BLASTX nr result
ID: Panax21_contig00016230
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00016230
(2363 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002278014.2| PREDICTED: pentatricopeptide repeat-containi... 573 e-161
ref|XP_002512275.1| pentatricopeptide repeat-containing protein,... 545 e-152
ref|XP_002326124.1| predicted protein [Populus trichocarpa] gi|2... 537 e-150
ref|XP_004157939.1| PREDICTED: pentatricopeptide repeat-containi... 536 e-149
ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containi... 536 e-149
>ref|XP_002278014.2| PREDICTED: pentatricopeptide repeat-containing protein At2g06000-like
[Vitis vinifera]
Length = 641
Score = 573 bits (1476), Expect = e-161
Identities = 305/554 (55%), Positives = 387/554 (69%), Gaps = 8/554 (1%)
Frame = +1
Query: 343 PRVKRVSKIAAAAGFHGQANVESRPSNNPETV-----WFIKVLCTLCIRSSPSLDIFSSH 507
P R SKIA A FH A SR N PE + W +KV+CTLC+R+ SLD
Sbjct: 42 PSRVRASKIAIAQ-FHEHAVGISR--NRPEVIQNPENWIVKVICTLCVRTH-SLDACLD- 96
Query: 508 YFRNNLSPFLAFEVIKHVNFNFKNPKLAFNFFQLTRLNLKLIHSFVTYNLLLRSFCEMGL 687
YF L+P +AFEV++ +N NP+LA FFQL+R+NL L HSF TY+ LLRS EMG
Sbjct: 97 YFSKTLTPSIAFEVVRGLN----NPELALKFFQLSRVNLNLCHSFRTYSFLLRSLSEMGF 152
Query: 688 HDLAKLVLDCMRMDGYLLDNWLFEFLVMSFANAGKFEIAKDLFIAQELLISRSSKDKVGK 867
H+ AK V DCM +DG+ D + FLV S +AGKF IA+ E
Sbjct: 153 HESAKAVYDCMNIDGHSPDASVLGFLVSSATDAGKFNIARTWVDGVEF------------ 200
Query: 868 TSSFVYNNFLSFLVKLNRVNEAVGFFRDHILRSKCYFPDTCTFNIVLRGMCRAGEVNKAS 1047
S VYN L+ LV+ N+V+EAV FFR+ + + D+C+FNI++RG+CR G+V+KA
Sbjct: 201 -SLVVYNKLLNQLVRGNQVDEAVCFFREQMGLHGPF--DSCSFNILIRGLCRIGKVDKAF 257
Query: 1048 VLFNDMSSFGCLPDVVSYNTLINGLSRIGNLDKARELLRKIQSQDDFLPDVVSYTSVISG 1227
LFN+M FGC PDV++YNTLING R+ +D+ +LL+++ S++D PDVV+YTS+ISG
Sbjct: 258 ELFNEMRGFGCSPDVITYNTLINGFCRVNEVDRGHDLLKELLSKNDLSPDVVTYTSIISG 317
Query: 1228 YCKLGEMEKALNLFNEMISDGIKPSLVTFNALIDGFGKSNDMGSALNMFERMLILGCPPD 1407
YCKLG+MEKA LFN MIS GIKP+ TFN LI+GFGK DM SA NM+E ML+LGCPPD
Sbjct: 318 YCKLGKMEKASILFNNMISSGIKPNAFTFNILINGFGKVGDMVSAENMYEEMLLLGCPPD 377
Query: 1408 VVTFTSLVDGHCRMGQVDHGLKICNEMKARKLPPNVYTFSVIINALCKQNRLNEARDFLK 1587
++TFTSL+DGHCR G+V+ LK+ +E+ AR L PN YTF+++ NALCK+NRL+EAR FL+
