BLASTX nr result

ID: Panax21_contig00016233 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00016233
         (454 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004141127.1| PREDICTED: uncharacterized protein LOC101222...    82   3e-17
ref|XP_004170549.1| PREDICTED: double-stranded RNA-binding prote...    82   3e-17
ref|XP_002319709.1| predicted protein [Populus trichocarpa] gi|2...    86   3e-15
ref|XP_002525711.1| hypothetical protein RCOM_1321840 [Ricinus c...    85   7e-15
ref|XP_002325855.1| predicted protein [Populus trichocarpa] gi|2...    84   9e-15

>ref|XP_004141127.1| PREDICTED: uncharacterized protein LOC101222879 [Cucumis sativus]
          Length = 446

 Score = 81.6 bits (200), Expect(2) = 3e-17
 Identities = 37/74 (50%), Positives = 55/74 (74%)
 Frame = -1

Query: 313 YKLMLQIYAQRRKLSIPVYSSDKEGPPHALYFKAKVTVDGHPFESSRFYKTLKEAENAAA 134
           YK  LQ ++Q+R L++P+Y+ +++GPPHA  F+ KV +DG  +ES  F+ TLK+AENA A
Sbjct: 204 YKNKLQNFSQKRGLTLPMYTCERDGPPHASRFRCKVEIDGKTYESLEFHGTLKDAENAVA 263

Query: 133 QVAVMSFSLDGFRE 92
           +VA+MS   DG +E
Sbjct: 264 KVALMSLCQDGAQE 277



 Score = 31.6 bits (70), Expect(2) = 3e-17
 Identities = 15/37 (40%), Positives = 23/37 (62%)
 Frame = -3

Query: 113 FVRWLSREGDTFHGAAAKSKKQAESNAAKLAYTALTE 3
           FV  +    + F G  +++KKQAE +AAK+AY  + E
Sbjct: 315 FVSTVKVGEENFEGKPSRTKKQAEMSAAKVAYFTIKE 351


>ref|XP_004170549.1| PREDICTED: double-stranded RNA-binding protein 4-like [Cucumis
           sativus]
          Length = 247

 Score = 81.6 bits (200), Expect(2) = 3e-17
 Identities = 37/74 (50%), Positives = 55/74 (74%)
 Frame = -1

Query: 313 YKLMLQIYAQRRKLSIPVYSSDKEGPPHALYFKAKVTVDGHPFESSRFYKTLKEAENAAA 134
           YK  LQ ++Q+R L++P+Y+ +++GPPHA  F+ KV +DG  +ES  F+ TLK+AENA A
Sbjct: 5   YKNKLQNFSQKRGLTLPMYTCERDGPPHASRFRCKVEIDGKTYESLEFHGTLKDAENAVA 64

Query: 133 QVAVMSFSLDGFRE 92
           +VA+MS   DG +E
Sbjct: 65  KVALMSLCQDGAQE 78



 Score = 31.6 bits (70), Expect(2) = 3e-17
 Identities = 15/37 (40%), Positives = 23/37 (62%)
 Frame = -3

Query: 113 FVRWLSREGDTFHGAAAKSKKQAESNAAKLAYTALTE 3
           FV  +    + F G  +++KKQAE +AAK+AY  + E
Sbjct: 116 FVSTVKVGEENFEGKPSRTKKQAEMSAAKVAYFTIKE 152


>ref|XP_002319709.1| predicted protein [Populus trichocarpa] gi|222858085|gb|EEE95632.1|
           predicted protein [Populus trichocarpa]
          Length = 240

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 41/87 (47%), Positives = 57/87 (65%)
 Frame = -1

Query: 328 DAPNQYKLMLQIYAQRRKLSIPVYSSDKEGPPHALYFKAKVTVDGHPFESSRFYKTLKEA 149
           D    +K  LQ YAQ+R  ++PVYS ++ GPPH+  FK KVTV+G  FES  ++ TL +A
Sbjct: 83  DMQRLFKSQLQTYAQKRNFALPVYSCERVGPPHSSRFKCKVTVNGQTFESLEYFSTLNKA 142

Query: 148 ENAAAQVAVMSFSLDGFREKEILFMGQ 68
           E+AAA+ A+MS   +G  E   LFM +
Sbjct: 143 EHAAAKAALMSLLPNGVEEVSFLFMDE 169


>ref|XP_002525711.1| hypothetical protein RCOM_1321840 [Ricinus communis]
           gi|223535011|gb|EEF36694.1| hypothetical protein
           RCOM_1321840 [Ricinus communis]
          Length = 162

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 39/79 (49%), Positives = 56/79 (70%)
 Frame = -1

Query: 313 YKLMLQIYAQRRKLSIPVYSSDKEGPPHALYFKAKVTVDGHPFESSRFYKTLKEAENAAA 134
           YK +LQ YAQ+R L +P+YS +++GPPHA  FK KVT+DG  +E   F+ T+ +AE+AAA
Sbjct: 82  YKNLLQSYAQKRGLPLPMYSCERQGPPHASLFKCKVTIDGKSYECLDFFPTVSKAEHAAA 141

Query: 133 QVAVMSFSLDGFREKEILF 77
           + A+ S + DG  E  +LF
Sbjct: 142 KAALTSLAPDGAEEASLLF 160


>ref|XP_002325855.1| predicted protein [Populus trichocarpa] gi|222862730|gb|EEF00237.1|
           predicted protein [Populus trichocarpa]
          Length = 281

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 41/90 (45%), Positives = 59/90 (65%)
 Frame = -1

Query: 313 YKLMLQIYAQRRKLSIPVYSSDKEGPPHALYFKAKVTVDGHPFESSRFYKTLKEAENAAA 134
           +K  LQ YAQ+R  + PVYS ++ GPPHA+ FK KVTV+G  +ES  ++ TL +AENAAA
Sbjct: 136 FKNQLQTYAQKRNFTRPVYSCERVGPPHAIRFKCKVTVNGQTYESREYFPTLSKAENAAA 195

Query: 133 QVAVMSFSLDGFREKEILFMGQLQNPRNKQ 44
           + A+MS   +G  E E  +   LQ+   ++
Sbjct: 196 KAALMSLLPNGVEEDESGYKNLLQDMAQRE 225


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