BLASTX nr result

ID: Panax21_contig00016229 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00016229
         (737 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310338.1| white-brown-complex ABC transporter family [...   346   3e-93
ref|XP_002527217.1| ATP-binding cassette transporter, putative [...   326   3e-87
emb|CAN62797.1| hypothetical protein VITISV_026840 [Vitis vinifera]   318   6e-85
ref|XP_003533431.1| PREDICTED: ABC transporter G family member 6...   285   9e-75
ref|XP_003612949.1| ABC transporter G family member [Medicago tr...   275   9e-72

>ref|XP_002310338.1| white-brown-complex ABC transporter family [Populus trichocarpa]
           gi|222853241|gb|EEE90788.1| white-brown-complex ABC
           transporter family [Populus trichocarpa]
          Length = 732

 Score =  346 bits (887), Expect = 3e-93
 Identities = 183/248 (73%), Positives = 205/248 (82%), Gaps = 4/248 (1%)
 Frame = -2

Query: 736 STQNTYIGDEATRGVSGGEHRRVSIGMYIIHGPSLLFLDEPTSGLDSTSAQSVIEKVHDI 557
           S++NTYIGDE TRGVSGGE RRVSIG+ IIHGPSLLFLDEPTSGLDSTSA SVIEKVH I
Sbjct: 162 SSRNTYIGDEGTRGVSGGERRRVSIGVDIIHGPSLLFLDEPTSGLDSTSAHSVIEKVHHI 221

Query: 556 ARYRSTVILTIHQPSSRIQLLLDHLTILARG*LMYQGSPKDVSLHLGRMGRKVPKGENSI 377
           AR  STVILTIHQPSSRIQLLLDHL ILARG LMYQGSPKDV+LHL RMGRKVPKGENSI
Sbjct: 222 ARSGSTVILTIHQPSSRIQLLLDHLIILARGQLMYQGSPKDVTLHLSRMGRKVPKGENSI 281

Query: 376 EYLIDVIQEYDQSDHGVEALADFALIGMKPPVLSEEEISMTLVLLSPTPP--HLSCHQ-G 206
           EYLID IQEYDQS+ GVEALA+FA  GMKPP+LS E++S++ +  +PTPP  H S HQ G
Sbjct: 282 EYLIDAIQEYDQSELGVEALAEFARTGMKPPLLSNEDVSISTI--APTPPLRHNSHHQKG 339

Query: 205 QDPADKGSSGKRLYLQTGAPKDKDFDNSVRSPWNQ-SRPWSASQSGIIQTLRFTPSSQRT 29
             P D+ + GKRL+LQT   +  +FD+SVRSP+N  SR WSAS SG++QTLRFTPS QR 
Sbjct: 340 GRPGDRPNDGKRLHLQTSTREPNEFDHSVRSPFNNTSRSWSASHSGVVQTLRFTPSRQRN 399

Query: 28  DNKAHNPM 5
           D    NPM
Sbjct: 400 DKTIQNPM 407


>ref|XP_002527217.1| ATP-binding cassette transporter, putative [Ricinus communis]
           gi|223533393|gb|EEF35143.1| ATP-binding cassette
           transporter, putative [Ricinus communis]
          Length = 724

 Score =  326 bits (836), Expect = 3e-87
 Identities = 169/244 (69%), Positives = 194/244 (79%)
 Frame = -2

Query: 736 STQNTYIGDEATRGVSGGEHRRVSIGMYIIHGPSLLFLDEPTSGLDSTSAQSVIEKVHDI 557
           S++NTYIGDE  RGVSGGE RRVSIG+ IIHGPSLLFLDEPTSGLDSTSA SV+EK+H I
Sbjct: 161 SSRNTYIGDEGIRGVSGGERRRVSIGVDIIHGPSLLFLDEPTSGLDSTSAHSVVEKIHHI 220

Query: 556 ARYRSTVILTIHQPSSRIQLLLDHLTILARG*LMYQGSPKDVSLHLGRMGRKVPKGENSI 377
           AR  STVILTIHQPSSRIQLLLDHL +LARG LM+QGSPKDV+LHL RMGRKVP+GENSI
Sbjct: 221 ARSGSTVILTIHQPSSRIQLLLDHLAVLARGQLMFQGSPKDVTLHLSRMGRKVPRGENSI 280