Sbjct: 378 IITFTSLIDGHCRTGKVERSLKLWHELNARNLSPNEYTFAILTNALCKENRLHEARGFLR 437
Query: 1588 QLNCRGDIVPQPFLYNPVIDGFCKAGNVDEANVIVKEMEEKKCNPDKLTFTILILGHCMK 1767
L R IV QPF+YNPVIDGFCKAGNVDEANVI+ EMEEK+C PDK+T+TILI+GHCMK
Sbjct: 438 DLKWR-HIVAQPFMYNPVIDGFCKAGNVDEANVILAEMEEKRCKPDKITYTILIIGHCMK 496
Query: 1768 CKMLEALSIFNKMLVVGCTPDTITVNSLISCLRKAGMPNEAYKIRLAVSGYLDXXXXXXX 1947
++ EA+SIFN+ML GC PD+IT+ SLISCL KAGMPNEAY+I S +
Sbjct: 497 GRLSEAISIFNRMLGTGCAPDSITMTSLISCLLKAGMPNEAYRIMQIASEDFNLGLKSLK 556
Query: 1948 RTIP---NMDIPVA 1980
R +P N DIPVA
Sbjct: 557 RNVPLRTNTDIPVA 570
>ref|XP_002512275.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223548236|gb|EEF49727.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 532
Score = 545 bits (1403), Expect = e-152
Identities = 287/537 (53%), Positives = 375/537 (69%), Gaps = 4/537 (0%)
Frame = +1
Query: 382 GFHGQANVESRPSNNPETVWFIKVLCTLCIRSSPSLDIFSSHYFRNNLS-PFLAFEVIKH 558
GFH ++ E N + WF+KV+ L +RS S D S Y L+ P +AFEVIK
Sbjct: 12 GFHPFSDKEVIVKN--QEAWFVKVIAILFVRSHCS-DATSLGYLSEKLNDPLVAFEVIKR 68
Query: 559 VNFNFKNPKLAFNFFQLTRLNLKLIHSFVTYNLLLRSFCEMGLHDLAKLVLDCMRMDGYL 738
+N NP++ F + RLN LIH F TY LL+RS C+MGLHDL ++V+ MR DG+L
Sbjct: 69 LN---NNPQVGLKFMEFCRLNFSLIHCFSTYELLIRSLCQMGLHDLVEMVIGYMRSDGHL 125
Query: 739 LDNWLFEFLVMSFANAGKFEIAKDLFIAQELLISRSSKDKVGKTSSFVYNNFLSFLVKLN 918
+D+ + FLV SFA AGKF++AK L I + + + SSFVYN L+ LVK
Sbjct: 126 IDSRVLGFLVTSFAQAGKFDLAKKLIIEVQ--------GEEARISSFVYNYLLNELVKGG 177
Query: 919 RVNEAVGFFRDHILRSKCYFPDTCTFNIVLRGMCRAGEVNKASVLFNDMSSFGCLPDVVS 1098
+V+EA+ F++++ P+T TFNI++RG+CR GEV K LFN M SFGCLPDVV+
Sbjct: 178 KVHEAIFLFKENLAFHSP--PNTWTFNILIRGLCRVGEVEKGFELFNAMQSFGCLPDVVT 235
Query: 1099 YNTLINGLSRIGNLDKARELLRKIQSQDDFLPDVVSYTSVISGYCKLGEMEKALNLFNEM 1278
YNTLI+GL + LD+A +LL+++QS++D PDV++YTS+ISG+ KLG++E A LF EM
Sbjct: 236 YNTLISGLCKANELDRACDLLKEVQSRNDCSPDVMTYTSIISGFRKLGKLEAASVLFEEM 295
Query: 1279 ISDGIKPSLVTFNALIDGFGKSNDMGSALNMFERMLILGCPPDVVTFTSLVDGHCRMGQV 1458
I GI+P++VTFN LIDGFGK +M +A M E+M C PDVVTFTSL+DG+CR G +
Sbjct: 296 IRSGIEPTVVTFNVLIDGFGKIGNMVAAEAMHEKMASYSCIPDVVTFTSLIDGYCRTGDI 355
Query: 1459 DHGLKICNEMKARKLPPNVYTFSVIINALCKQNRLNEARDFLKQLNCRGDIVPQPFLYNP 1638
