BLASTX nr result

ID: Panax21_contig00016253 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00016253
         (1055 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635535.1| PREDICTED: uncharacterized protein LOC100854...   370   e-100
ref|XP_002265978.2| PREDICTED: snRNA-activating protein complex ...   369   e-100
ref|XP_002322466.1| predicted protein [Populus trichocarpa] gi|2...   338   2e-90
ref|XP_003529686.1| PREDICTED: snRNA-activating protein complex ...   326   7e-87
gb|AFK34824.1| unknown [Medicago truncatula]                          300   4e-79

>ref|XP_003635535.1| PREDICTED: uncharacterized protein LOC100854109 [Vitis vinifera]
          Length = 443

 Score =  370 bits (949), Expect = e-100
 Identities = 188/324 (58%), Positives = 226/324 (69%), Gaps = 1/324 (0%)
 Frame = +2

Query: 2    YIAKVEQLVRIRQKRDEDKAAAKLHSFNGSCRINESATISSEKTERITSLRTNTSTRKVR 181
            Y AKV+QL  I+ K+DEDKAAA+LHSF+GSC+INE A  SSEK ERI  LR+ +S  KV+
Sbjct: 131  YTAKVQQLAEIKHKQDEDKAAARLHSFDGSCKINECALPSSEKIERIKYLRSISSVTKVK 190

Query: 182  TPSAHDHVQELYPEKEIILCVEVYHSRNTWAKTQEFLVLGRQPLSELRDKIYCLTDQVME 361
            + + H HV E Y  ++ +LC+E+YHSR TW K QEFLVLGRQ L+ELRD I C TDQVM+
Sbjct: 191  SSNIHGHVMEHY--EDAVLCIEIYHSRRTWVKAQEFLVLGRQTLTELRDNICCATDQVMQ 248

Query: 362  KAGQHDPSGYFLIEDVFCNDLREASAIDYSKPILDWLRDSKKEALEKWEEIVSGKLQLKQ 541
            KAG+H+PSGY LIEDVFCNDLR+ SAIDYSKPI DWLR+SK +ALEKWE I+SG+LQ KQ
Sbjct: 249  KAGKHNPSGYILIEDVFCNDLRDPSAIDYSKPIFDWLRNSKDDALEKWECIISGELQQKQ 308

Query: 542  KALVASKTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKHVIVIR 721
            KAL+   T                                             +H IVIR
Sbjct: 309  KALLGDPT---------ISRLPHFKAVDMHKTRFCDLQFRLGAGYLYCHQGDCRHTIVIR 359

Query: 722  DMRLIHPEDAQNRFAYPVQTFQLKTRPRKCSVCQIFRAEKVTVDDKWAGENPCYFCGLCY 901
            DMRL HPED  +R AYP+ TFQLK+R +KC VC+I+RA KVTVDDKWA ENPCYFC  CY
Sbjct: 360  DMRLFHPEDVGDRAAYPILTFQLKSRVQKCCVCKIYRATKVTVDDKWAPENPCYFCDNCY 419

Query: 902  YMLHY-VNGSLLYDDFSVYDYYPE 970
            ++LHY  +GSLLY +FSVYDY+ E
Sbjct: 420  FLLHYSEDGSLLYKEFSVYDYHHE 443


>ref|XP_002265978.2| PREDICTED: snRNA-activating protein complex subunit 3-like, partial
           [Vitis vinifera]
          Length = 315

 Score =  369 bits (947), Expect = e-100
 Identities = 188/324 (58%), Positives = 225/324 (69%), Gaps = 1/324 (0%)
 Frame = +2

Query: 2   YIAKVEQLVRIRQKRDEDKAAAKLHSFNGSCRINESATISSEKTERITSLRTNTSTRKVR 181
           Y AKV+QL  I+ K+DEDKAAA+LHSF+GSC+INE A  SSEK ERI  LR+ +S  KV+
Sbjct: 3   YTAKVQQLAEIKHKQDEDKAAARLHSFDGSCKINECALPSSEKIERIKYLRSISSVTKVK 62

Query: 182 TPSAHDHVQELYPEKEIILCVEVYHSRNTWAKTQEFLVLGRQPLSELRDKIYCLTDQVME 361
           + + H HV E Y  ++ +LC+E+YHSR TW K QEFLVLGRQ L+ELRD I C TDQVM+
Sbjct: 63  SSNIHGHVMEHY--EDAVLCIEIYHSRRTWVKAQEFLVLGRQTLTELRDNICCATDQVMQ 120

