BLASTX nr result

ID: Panax21_contig00016194 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00016194
         (537 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276597.2| PREDICTED: transportin-3-like [Vitis vinifer...    74   1e-11
ref|XP_003624561.1| Transportin-3 [Medicago truncatula] gi|35549...    65   8e-09
ref|XP_002321068.1| predicted protein [Populus trichocarpa] gi|2...    64   2e-08
ref|XP_002512783.1| Transportin-3, putative [Ricinus communis] g...    63   2e-08
ref|XP_004161339.1| PREDICTED: transportin-3-like [Cucumis sativus]    59   3e-07

>ref|XP_002276597.2| PREDICTED: transportin-3-like [Vitis vinifera]
           gi|296082227|emb|CBI21232.3| unnamed protein product
           [Vitis vinifera]
          Length = 1015

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 34/46 (73%), Positives = 41/46 (89%)
 Frame = -3

Query: 535 VDDSTFNDDGGTVELPDGLLQFRLNLVEVLVDICQLLKSGPVIQKV 398
           VDDSTFND+ GT++LPDGL+ FR+NLVE+LVDICQLLKS   IQK+
Sbjct: 396 VDDSTFNDESGTLDLPDGLVHFRMNLVELLVDICQLLKSTTFIQKL 441


>ref|XP_003624561.1| Transportin-3 [Medicago truncatula] gi|355499576|gb|AES80779.1|
           Transportin-3 [Medicago truncatula]
          Length = 1143

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 30/51 (58%), Positives = 39/51 (76%)
 Frame = -3

Query: 535 VDDSTFNDDGGTVELPDGLLQFRLNLVEVLVDICQLLKSGPVIQKVLALGN 383
           VDDST+ND+G  ++LPDGL+ FR+NLVE+LVDIC LL S    QK+   G+
Sbjct: 517 VDDSTYNDEGRVIDLPDGLVHFRMNLVELLVDICHLLGSMIFTQKIFIGGS 567


>ref|XP_002321068.1| predicted protein [Populus trichocarpa] gi|222861841|gb|EEE99383.1|
           predicted protein [Populus trichocarpa]
          Length = 1008

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 30/46 (65%), Positives = 37/46 (80%)
 Frame = -3

Query: 535 VDDSTFNDDGGTVELPDGLLQFRLNLVEVLVDICQLLKSGPVIQKV 398
           VD+STF D+  TV+LPDGL  FR+NLVE+LVDICQLLK    +QK+
Sbjct: 389 VDESTFIDESETVDLPDGLAHFRMNLVELLVDICQLLKPTRFVQKL 434


>ref|XP_002512783.1| Transportin-3, putative [Ricinus communis]
           gi|223547794|gb|EEF49286.1| Transportin-3, putative
           [Ricinus communis]
          Length = 1020

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 29/47 (61%), Positives = 37/47 (78%)
 Frame = -3

Query: 535 VDDSTFNDDGGTVELPDGLLQFRLNLVEVLVDICQLLKSGPVIQKVL 395
           VD+S FND  G ++LPDGL+QFR NL E+LVDICQLL+    +QK+L
Sbjct: 397 VDESIFNDANGMLDLPDGLVQFRTNLAELLVDICQLLRPVTFVQKLL 443


>ref|XP_004161339.1| PREDICTED: transportin-3-like [Cucumis sativus]
          Length = 1029

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 24/50 (48%), Positives = 39/50 (78%)
 Frame = -3

Query: 535 VDDSTFNDDGGTVELPDGLLQFRLNLVEVLVDICQLLKSGPVIQKVLALG 386
           V +S FN++ G ++LPDGL+ FR+N+VE+LVD+CQ+L+S   ++K+   G
Sbjct: 397 VVESAFNEERGMIDLPDGLIHFRMNIVELLVDVCQILRSSRFMEKLFFSG 446


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