BLASTX nr result

ID: Panax21_contig00016175 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00016175
         (916 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17537.3| unnamed protein product [Vitis vinifera]              377   e-102
ref|XP_002270563.1| PREDICTED: putative F-box protein At3g23950 ...   377   e-102
emb|CAN82744.1| hypothetical protein VITISV_027510 [Vitis vinifera]   377   e-102
gb|AEI98629.1| hypothetical protein 111O18.16 [Coffea canephora]      375   e-102
ref|XP_002310219.1| predicted protein [Populus trichocarpa] gi|2...   350   3e-94

>emb|CBI17537.3| unnamed protein product [Vitis vinifera]
          Length = 412

 Score =  377 bits (967), Expect = e-102
 Identities = 177/257 (68%), Positives = 206/257 (80%)
 Frame = +3

Query: 144 MDRGKKPTKLLAARNRKLYMDLKDIIREHALAFLPAKSLFRCQGVCRDWKLQIATPFFAH 323
           MDRGK+P+K +   N K+YMDLKDIIRE+ L FLPAKSLFR  GVCRDWK+QI+TPFFAH
Sbjct: 56  MDRGKRPSKSIVGGNNKIYMDLKDIIREYTLPFLPAKSLFRFTGVCRDWKMQISTPFFAH 115

Query: 324 NQSLSFHGLSGLFCQTPGNPPSFISIDPKSCGVPDPPLKFLPVPVDIRTSSNGLLCCQGR 503
           NQS SFH +SGLF Q  G PPSFIS+DPK+ GVPDP LKFLPVPVDIR S NGLLCCQ R
Sbjct: 116 NQSNSFHAVSGLFYQIAGEPPSFISLDPKAYGVPDPSLKFLPVPVDIRASCNGLLCCQAR 175

Query: 504 TGDKAYYICNPVTQQWKILPEPNAIHGPEPAVVLVFEPSLLNFVAEYKLVCAFASADFDG 683
           TGDKAYY+CNP T+ WK LP+P+A HG +PA+V++FEPSLLNFVA+YKLVCAF S DFD 
Sbjct: 176 TGDKAYYMCNPATKMWKKLPKPDADHGTDPALVVIFEPSLLNFVADYKLVCAFPSTDFDD 235

Query: 684 ATEFEIYSSKEGSWRVSGEICFADKKLIPRSGVHVKGIIYWQAQSGSIVAFDLMKDRSQL 863
             EFEIYSS EG WR+S EIC  D+KL+P  GVHV GI+YWQ + G +VAFDL ++RSQL
Sbjct: 236 GYEFEIYSSAEGCWRISREICLGDRKLLPSPGVHVNGIVYWQMKHGVLVAFDLARERSQL 295

Query: 864 IQTYLGFNSSLGTMEGK 914
           I    G   +L  M+GK
Sbjct: 296 I---YGMKGALCVMQGK 309


>ref|XP_002270563.1| PREDICTED: putative F-box protein At3g23950 [Vitis vinifera]
          Length = 357

 Score =  377 bits (967), Expect = e-102
 Identities = 177/257 (68%), Positives = 206/257 (80%)
 Frame = +3

Query: 144 MDRGKKPTKLLAARNRKLYMDLKDIIREHALAFLPAKSLFRCQGVCRDWKLQIATPFFAH 323
           MDRGK+P+K +   N K+YMDLKDIIRE+ L FLPAKSLFR  GVCRDWK+QI+TPFFAH
Sbjct: 1   MDRGKRPSKSIVGGNNKIYMDLKDIIREYTLPFLPAKSLFRFTGVCRDWKMQISTPFFAH 60

Query: 324 NQSLSFHGLSGLFCQTPGNPPSFISIDPKSCGVPDPPLKFLPVPVDIRTSSNGLLCCQGR 503
           NQS SFH +SGLF Q  G PPSFIS+DPK+ GVPDP LKFLPVPVDIR S NGLLCCQ R
Sbjct: 61  NQSNSFHAVSGLFYQIAGEPPSFISLDPKAYGVPDPSLKFLPVPVDIRASCNGLLCCQAR 120

