BLASTX nr result

ID: Panax21_contig00016240 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00016240
         (362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312245.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-12
ref|XP_002315052.1| predicted protein [Populus trichocarpa] gi|2...    75   5e-12
ref|XP_003556812.1| PREDICTED: uncharacterized protein LOC100817...    75   7e-12
ref|XP_002522435.1| membrane associated ring finger 1,8, putativ...    74   9e-12
emb|CBI31954.3| unnamed protein product [Vitis vinifera]               74   1e-11

>ref|XP_002312245.1| predicted protein [Populus trichocarpa] gi|222852065|gb|EEE89612.1|
           predicted protein [Populus trichocarpa]
          Length = 280

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 44/73 (60%), Positives = 45/73 (61%)
 Frame = +1

Query: 1   STFFTLFLLRATGFLLPCYIMAWAISIXXXXXXXXXXXXXXXXXXXXVLQSRQTGGLQFT 180
           STFF+LFLLRA GFLLPCYIMAWAISI                    VLQS Q  GLQFT
Sbjct: 207 STFFSLFLLRAAGFLLPCYIMAWAISILQRRRQRQEAAALAATQVAFVLQSGQQRGLQFT 266

Query: 181 IASAPTVTTPQQE 219
           IA  PTV TP QE
Sbjct: 267 IAPGPTV-TPHQE 278


>ref|XP_002315052.1| predicted protein [Populus trichocarpa] gi|222864092|gb|EEF01223.1|
           predicted protein [Populus trichocarpa]
          Length = 280

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 43/73 (58%), Positives = 44/73 (60%)
 Frame = +1

Query: 1   STFFTLFLLRATGFLLPCYIMAWAISIXXXXXXXXXXXXXXXXXXXXVLQSRQTGGLQFT 180
           S FF+LFLLRA GFLLPCYIMAWAISI                    VLQS Q  GLQFT
Sbjct: 207 SAFFSLFLLRAAGFLLPCYIMAWAISILQRRRQRQEAAALAATQVAFVLQSGQQRGLQFT 266

Query: 181 IASAPTVTTPQQE 219
           IA  PTV TP QE
Sbjct: 267 IAPGPTV-TPHQE 278


>ref|XP_003556812.1| PREDICTED: uncharacterized protein LOC100817542 [Glycine max]
          Length = 286

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 43/76 (56%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
 Frame = +1

Query: 1   STFFTLFLLRATGFLLPCYIMAWAISIXXXXXXXXXXXXXXXXXXXXVLQSRQTGGLQFT 180
           STFF+LFLLRA GFLLPCYIMAWAISI                    VLQS Q  GLQF 
Sbjct: 211 STFFSLFLLRAAGFLLPCYIMAWAISILQRRRQRQEAAALAATQVAFVLQSGQRRGLQFA 270

Query: 181 IA-SAPTVTTPQQEQL 225
           IA   PT+ T QQEQ+
Sbjct: 271 IAPGPPTMNTHQQEQV 286


>ref|XP_002522435.1| membrane associated ring finger 1,8, putative [Ricinus communis]
           gi|223538320|gb|EEF39927.1| membrane associated ring
           finger 1,8, putative [Ricinus communis]
          Length = 283

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 41/72 (56%), Positives = 43/72 (59%)
 Frame = +1

Query: 1   STFFTLFLLRATGFLLPCYIMAWAISIXXXXXXXXXXXXXXXXXXXXVLQSRQTGGLQFT 180
           STFF+LFLLRA GFLLPCYIMAWAISI                    VLQS Q  GL FT
Sbjct: 210 STFFSLFLLRAAGFLLPCYIMAWAISILQRRRQRQEAAALAATQVAFVLQSGQHRGLHFT 269

Query: 181 IASAPTVTTPQQ 216
           IAS P VT  Q+
Sbjct: 270 IASGPQVTAHQE 281


>emb|CBI31954.3| unnamed protein product [Vitis vinifera]
          Length = 591

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 40/72 (55%), Positives = 43/72 (59%)
 Frame = +1

Query: 1   STFFTLFLLRATGFLLPCYIMAWAISIXXXXXXXXXXXXXXXXXXXXVLQSRQTGGLQFT 180
           STFF+LFLLRA GFLLPCYIMAWAISI                    VLQS Q  GLQFT
Sbjct: 518 STFFSLFLLRAAGFLLPCYIMAWAISILQRRRQRQEAAALAATQVAFVLQSGQRRGLQFT 577

Query: 181 IASAPTVTTPQQ 216
           +A A  V  PQ+
Sbjct: 578 VAPAHVVAPPQE 589


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