BLASTX nr result

ID: Panax21_contig00016215 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00016215
         (561 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004135046.1| PREDICTED: charged multivesicular body prote...   121   7e-26
ref|XP_002316482.1| predicted protein [Populus trichocarpa] gi|2...   119   3e-25
ref|XP_002518614.1| Charged multivesicular body protein, putativ...   116   2e-24
ref|XP_002310998.1| predicted protein [Populus trichocarpa] gi|2...   111   7e-23
gb|AFK38216.1| unknown [Lotus japonicus]                              109   3e-22

>ref|XP_004135046.1| PREDICTED: charged multivesicular body protein 5-like [Cucumis
           sativus] gi|449522013|ref|XP_004168023.1| PREDICTED:
           charged multivesicular body protein 5-like [Cucumis
           sativus]
          Length = 237

 Score =  121 bits (304), Expect = 7e-26
 Identities = 57/71 (80%), Positives = 62/71 (87%)
 Frame = +3

Query: 3   ELDALEADMGLETESDGVPSYLQPDKESDLDAELNLPSAPIGQSAIPAARGNGQAEDEFG 182
           ELDALEADMG ETE+DGVPSYLQPDKESD + ELNLP+APIG +A+PA R N QAEDE G
Sbjct: 167 ELDALEADMGFETEADGVPSYLQPDKESDFEGELNLPAAPIGHAAVPAGRNNAQAEDELG 226

Query: 183 LPPVPHASLRG 215
           LP VPHASLRG
Sbjct: 227 LPAVPHASLRG 237


>ref|XP_002316482.1| predicted protein [Populus trichocarpa] gi|222865522|gb|EEF02653.1|
           predicted protein [Populus trichocarpa]
          Length = 236

 Score =  119 bits (298), Expect = 3e-25
 Identities = 61/71 (85%), Positives = 63/71 (88%)
 Frame = +3

Query: 3   ELDALEADMGLETESDGVPSYLQPDKESDLDAELNLPSAPIGQSAIPAARGNGQAEDEFG 182
           ELDALEADMG+ETESDGVPSYLQPDKESDLDAELNLPSAP GQ A PA+R N QAEDE G
Sbjct: 167 ELDALEADMGMETESDGVPSYLQPDKESDLDAELNLPSAPTGQGA-PASRYNAQAEDELG 225

Query: 183 LPPVPHASLRG 215
           LP VP ASLRG
Sbjct: 226 LPAVPRASLRG 236


>ref|XP_002518614.1| Charged multivesicular body protein, putative [Ricinus communis]
           gi|223542213|gb|EEF43756.1| Charged multivesicular body
           protein, putative [Ricinus communis]
          Length = 237

 Score =  116 bits (291), Expect = 2e-24
 Identities = 57/71 (80%), Positives = 60/71 (84%)
 Frame = +3

Query: 3   ELDALEADMGLETESDGVPSYLQPDKESDLDAELNLPSAPIGQSAIPAARGNGQAEDEFG 182
           ELDALEADMGLE E DGVPSYLQPDKE DLD+ELNLPSAP GQ+A PA R N QAEDE G
Sbjct: 167 ELDALEADMGLEIEGDGVPSYLQPDKEPDLDSELNLPSAPTGQAAGPAGRNNAQAEDELG 226

Query: 183 LPPVPHASLRG 215
           LP VP AS+RG
Sbjct: 227 LPAVPRASIRG 237


>ref|XP_002310998.1| predicted protein [Populus trichocarpa] gi|222850818|gb|EEE88365.1|
           predicted protein [Populus trichocarpa]
          Length = 236

 Score =  111 bits (278), Expect = 7e-23
 Identities = 56/71 (78%), Positives = 59/71 (83%)
 Frame = +3

Query: 3   ELDALEADMGLETESDGVPSYLQPDKESDLDAELNLPSAPIGQSAIPAARGNGQAEDEFG 182
           ELDALEADM +ETESDGVPSYLQPDKE D D+ELNLPSAP G +A PA R N QAEDE G
Sbjct: 167 ELDALEADMAMETESDGVPSYLQPDKEPDFDSELNLPSAPTGHAA-PAGRANNQAEDELG 225

Query: 183 LPPVPHASLRG 215
           LP VP ASLRG
Sbjct: 226 LPAVPRASLRG 236


>gb|AFK38216.1| unknown [Lotus japonicus]
          Length = 237

 Score =  109 bits (273), Expect = 3e-22
 Identities = 55/70 (78%), Positives = 57/70 (81%)
 Frame = +3

Query: 3   ELDALEADMGLETESDGVPSYLQPDKESDLDAELNLPSAPIGQSAIPAARGNGQAEDEFG 182
           ELDALE DMG ETE+DGVPSYLQPDKE DLDAELNLPSAP GQ+A P  R N Q EDE G
Sbjct: 167 ELDALELDMGNETEADGVPSYLQPDKEPDLDAELNLPSAPTGQTADPHGRFNAQTEDELG 226

Query: 183 LPPVPHASLR 212
           LP VP ASLR
Sbjct: 227 LPAVPRASLR 236


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