GLK+ + MKAR + PN+YT+SVIINALCK NR++EARD L+QL C D+ P+PF+YNP
Sbjct: 356 RLGLKVWDVMKARNVSPNIYTYSVIINALCKDNRIHEARDLLRQLKC-SDVFPKPFIYNP 414
Query: 1639 VIDGFCKAGNVDEANVIVKEMEEKKCNPDKLTFTILILGHCMKCKMLEALSIFNKMLVVG 1818
VIDGFCKAGNVDEANVIV EMEEK+C PDK+TFTILI+GHCMK +M+EAL IF KML +G
Sbjct: 415 VIDGFCKAGNVDEANVIVTEMEEKRCRPDKVTFTILIIGHCMKGRMVEALDIFKKMLAIG 474
Query: 1819 CTPDTITVNSLISCLRKAGMPNEAYKIRLAVSGYLDXXXXXXXRTIP---NMDIPVA 1980
C PD IT++SL++CL KAG P+EA+ I S L+ +T P DI VA
Sbjct: 475 CAPDNITISSLVACLLKAGKPSEAFHIVQTASEDLNLSFSSLRKTFPMRVKTDISVA 531
>ref|XP_002326124.1| predicted protein [Populus trichocarpa] gi|222833317|gb|EEE71794.1|
predicted protein [Populus trichocarpa]
Length = 512
Score = 537 bits (1384), Expect = e-150
Identities = 272/498 (54%), Positives = 351/498 (70%), Gaps = 3/498 (0%)
Frame = +1
Query: 499 SSHYFRNNLSPFLAFEVIKHVNFNFKNPKLAFNFFQLTRLNLKLIHSFVTYNLLLRSFCE 678
S Y L+P +AFEVIK F NPK+ F F + +RLNL + H + TYNLL+RS C+
Sbjct: 30 SRFYPDRQLTPLIAFEVIKR----FNNPKVGFKFLEFSRLNLNVNHCYSTYNLLMRSLCQ 85
Query: 679 MGLHDLAKLVLDCMRMDGYLLDNWLFEFLVMSFANAGKFEIAKDLFIAQELLISRSSKDK 858
MG HDL +V D M DG+L D+ L FLV A A F++ K L + K
Sbjct: 86 MGHHDLVNIVFDYMGSDGHLPDSKLLGFLVTWMAQASDFDMVKKLLAEVQ--------GK 137
Query: 859 VGKTSSFVYNNFLSFLVKLNRVNEAVGFFRDHILRSKCYFPDTCTFNIVLRGMCRAGEVN 1038
+ +SFVYNN LS LVK N+V+EA+ F+++++ PDT TFNI++RG+CR G V+
Sbjct: 138 EVRINSFVYNNLLSVLVKQNQVHEAIYLFKEYLVMQSP--PDTWTFNILIRGLCRVGGVD 195
Query: 1039 KASVLFNDMSSFGCLPDVVSYNTLINGLSRIGNLDKARELLRKIQSQDDFLPDVVSYTSV 1218
+A +F DM SFGCLPDVV+YNTLINGL + + + EL ++IQS+ D PD+V+YTS+
Sbjct: 196 RAFEVFKDMESFGCLPDVVTYNTLINGLCKANEVQRGCELFKEIQSRSDCSPDIVTYTSI 255
Query: 1219 ISGYCKLGEMEKALNLFNEMISDGIKPSLVTFNALIDGFGKSNDMGSALNMFERMLILGC 1398
ISG+CK G+M++A NLF EM+ GI+P+++TFN LIDGFGK ++ A M+ +M C
Sbjct: 256 ISGFCKSGKMKEASNLFEEMMRSGIQPNVITFNVLIDGFGKIGNIAEAEAMYRKMAYFDC 315
Query: 1399 PPDVVTFTSLVDGHCRMGQVDHGLKICNEMKARKLPPNVYTFSVIINALCKQNRLNEARD 1578
DVVTFTSL+DG+CR GQV+HGLK N MK R + P VYT++V+INALCK+NRLNEARD
Sbjct: 316 SADVVTFTSLIDGYCRAGQVNHGLKFWNVMKTRNVSPTVYTYAVLINALCKENRLNEARD 375
Query: 1579 FLKQLNCRGDIVPQPFLYNPVIDGFCKAGNVDEANVIVKEMEEKKCNPDKLTFTILILGH 1758
FL Q+ I+P+PF+YNPVIDGFCKAGNVDE NVI+KEMEEK+C+PDK+TFTILI+GH