Query: 504 TGDKAYYICNPVTQQWKILPEPNAIHGPEPAVVLVFEPSLLNFVAEYKLVCAFASADFDG 683
           TGDKAYY+CNP T+ WK LP+P+A HG +PA+V++FEPSLLNFVA+YKLVCAF S DFD 
Sbjct: 121 TGDKAYYMCNPATKMWKKLPKPDADHGTDPALVVIFEPSLLNFVADYKLVCAFPSTDFDD 180

Query: 684 ATEFEIYSSKEGSWRVSGEICFADKKLIPRSGVHVKGIIYWQAQSGSIVAFDLMKDRSQL 863
             EFEIYSS EG WR+S EIC  D+KL+P  GVHV GI+YWQ + G +VAFDL ++RSQL
Sbjct: 181 GYEFEIYSSAEGCWRISREICLGDRKLLPSPGVHVNGIVYWQMKHGVLVAFDLARERSQL 240

Query: 864 IQTYLGFNSSLGTMEGK 914
           I    G   +L  M+GK
Sbjct: 241 I---YGMKGALCVMQGK 254


>emb|CAN82744.1| hypothetical protein VITISV_027510 [Vitis vinifera]
          Length = 399

 Score =  377 bits (967), Expect = e-102
 Identities = 177/257 (68%), Positives = 206/257 (80%)
 Frame = +3

Query: 144 MDRGKKPTKLLAARNRKLYMDLKDIIREHALAFLPAKSLFRCQGVCRDWKLQIATPFFAH 323
           MDRGK+P+K +   N K+YMDLKDIIRE+ L FLPAKSLFR  GVCRDWK+QI+TPFFAH
Sbjct: 43  MDRGKRPSKSIVGGNNKIYMDLKDIIREYTLPFLPAKSLFRFTGVCRDWKMQISTPFFAH 102

Query: 324 NQSLSFHGLSGLFCQTPGNPPSFISIDPKSCGVPDPPLKFLPVPVDIRTSSNGLLCCQGR 503
           NQS SFH +SGLF Q  G PPSFIS+DPK+ GVPDP LKFLPVPVDIR S NGLLCCQ R
Sbjct: 103 NQSNSFHAVSGLFYQIAGEPPSFISLDPKAYGVPDPSLKFLPVPVDIRASCNGLLCCQAR 162

Query: 504 TGDKAYYICNPVTQQWKILPEPNAIHGPEPAVVLVFEPSLLNFVAEYKLVCAFASADFDG 683
           TGDKAYY+CNP T+ WK LP+P+A HG +PA+V++FEPSLLNFVA+YKLVCAF S DFD 
Sbjct: 163 TGDKAYYMCNPATKMWKKLPKPDADHGTDPALVVIFEPSLLNFVADYKLVCAFPSTDFDD 222

Query: 684 ATEFEIYSSKEGSWRVSGEICFADKKLIPRSGVHVKGIIYWQAQSGSIVAFDLMKDRSQL 863
             EFEIYSS EG WR+S EIC  D+KL+P  GVHV GI+YWQ + G +VAFDL ++RSQL
Sbjct: 223 GYEFEIYSSAEGCWRISREICLGDRKLLPSPGVHVNGIVYWQMKHGVLVAFDLARERSQL 282

Query: 864 IQTYLGFNSSLGTMEGK 914
           I    G   +L  M+GK
Sbjct: 283 I---YGMKGALCVMQGK 296


>gb|AEI98629.1| hypothetical protein 111O18.16 [Coffea canephora]
          Length = 360

 Score =  375 bits (964), Expect = e-102
 Identities = 174/257 (67%), Positives = 207/257 (80%)
 Frame = +3

Query: 144 MDRGKKPTKLLAARNRKLYMDLKDIIREHALAFLPAKSLFRCQGVCRDWKLQIATPFFAH 323
           MDRGK+P K + A + K+YMDLKDIIREHAL +LPAKSLFR Q VCRDWKLQI++PFFAH
Sbjct: 1   MDRGKRPGKYVGATSHKIYMDLKDIIREHALQYLPAKSLFRFQSVCRDWKLQISSPFFAH 60

