BLASTX nr result

ID: Panax21_contig00016241 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00016241
         (1089 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315052.1| predicted protein [Populus trichocarpa] gi|2...   108   3e-21
ref|XP_002312245.1| predicted protein [Populus trichocarpa] gi|2...   107   7e-21
ref|XP_002522435.1| membrane associated ring finger 1,8, putativ...   103   7e-20
emb|CBI31954.3| unnamed protein product [Vitis vinifera]               99   2e-18
ref|XP_002273832.1| PREDICTED: uncharacterized protein LOC100256...    99   2e-18

>ref|XP_002315052.1| predicted protein [Populus trichocarpa] gi|222864092|gb|EEF01223.1|
           predicted protein [Populus trichocarpa]
          Length = 280

 Score =  108 bits (269), Expect = 3e-21
 Identities = 59/94 (62%), Positives = 62/94 (65%)
 Frame = +1

Query: 496 LMALLLFWHALTVPESDGEDNGSTFFTLFLLRATGFLLPCYIMARAFSILHRRRXXXXXX 675
           LMALLL  HALT  +SDGED+ S FF+LFLLRA GFLLPCYIMA A SIL RRR      
Sbjct: 185 LMALLLLRHALTATDSDGEDDVSAFFSLFLLRAAGFLLPCYIMAWAISILQRRRQRQEAA 244

Query: 676 XXXXXXXXXXXXSGQTRGLQFTIASAPTVTPQQE 777
                       SGQ RGLQFTIA  PTVTP QE
Sbjct: 245 ALAATQVAFVLQSGQQRGLQFTIAPGPTVTPHQE 278


>ref|XP_002312245.1| predicted protein [Populus trichocarpa] gi|222852065|gb|EEE89612.1|
           predicted protein [Populus trichocarpa]
          Length = 280

 Score =  107 bits (266), Expect = 7e-21
 Identities = 58/94 (61%), Positives = 63/94 (67%)
 Frame = +1

Query: 496 LMALLLFWHALTVPESDGEDNGSTFFTLFLLRATGFLLPCYIMARAFSILHRRRXXXXXX 675
           LMALLL  HALT+ +SD +D+ STFF+LFLLRA GFLLPCYIMA A SIL RRR      
Sbjct: 185 LMALLLLRHALTLTDSDADDDVSTFFSLFLLRAAGFLLPCYIMAWAISILQRRRQRQEAA 244

Query: 676 XXXXXXXXXXXXSGQTRGLQFTIASAPTVTPQQE 777
                       SGQ RGLQFTIA  PTVTP QE
Sbjct: 245 ALAATQVAFVLQSGQQRGLQFTIAPGPTVTPHQE 278


>ref|XP_002522435.1| membrane associated ring finger 1,8, putative [Ricinus communis]
           gi|223538320|gb|EEF39927.1| membrane associated ring
           finger 1,8, putative [Ricinus communis]
          Length = 283

 Score =  103 bits (257), Expect = 7e-20
 Identities = 57/94 (60%), Positives = 62/94 (65%)
 Frame = +1

Query: 496 LMALLLFWHALTVPESDGEDNGSTFFTLFLLRATGFLLPCYIMARAFSILHRRRXXXXXX 675
           LMALLL  HALTV ++DG+D+ STFF+LFLLRA GFLLPCYIMA A SIL RRR      
Sbjct: 188 LMALLLLRHALTVTDADGDDDVSTFFSLFLLRAAGFLLPCYIMAWAISILQRRRQRQEAA 247

Query: 676 XXXXXXXXXXXXSGQTRGLQFTIASAPTVTPQQE 777
                       SGQ RGL FTIAS P VT  QE
Sbjct: 248 ALAATQVAFVLQSGQHRGLHFTIASGPQVTAHQE 281


>emb|CBI31954.3| unnamed protein product [Vitis vinifera]
          Length = 591

 Score = 98.6 bits (244), Expect = 2e-18
 Identities = 56/98 (57%), Positives = 63/98 (64%), Gaps = 2/98 (2%)
 Frame = +1

Query: 496 LMALLLFWHALTVPESD--GEDNGSTFFTLFLLRATGFLLPCYIMARAFSILHRRRXXXX 669
           LMALLL  HALT+ ++D  G+D+ STFF+LFLLRA GFLLPCYIMA A SIL RRR    
Sbjct: 494 LMALLLLRHALTITDADTDGDDDTSTFFSLFLLRAAGFLLPCYIMAWAISILQRRRQRQE 553

Query: 670 XXXXXXXXXXXXXXSGQTRGLQFTIASAPTVTPQQEHA 783
                         SGQ RGLQFT+A A  V P QE A
Sbjct: 554 AAALAATQVAFVLQSGQRRGLQFTVAPAHVVAPPQEPA 591


>ref|XP_002273832.1| PREDICTED: uncharacterized protein LOC100256824 [Vitis vinifera]
           gi|147785386|emb|CAN70908.1| hypothetical protein
           VITISV_040117 [Vitis vinifera]
          Length = 279

 Score = 98.6 bits (244), Expect = 2e-18
 Identities = 56/98 (57%), Positives = 63/98 (64%), Gaps = 2/98 (2%)
 Frame = +1

Query: 496 LMALLLFWHALTVPESD--GEDNGSTFFTLFLLRATGFLLPCYIMARAFSILHRRRXXXX 669
           LMALLL  HALT+ ++D  G+D+ STFF+LFLLRA GFLLPCYIMA A SIL RRR    
Sbjct: 182 LMALLLLRHALTITDADTDGDDDTSTFFSLFLLRAAGFLLPCYIMAWAISILQRRRQRQE 241

Query: 670 XXXXXXXXXXXXXXSGQTRGLQFTIASAPTVTPQQEHA 783
                         SGQ RGLQFT+A A  V P QE A
Sbjct: 242 AAALAATQVAFVLQSGQRRGLQFTVAPAHVVAPPQEPA 279


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