Query: 376 EYLIDVIQEYDQSDHGVEALADFALIGMKPPVLSEEEISMTLVLLSPTPPHLSCHQGQDP 197
           EYLIDVIQEYDQSDHGVEALA+FAL GMKPP LS+EE+S++ V  +PTPP    ++ Q  
Sbjct: 281 EYLIDVIQEYDQSDHGVEALAEFALTGMKPPKLSDEEMSVSTV--APTPPPSRQNRAQVE 338

Query: 196 ADKGSSGKRLYLQTGAPKDKDFDNSVRSPWNQSRPWSASQSGIIQTLRFTPSSQRTDNKA 17
                +G+RL LQT      +F++S+RSP      WS S  G++QTLRFTP  QR D K 
Sbjct: 339 LGASGNGRRLPLQTSTQDSSEFEHSLRSP-----SWSGSHVGVVQTLRFTPVRQRNDKKL 393

Query: 16  HNPM 5
            NPM
Sbjct: 394 QNPM 397


>emb|CAN62797.1| hypothetical protein VITISV_026840 [Vitis vinifera]
          Length = 725

 Score =  318 bits (816), Expect = 6e-85
 Identities = 171/245 (69%), Positives = 193/245 (78%), Gaps = 1/245 (0%)
 Frame = -2

Query: 736 STQNTYIGDEATRGVSGGEHRRVSIGMYIIHGPSLLFLDEPTSGLDSTSAQSVIEKVHDI 557
           S++NTYIGDE  RGVSGGE RRVSIG+ IIHGPSLLFLDEPTSGLDS+SA SVIEKVHDI
Sbjct: 162 SSRNTYIGDEGARGVSGGERRRVSIGVDIIHGPSLLFLDEPTSGLDSSSAYSVIEKVHDI 221

Query: 556 ARYRSTVILTIHQPSSRIQLLLDHLTILARG*LMYQGSPKDVSLHLGRMGRKVPKGENSI 377
           AR  STVILTIHQPSSRI LLLDHL +LA+G LM+QGSPKDV  HL  M RKVPKGEN +
Sbjct: 222 ARAGSTVILTIHQPSSRILLLLDHLIVLAKGQLMFQGSPKDVGHHLRGMDRKVPKGENPV 281

Query: 376 EYLIDVIQEYDQSDHGVEALADFALIGMKPPVLSEEEISMTLVLLSPTPPHLSCHQGQDP 197
           EYLIDVIQEY+QS+HGVE LA F   G+KPP LSEEE+SM+ V  +PTP H   H     
Sbjct: 282 EYLIDVIQEYNQSEHGVEVLAXFVRTGLKPPPLSEEEVSMSTVPPTPTPSH---HHASPL 338

Query: 196 ADKGSSGKRLYLQTGAPKD-KDFDNSVRSPWNQSRPWSASQSGIIQTLRFTPSSQRTDNK 20
            +    G+RL LQ G+ +   DFD+S+RSP+N SR WSAS SGI+QTLRFTPS QRTD K
Sbjct: 339 VE----GRRLPLQAGSQRSATDFDHSLRSPYNYSRSWSASHSGIVQTLRFTPSRQRTDRK 394

Query: 19  AHNPM 5
             NPM
Sbjct: 395 M-NPM 398


>ref|XP_003533431.1| PREDICTED: ABC transporter G family member 6-like [Glycine max]
          Length = 729

 Score =  285 bits (728), Expect = 9e-75
 Identities = 158/243 (65%), Positives = 179/243 (73%), Gaps = 1/243 (0%)
 Frame = -2

Query: 736 STQNTYIGDEATRGVSGGEHRRVSIGMYIIHGPSLLFLDEPTSGLDSTSAQSVIEKVHDI 557
           S+QNTYIGDE TRGVSGGE RRVSIG+ IIHGPSLLFLDEPTSGLDSTSA SVIEKVHDI
Sbjct: 164 SSQNTYIGDEGTRGVSGGERRRVSIGVDIIHGPSLLFLDEPTSGLDSTSAHSVIEKVHDI 223