Sbjct: 376 FLGQIK-NSSIIPKPFMYNPVIDGFCKAGNVDEGNVILKEMEEKRCDPDKVTFTILIIGH 434
Query: 1759 CMKCKMLEALSIFNKMLVVGCTPDTITVNSLISCLRKAGMPNEAYKIRLAVSGYLDXXXX 1938
C+K +M EA++IFN+ML C PD ITVNSLISCL KAGMPNEAY+IR +
Sbjct: 435 CVKGRMFEAINIFNRMLATRCAPDNITVNSLISCLLKAGMPNEAYRIRKMALEDRNLGLS 494
Query: 1939 XXXRTIP---NMDIPVAV 1983
+ IP N DIPVAV
Sbjct: 495 SFEKAIPLRTNTDIPVAV 512
>ref|XP_004157939.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000-like
[Cucumis sativus]
Length = 548
Score = 536 bits (1380), Expect = e-149
Identities = 269/491 (54%), Positives = 352/491 (71%), Gaps = 1/491 (0%)
Frame = +1
Query: 439 WFIKVLCTLCIRSSPSLDIFSSHYFRNNLSPFLAFEVIKHVNFNFKNPKLAFNFFQLTRL 618
W +KV+CTL RS F Y NL+P +AFEVIK F +P L FF+ +R
Sbjct: 48 WLVKVVCTLFFRSHSLNACFG--YLSRNLNPSIAFEVIKR----FSDPLLGLKFFEFSRT 101
Query: 619 NLKLIHSFVTYNLLLRSFCEMGLHDLAKLVLDCMRMDGYLLDNWLFEFLVMSFANAGKFE 798
+L + H+F TY+LL+R+ C++GL+D AK+V DCMR DG L D+ + E LV S+A GK +
Sbjct: 102 HLSINHTFNTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLD 161
Query: 799 IAKDLFIAQELLISRSSKDKVG-KTSSFVYNNFLSFLVKLNRVNEAVGFFRDHILRSKCY 975
AK+ + G K S FVYNN L+ LVK N V+EAV FR+H+ +
Sbjct: 162 SAKNFL---------NEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHL--EPYF 210
Query: 976 FPDTCTFNIVLRGMCRAGEVNKASVLFNDMSSFGCLPDVVSYNTLINGLSRIGNLDKARE 1155
PD +FNI++RG+CR GE++KA F +M +FGC PD+VSYNTLING R+ + K +
Sbjct: 211 VPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHD 270
Query: 1156 LLRKIQSQDDFLPDVVSYTSVISGYCKLGEMEKALNLFNEMISDGIKPSLVTFNALIDGF 1335
LL++ PDV++YTS+ISGYCKLG+M+ A LF+EM+S GIKP+ TFN LIDGF
Sbjct: 271 LLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGF 330
Query: 1336 GKSNDMGSALNMFERMLILGCPPDVVTFTSLVDGHCRMGQVDHGLKICNEMKARKLPPNV 1515
GK +M SA+ M+E+ML+LGC PDVVTFTSL+DG+CR G+V+ GLK+ EMK R L PNV
Sbjct: 331 GKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNV 390
Query: 1516 YTFSVIINALCKQNRLNEARDFLKQLNCRGDIVPQPFLYNPVIDGFCKAGNVDEANVIVK 1695
YT++V+INALCK+NR+ EAR+FL+ L ++VP+PF+YNPVIDGFCKAG VDEAN IV
Sbjct: 391 YTYAVLINALCKENRIREARNFLRHLK-SSEVVPKPFIYNPVIDGFCKAGKVDEANFIVA 449
Query: 1696 EMEEKKCNPDKLTFTILILGHCMKCKMLEALSIFNKMLVVGCTPDTITVNSLISCLRKAG 1875
