAELMQESNQEVPAWLSRYAARPSYGGGGGRNRR 564


>ref|XP_002281113.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 37-like [Vitis
           vinifera]
          Length = 622

 Score =  205 bits (521), Expect = 5e-51
 Identities = 99/109 (90%), Positives = 106/109 (97%)
 Frame = -2

Query: 332 EREQALRSFKSGHTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKS 153
           ERE ALRSFKSG+TPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGK+
Sbjct: 460 EREHALRSFKSGNTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKT 519

Query: 152 GLATAFFNENNSSMARSLSELMQEANQEVPAWLARFAARASYGGGKNRR 6
           GLATAFFNENNSS+AR L++LMQEANQEVPAWL R+A+RASYGGGKNRR
Sbjct: 520 GLATAFFNENNSSLARPLADLMQEANQEVPAWLTRYASRASYGGGKNRR 568


>gb|EAZ18899.1| hypothetical protein OsJ_34439 [Oryza sativa Japonica Group]
          Length = 541

 Score =  205 bits (521), Expect = 5e-51
 Identities = 102/111 (91%), Positives = 107/111 (96%), Gaps = 2/111 (1%)
 Frame = -2

Query: 332 EREQALRSFKSGHTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKS 153
           ERE ALRSFKSGHTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKS
Sbjct: 372 EREYALRSFKSGHTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKS 431

Query: 152 GLATAFFNENNSSMARSLSELMQEANQEVPAWLARFAARASY--GGGKNRR 6
           GLATAFFNENNSSMARSL+ELMQE+NQEVPAWL+R+AAR SY  GGG+NRR
Sbjct: 432 GLATAFFNENNSSMARSLAELMQESNQEVPAWLSRYAARPSYGGGGGRNRR 482


>ref|XP_003524948.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 37-like [Glycine
           max]
          Length = 614

 Score =  204 bits (520), Expect = 6e-51
 Identities = 99/109 (90%), Positives = 107/109 (98%)
 Frame = -2

Query: 332 EREQALRSFKSGHTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKS 153
           ERE ALRSFKSG+TPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGK 
Sbjct: 452 ERELALRSFKSGNTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKK 511

Query: 152 GLATAFFNENNSSMARSLSELMQEANQEVPAWLARFAARASYGGGKNRR 6
           GLATAFFN+NNSS+AR+LSELMQEANQEVPAWL+RFAAR+S+GGG+NRR
Sbjct: 512 GLATAFFNDNNSSLARALSELMQEANQEVPAWLSRFAARSSFGGGRNRR 560


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