Query: 556 ARYRSTVILTIHQPSSRIQLLLDHLTILARG*LMYQGSPKDVSLHLGRMGRKVPKGENSI 377
           AR  STVILTIHQPSSRIQLLLDHL ILARG LM+QGSP+DV+LHL RM RK+PKGE+ I
Sbjct: 224 ARSGSTVILTIHQPSSRIQLLLDHLIILARGQLMFQGSPQDVALHLSRMPRKIPKGESPI 283

Query: 376 EYLIDVIQEYDQSDHGVEALADFALIGMKPPVLSEEEISMTLVLLSPTP-PHLSCHQGQD 200
           E LIDVIQEYDQS+ GVEALA+FA  G+KPP LSE+  S++ V  SP P  HL    G+ 
Sbjct: 284 ELLIDVIQEYDQSEVGVEALAEFARTGVKPPPLSEQLHSLSSVAPSPAPSSHLGHRYGEK 343

Query: 199 PADKGSSGKRLYLQTGAPKDKDFDNSVRSPWNQSRPWSASQSGIIQTLRFTPSSQRTDNK 20
             D   S      Q       DFD+S+RSP+N +   S S       L+FTPS  + D+K
Sbjct: 344 SQDFSYSS-----QVSRRVVDDFDHSLRSPYNNNTSMSWSTGNSAAFLKFTPSRLKNDHK 398

Query: 19  AHN 11
             N
Sbjct: 399 LQN 401


>ref|XP_003612949.1| ABC transporter G family member [Medicago truncatula]
           gi|163889368|gb|ABY48138.1| ABC transporter [Medicago
           truncatula] gi|258518205|gb|ACV73543.1| STR2 [Medicago
           truncatula] gi|258518207|gb|ACV73544.1| STR2 [Medicago
           truncatula] gi|355514284|gb|AES95907.1| ABC transporter
           G family member [Medicago truncatula]
          Length = 727

 Score =  275 bits (702), Expect = 9e-72
 Identities = 156/246 (63%), Positives = 180/246 (73%), Gaps = 3/246 (1%)
 Frame = -2

Query: 736 STQNTYIGDEATRGVSGGEHRRVSIGMYIIHGPSLLFLDEPTSGLDSTSAQSVIEKVHDI 557
           S++NTYIGDE TRGVSGGE RRVSIG+ IIHGPSLLFLDEPTSGLDSTSA SVIEK+HDI
Sbjct: 161 SSRNTYIGDEGTRGVSGGERRRVSIGVDIIHGPSLLFLDEPTSGLDSTSALSVIEKLHDI 220

Query: 556 ARYRSTVILTIHQPSSRIQLLLDHLTILARG*LMYQGSPKDVSLHLGRMGRKVPKGENSI 377
           AR  STVILTIHQPSSRIQLLLDHL ILARG LM+QGS KDV  HL RMGRK+PKGEN I
Sbjct: 221 ARNGSTVILTIHQPSSRIQLLLDHLIILARGQLMFQGSLKDVGHHLNRMGRKIPKGENPI 280

Query: 376 EYLIDVIQEYDQSDH-GVEALADFALIGMKPPVLSE-EEISMTLVLLSPTPPHLSCHQGQ 203
           E LIDVIQEYDQ D  GVE LA+FA  GMKPP+LS+ EEI      ++P+P  L  H+G 
Sbjct: 281 ENLIDVIQEYDQCDFVGVEVLAEFARTGMKPPLLSDMEEIISYTNSIAPSPSPL--HRGS 338

Query: 202 DPADKGSSGKRLYLQTGAPKDKDFDNSVRSPWNQS-RPWSASQSGIIQTLRFTPSSQRTD 26
              +K          +    + +FD+S+RSP+N +   WSAS S     L+FTPS  + +
Sbjct: 339 KYEEKSQDFSYSSQISRRSLNDEFDHSIRSPYNNTPMSWSASNSAAF--LKFTPSRLKNE 396

Query: 25  NKAHNP 8
           NK   P
Sbjct: 397 NKVQKP 402


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