BLASTX nr result

ID: Panax21_contig00016226 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00016226
         (632 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278585.1| PREDICTED: uncharacterized protein At1g26090...   140   3e-31
emb|CBI27076.3| unnamed protein product [Vitis vinifera]              140   3e-31
emb|CBI31035.3| unnamed protein product [Vitis vinifera]              131   9e-29
ref|XP_003633004.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   129   4e-28
gb|AFK38663.1| unknown [Medicago truncatula]                          127   2e-27

>ref|XP_002278585.1| PREDICTED: uncharacterized protein At1g26090, chloroplastic-like
           [Vitis vinifera]
          Length = 441

 Score =  140 bits (352), Expect = 3e-31
 Identities = 71/110 (64%), Positives = 84/110 (76%), Gaps = 8/110 (7%)
 Frame = +3

Query: 327 SPLIFQRSQSRFPAVIM--------AISSLENNAPQNPTKLVTFLGKGGSGKTTSAVFAA 482
           SPL+   + SR P   +        A+++  ++   + TKLVTFLGKGGSGKTTSA+FAA
Sbjct: 4   SPLLLSSALSRNPNSGLSIRRRRHGALATTASSEEDHSTKLVTFLGKGGSGKTTSAIFAA 63

Query: 483 QHYAMAGLKTCLVIHSQEPTAEYLLNCKIGTSPVACNNNLSAVRLETTKV 632
           QHYAM G  TCLVIHSQ+PTAEYLLNCKIGTSP+ CNNNLSAVRLETTK+
Sbjct: 64  QHYAMTGFNTCLVIHSQDPTAEYLLNCKIGTSPIICNNNLSAVRLETTKM 113


>emb|CBI27076.3| unnamed protein product [Vitis vinifera]
          Length = 441

 Score =  140 bits (352), Expect = 3e-31
 Identities = 71/110 (64%), Positives = 84/110 (76%), Gaps = 8/110 (7%)
 Frame = +3

Query: 327 SPLIFQRSQSRFPAVIM--------AISSLENNAPQNPTKLVTFLGKGGSGKTTSAVFAA 482
           SPL+   + SR P   +        A+++  ++   + TKLVTFLGKGGSGKTTSA+FAA
Sbjct: 4   SPLLLSSALSRNPNSGLSIRRRRHGALATTASSEEDHSTKLVTFLGKGGSGKTTSAIFAA 63

Query: 483 QHYAMAGLKTCLVIHSQEPTAEYLLNCKIGTSPVACNNNLSAVRLETTKV 632
           QHYAM G  TCLVIHSQ+PTAEYLLNCKIGTSP+ CNNNLSAVRLETTK+
Sbjct: 64  QHYAMTGFNTCLVIHSQDPTAEYLLNCKIGTSPIICNNNLSAVRLETTKM 113


>emb|CBI31035.3| unnamed protein product [Vitis vinifera]
          Length = 191

 Score =  131 bits (330), Expect = 9e-29
 Identities = 66/92 (71%), Positives = 75/92 (81%)
 Frame = +3

Query: 357 RFPAVIMAISSLENNAPQNPTKLVTFLGKGGSGKTTSAVFAAQHYAMAGLKTCLVIHSQE 536
           R  A+ M  SS E+++    T+LVTFLGKGGS KTTSA+FAAQHYAM G  TCLVIHSQ+
Sbjct: 44  RHGALAMTTSSEEDHS----TQLVTFLGKGGSDKTTSAIFAAQHYAMTGFNTCLVIHSQD 99

Query: 537 PTAEYLLNCKIGTSPVACNNNLSAVRLETTKV 632
           PTAEYLLNCKIGT P+ CNNNLS VRLETTK+
Sbjct: 100 PTAEYLLNCKIGTFPIICNNNLSVVRLETTKM 131


>ref|XP_003633004.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein At1g26090,
           chloroplastic-like [Vitis vinifera]
          Length = 410

 Score =  129 bits (324), Expect = 4e-28
 Identities = 64/86 (74%), Positives = 72/86 (83%)
 Frame = +3

Query: 375 MAISSLENNAPQNPTKLVTFLGKGGSGKTTSAVFAAQHYAMAGLKTCLVIHSQEPTAEYL 554
           M  SS E+++    T+LVTFLGKGGS KTTSA+FAAQHYAM G  TCLVIHSQ+PTAEYL
Sbjct: 1   MTTSSEEDHS----TQLVTFLGKGGSDKTTSAIFAAQHYAMTGFNTCLVIHSQDPTAEYL 56

Query: 555 LNCKIGTSPVACNNNLSAVRLETTKV 632
           LNCKIGT P+ CNNNLS VRLETTK+
Sbjct: 57  LNCKIGTFPIICNNNLSVVRLETTKM 82


>gb|AFK38663.1| unknown [Medicago truncatula]
          Length = 440

 Score =  127 bits (318), Expect = 2e-27
 Identities = 63/90 (70%), Positives = 75/90 (83%)
 Frame = +3

Query: 363 PAVIMAISSLENNAPQNPTKLVTFLGKGGSGKTTSAVFAAQHYAMAGLKTCLVIHSQEPT 542
           P + +A SS  ++     TKL+TFLGKGGSGKTT+A+FAAQH+AMAGL TCLVIHSQ+ T
Sbjct: 23  PLMAVASSSSSSSEDVASTKLLTFLGKGGSGKTTAAIFAAQHFAMAGLNTCLVIHSQDIT 82

Query: 543 AEYLLNCKIGTSPVACNNNLSAVRLETTKV 632
           A+YLLNCKIGTS V C+ NLSAVRLETTK+
Sbjct: 83  ADYLLNCKIGTSYVECSKNLSAVRLETTKM 112


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