Query: 362 KAGQHDPSGYFLIEDVFCNDLREASAIDYSKPILDWLRDSKKEALEKWEEIVSGKLQLKQ 541
           KAG+H+PSGY LIEDVFCNDLR+ SAIDYSKPI DWLR+SK +ALEKWE I+SG LQ KQ
Sbjct: 121 KAGKHNPSGYILIEDVFCNDLRDPSAIDYSKPIFDWLRNSKDDALEKWECIISGDLQQKQ 180

Query: 542 KALVASKTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKHVIVIR 721
           KAL+   T                                             +H IVIR
Sbjct: 181 KALLGDPT---------ISHLPHFKAVDMHKTRFCDLQFRLGAGYLYCHQGDCRHTIVIR 231

Query: 722 DMRLIHPEDAQNRFAYPVQTFQLKTRPRKCSVCQIFRAEKVTVDDKWAGENPCYFCGLCY 901
           DMRL HPED  +R AYP+ TFQLK+R +KC VC+I+RA KVTVDDKWA ENPCYFC  CY
Sbjct: 232 DMRLFHPEDVGDRAAYPILTFQLKSRVQKCCVCKIYRATKVTVDDKWAPENPCYFCDNCY 291

Query: 902 YMLHY-VNGSLLYDDFSVYDYYPE 970
           ++LHY  +GSLLY +FSVYDY+ E
Sbjct: 292 FLLHYSEDGSLLYKEFSVYDYHHE 315


>ref|XP_002322466.1| predicted protein [Populus trichocarpa] gi|222869462|gb|EEF06593.1|
           predicted protein [Populus trichocarpa]
          Length = 314

 Score =  338 bits (866), Expect = 2e-90
 Identities = 166/321 (51%), Positives = 212/321 (66%), Gaps = 1/321 (0%)
 Frame = +2

Query: 2   YIAKVEQLVRIRQKRDEDKAAAKLHSFNGSCRINESATISSEKTERITSLRTNTSTRKVR 181
           Y+ KV+ LV+I+QK+D+DKA  +LHSFN  C+IN S   S  +T  + SLR+    +K +
Sbjct: 4   YLMKVDDLVKIKQKQDQDKAMTRLHSFN--CKINYSGITSLNRTNTMQSLRSTNFGKKPK 61

Query: 182 TPSAHDHVQELYPEKEIILCVEVYHSRNTWAKTQEFLVLGRQPLSELRDKIYCLTDQVME 361
           +    +H+  + PE  +++CVE+YH    W KTQEFLVLG Q L+E+RDKIYCLTDQ+M+
Sbjct: 62  SSDLQEHIAVMLPE--VVICVEIYHCIRKWFKTQEFLVLGGQTLTEMRDKIYCLTDQMMQ 119

Query: 362 KAGQHDPSGYFLIEDVFCNDLREASAIDYSKPILDWLRDSKKEALEKWEEIVSGKLQLKQ 541
           KAGQHDPSGYFL+EDVFCNDLR+ SAIDYS+PI+DWLR+ K +A  KWE I+SG LQ KQ
Sbjct: 120 KAGQHDPSGYFLVEDVFCNDLRDTSAIDYSEPIIDWLRNKKADAFRKWECIISGDLQQKQ 179

Query: 542 KALVASKTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKHVIVIR 721
           KA++   T                                             KH I+ R
Sbjct: 180 KAVLGEST---------TPCLPQFRRRDMQNTRFCDLRFRLGAGYLYCHQGDCKHTIIFR 230

Query: 722 DMRLIHPEDAQNRFAYPVQTFQLKTRPRKCSVCQIFRAEKVTVDDKWAGENPCYFCGLCY 901
           DMRLIHP+D QNR AYP+ +FQ+K R +KC VC+++RA KVTVDDKWA +NPCYFC  CY
Sbjct: 231 DMRLIHPDDLQNRVAYPIVSFQIKFRTQKCMVCKVYRAVKVTVDDKWAPDNPCYFCNDCY 290

Query: 902 YMLHY-VNGSLLYDDFSVYDY 961
           Y+LH+  NGSLLY  FS YDY
Sbjct: 291 YLLHHSENGSLLYSGFSAYDY 311


>ref|XP_003529686.1| PREDICTED: snRNA-activating protein complex subunit 3-like [Glycine
            max]
          Length = 435

 Score =  326 bits (835), Expect = 7e-87
 Identities = 175/320 (54%), Positives = 213/320 (66%), Gaps = 1/320 (0%)
 Frame = +2

Query: 5    IAKVEQLVRIRQKRDEDKAAAKLHSFNGSCRINESATISSEKTERITSLRTNTSTRKVRT 184
            I KVEQ+VRI+QK++EDKA+ KLHSF+   RINE A   S +TER+ +LR+ +STRKV T
Sbjct: 127  IEKVEQVVRIKQKQEEDKASVKLHSFDR--RINE-AVHKSTRTERMRTLRSTSSTRKVNT 183