Query: 324 NQSLSFHGLSGLFCQTPGNPPSFISIDPKSCGVPDPPLKFLPVPVDIRTSSNGLLCCQGR 503
           NQS SF  + GLF QTPG PPSF+S D KSCGVPDP L F+P PV+I +SSNGLLCC+  
Sbjct: 61  NQSHSFRSILGLFGQTPGEPPSFLSFDAKSCGVPDPLLMFIPEPVEILSSSNGLLCCKSC 120

Query: 504 TGDKAYYICNPVTQQWKILPEPNAIHGPEPAVVLVFEPSLLNFVAEYKLVCAFASADFDG 683
           + +K YYICNPVTQQWK LP  NA HG +PA+VLVFEPSLLNF A++KL+CAF S DFD 
Sbjct: 121 SVEKVYYICNPVTQQWKKLPISNAHHGSDPAIVLVFEPSLLNFDADFKLICAFPSNDFDD 180

Query: 684 ATEFEIYSSKEGSWRVSGEICFADKKLIPRSGVHVKGIIYWQAQSGSIVAFDLMKDRSQL 863
           A EFEIYSS++GSW+ SGEICFA K L+P SG+HVK ++YW  + G ++AFDL+KDRSQL
Sbjct: 181 AIEFEIYSSRDGSWKTSGEICFASKTLVPTSGIHVKNVVYWNLKQGGVLAFDLIKDRSQL 240

Query: 864 IQTYLGFNSSLGTMEGK 914
           IQ Y G   +LG + GK
Sbjct: 241 IQGYYGAKGTLGNVNGK 257


>ref|XP_002310219.1| predicted protein [Populus trichocarpa] gi|222853122|gb|EEE90669.1|
           predicted protein [Populus trichocarpa]
          Length = 360

 Score =  350 bits (898), Expect = 3e-94
 Identities = 176/257 (68%), Positives = 201/257 (78%)
 Frame = +3

Query: 144 MDRGKKPTKLLAARNRKLYMDLKDIIREHALAFLPAKSLFRCQGVCRDWKLQIATPFFAH 323
           MDRGKK +KLLA +N K +MDL+DIIRE AL FLPAKSL RC GVCR+WKLQI+TPFFAH
Sbjct: 1   MDRGKKSSKLLANKNSKNHMDLQDIIRESALPFLPAKSLHRCTGVCREWKLQISTPFFAH 60

Query: 324 NQSLSFHGLSGLFCQTPGNPPSFISIDPKSCGVPDPPLKFLPVPVDIRTSSNGLLCCQGR 503
           NQS SF  +SG FCQ+P   PSF+S++  + GVPDP LKFLP PVDIR SSNGLLCCQGR
Sbjct: 61  NQSYSFRDVSGFFCQSPSGTPSFVSLNRMAYGVPDPSLKFLPEPVDIRCSSNGLLCCQGR 120

Query: 504 TGDKAYYICNPVTQQWKILPEPNAIHGPEPAVVLVFEPSLLNFVAEYKLVCAFASADFDG 683
           TG +AYYICNPVTQ+WK LPEP A HG +PAVVLVFEPSLLNFVAEYKLV AFAS D DG
Sbjct: 121 TGYQAYYICNPVTQKWKKLPEPTANHGTDPAVVLVFEPSLLNFVAEYKLVVAFAS-DLDG 179

Query: 684 ATEFEIYSSKEGSWRVSGEICFADKKLIPRSGVHVKGIIYWQAQSGSIVAFDLMKDRSQL 863
             EFEIYSS +G WR+S EI F   KL+PR+GVHV G++YW +  G I +FDL  +RS  
Sbjct: 180 -FEFEIYSSTDGFWRISAEISFGKMKLLPRTGVHVNGVVYWSSSMGRIFSFDLSCERSTF 238

Query: 864 IQTYLGFNSSLGTMEGK 914
           I  Y    SSLG + GK
Sbjct: 239 I--YNNGCSSLGAVNGK 253


Top