EM+EKKC PDK+TFTILI+G+CMK +M+EA+S F KM+ + C PD IT+NSLISCL KAG
Sbjct: 450 EMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKAG 509
Query: 1876 MPNEAYKIRLA 1908
MPNEA +I+ A
Sbjct: 510 MPNEASQIKQA 520
>ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000-like
[Cucumis sativus]
Length = 548
Score = 536 bits (1380), Expect = e-149
Identities = 269/491 (54%), Positives = 352/491 (71%), Gaps = 1/491 (0%)
Frame = +1
Query: 439 WFIKVLCTLCIRSSPSLDIFSSHYFRNNLSPFLAFEVIKHVNFNFKNPKLAFNFFQLTRL 618
W +KV+CTL RS F Y NL+P +AFEVIK F +P L FF+ +R
Sbjct: 48 WLVKVVCTLFFRSHSLNACFG--YLSRNLNPSIAFEVIKR----FSDPLLGLKFFEFSRT 101
Query: 619 NLKLIHSFVTYNLLLRSFCEMGLHDLAKLVLDCMRMDGYLLDNWLFEFLVMSFANAGKFE 798
+L + H+F TY+LL+R+ C++GL+D AK+V DCMR DG L D+ + E LV S+A GK +
Sbjct: 102 HLSINHTFNTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLD 161
Query: 799 IAKDLFIAQELLISRSSKDKVG-KTSSFVYNNFLSFLVKLNRVNEAVGFFRDHILRSKCY 975
AK+ + G K S FVYNN L+ LVK N V+EAV FR+H+ +
Sbjct: 162 SAKNFL---------NEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHL--EPYF 210
Query: 976 FPDTCTFNIVLRGMCRAGEVNKASVLFNDMSSFGCLPDVVSYNTLINGLSRIGNLDKARE 1155
PD +FNI++RG+CR GE++KA F +M +FGC PD+VSYNTLING R+ + K +
Sbjct: 211 VPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHD 270
Query: 1156 LLRKIQSQDDFLPDVVSYTSVISGYCKLGEMEKALNLFNEMISDGIKPSLVTFNALIDGF 1335
LL++ PDV++YTS+ISGYCKLG+M+ A LF+EM+S GIKP+ TFN LIDGF
Sbjct: 271 LLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGF 330
Query: 1336 GKSNDMGSALNMFERMLILGCPPDVVTFTSLVDGHCRMGQVDHGLKICNEMKARKLPPNV 1515
GK +M SA+ M+E+ML+LGC PDVVTFTSL+DG+CR G+V+ GLK+ EMK R L PNV
Sbjct: 331 GKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNV 390
Query: 1516 YTFSVIINALCKQNRLNEARDFLKQLNCRGDIVPQPFLYNPVIDGFCKAGNVDEANVIVK 1695
YT++V+INALCK+NR+ EAR+FL+ L ++VP+PF+YNPVIDGFCKAG VDEAN IV
Sbjct: 391 YTYAVLINALCKENRIREARNFLRHLK-SSEVVPKPFIYNPVIDGFCKAGKVDEANFIVA 449
Query: 1696 EMEEKKCNPDKLTFTILILGHCMKCKMLEALSIFNKMLVVGCTPDTITVNSLISCLRKAG 1875
EM+EKKC PDK+TFTILI+G+CMK +M+EA+S F KM+ + C PD IT+NSLISCL KAG
Sbjct: 450 EMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKAG 509
Query: 1876 MPNEAYKIRLA 1908
MPNEA +I+ A
Sbjct: 510 MPNEASQIKQA 520