Query: 185  PSAHDHVQELYPEKEIILCVEVYHSRNTWAKTQEFLVLGRQPLSELRDKIYCLTDQVMEK 364
             S  +H+  LYPE  ++L VEVYH+     K QE LVLG Q L+ LRDKI+C TDQVM K
Sbjct: 184  ASLQEHLPVLYPE--VVLSVEVYHNVRKGTKIQELLVLGGQTLTALRDKIFCSTDQVMHK 241

Query: 365  AGQHDPSGYFLIEDVFCNDLREASAIDYSKPILDWLRDSKKEALEKWEEIVSGKLQLKQK 544
            AGQHDPSGYFLIEDVFC DLR+ SAID ++PILDWLRDSK+EA +KWE I++G+LQ KQK
Sbjct: 242  AGQHDPSGYFLIEDVFCPDLRDPSAIDLTRPILDWLRDSKEEAQKKWEYIITGELQKKQK 301

Query: 545  ALVASKTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKHVIVIRD 724
            A++  K+                                              H +VIRD
Sbjct: 302  AIMGEKS---------ASQLPHFRSIEMHKIRFCDLSFQLGAGYLYCHQGDCTHTLVIRD 352

Query: 725  MRLIHPEDAQNRFAYPVQTFQLKTRPRKCSVCQIFRAEKVTVDDKWAGENPCYFCGLCYY 904
            MRLIHPED  NR  YP+ TFQLK R +KC+VC+IFRA KVTVDDKW  ENPCYFC  C+ 
Sbjct: 353  MRLIHPEDVHNRAVYPIITFQLKLRFQKCNVCKIFRATKVTVDDKWTPENPCYFCDECFS 412

Query: 905  MLHYV-NGSLLYDDFSVYDY 961
            +LH   +G+LLY DF  YDY
Sbjct: 413  LLHQADDGTLLYTDFVEYDY 432


>gb|AFK34824.1| unknown [Medicago truncatula]
          Length = 447

 Score =  300 bits (768), Expect = 4e-79
 Identities = 163/326 (50%), Positives = 205/326 (62%), Gaps = 9/326 (2%)
 Frame = +2

Query: 11   KVEQLVRIRQKRDEDKAAAKLHSFNGSCRINESATISSEKTERITSLRTNTSTRKVRTPS 190
            KVE++VRI+QK++EDKA  +LHSF+  CRIN+SA   S KT+R+ SLR+ +S RKV T  
Sbjct: 131  KVEEVVRIKQKQEEDKAQVRLHSFHPDCRINQSAN-KSIKTQRMMSLRSTSSARKVNTLG 189

Query: 191  AHDHVQELYPEKEIILCVEVYHS-------RNTWAKTQEFLVLGRQPLSELRDKIYCLTD 349
              +H+     + E++L VE++H+        N   KTQE LVLG Q LS LRDKI C TD
Sbjct: 190  LQEHIP--VQDSEVVLSVEIFHNFRKGVKLSNAKKKTQELLVLGGQNLSVLRDKINCSTD 247

Query: 350  QVMEKAGQHDPSGYFLIEDVFCNDLREASAIDYSKPILDWLRDSKKEALEKWEEIVSGKL 529
            QVM+KAGQHDPSGYFLIEDVF  DLR+ SAID ++PILDWL++SK+EA +KWE I++G+L
Sbjct: 248  QVMQKAGQHDPSGYFLIEDVFYTDLRDPSAIDLTRPILDWLQNSKEEAQKKWEYIINGEL 307

Query: 530  QLKQKALVASKTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKHV 709
            Q KQKA+V   +                                              H 
Sbjct: 308  QQKQKAIVGEAS---------VSHLPRFASFEMHKIHFCDLGFRLGAGYLYCHQGDCTHT 358

Query: 710  IVIRDMRLIHPEDAQNRFAYPVQTFQLKTRPRKCSVCQIFRAEKVTVDDKWAGENPCYFC 889
            +VIRDMRLIH +D QN   YP+ TFQLK R +KC VC+IFRA KVTVDDKW  +NPCYFC
Sbjct: 359  LVIRDMRLIHADDVQNWAVYPIVTFQLKIRFQKCGVCKIFRATKVTVDDKWTPDNPCYFC 418

Query: 890  GLCYYMLHYV--NGSLLYDDFSVYDY 961
              C+ +LH     GS +Y DF  YDY
Sbjct: 419  DECFSLLHLAEDGGSPMYTDFIEYDY 444


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