BLASTX nr result

ID: Panax21_contig00016150 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00016150
         (1018 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002882901.1| hypothetical protein ARALYDRAFT_478912 [Arab...    65   3e-08
ref|XP_003525975.1| PREDICTED: rab3 GTPase-activating protein no...    65   3e-08
ref|NP_188109.1| uncharacterized protein [Arabidopsis thaliana] ...    64   8e-08
ref|XP_003540058.1| PREDICTED: rab3 GTPase-activating protein no...    63   1e-07
ref|XP_002285458.1| PREDICTED: rab3 GTPase-activating protein no...    61   4e-07

>ref|XP_002882901.1| hypothetical protein ARALYDRAFT_478912 [Arabidopsis lyrata subsp.
           lyrata] gi|297328741|gb|EFH59160.1| hypothetical protein
           ARALYDRAFT_478912 [Arabidopsis lyrata subsp. lyrata]
          Length = 455

 Score = 65.1 bits (157), Expect = 3e-08
 Identities = 29/54 (53%), Positives = 43/54 (79%)
 Frame = -3

Query: 449 LSSQFVFLQIVYPGQILKLRVRGT*RDLKEDTSFEEVCIVLVGVIVRFNGSHIQ 288
           ++   +  Q+V+P +ILK+RVRGT +DL ++TS EE+CIVL G+I RF+GS+IQ
Sbjct: 107 VAGDLIHKQMVHPSRILKIRVRGTKKDLMQETSSEEICIVLPGIIARFDGSNIQ 160


>ref|XP_003525975.1| PREDICTED: rab3 GTPase-activating protein non-catalytic
           subunit-like [Glycine max]
          Length = 460

 Score = 64.7 bits (156), Expect = 3e-08
 Identities = 29/54 (53%), Positives = 41/54 (75%)
 Frame = -3

Query: 449 LSSQFVFLQIVYPGQILKLRVRGT*RDLKEDTSFEEVCIVLVGVIVRFNGSHIQ 288
           L  + +  Q++YP ++LKLRVRGT +DL +DTS EE C+++ GVI RF+GS IQ
Sbjct: 111 LQGELIHRQMIYPERVLKLRVRGTKKDLIQDTSSEEFCLIMSGVIARFDGSDIQ 164


>ref|NP_188109.1| uncharacterized protein [Arabidopsis thaliana]
           gi|8777474|dbj|BAA97054.1| unnamed protein product
           [Arabidopsis thaliana] gi|63147384|gb|AAY34165.1|
           At3g14910 [Arabidopsis thaliana]
           gi|115646783|gb|ABJ17116.1| At3g14910 [Arabidopsis
           thaliana] gi|332642066|gb|AEE75587.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 455

 Score = 63.5 bits (153), Expect = 8e-08
 Identities = 30/54 (55%), Positives = 42/54 (77%)
 Frame = -3

Query: 449 LSSQFVFLQIVYPGQILKLRVRGT*RDLKEDTSFEEVCIVLVGVIVRFNGSHIQ 288
           ++   +  QIV+  +ILK+RVRGT +DL ++TS EE+CIVL GVI RF+GS+IQ
Sbjct: 107 VTGDLIHKQIVHQSRILKIRVRGTKKDLMQETSSEEICIVLPGVIARFDGSNIQ 160


>ref|XP_003540058.1| PREDICTED: rab3 GTPase-activating protein non-catalytic
           subunit-like [Glycine max]
          Length = 459

 Score = 63.2 bits (152), Expect = 1e-07
 Identities = 28/54 (51%), Positives = 40/54 (74%)
 Frame = -3

Query: 449 LSSQFVFLQIVYPGQILKLRVRGT*RDLKEDTSFEEVCIVLVGVIVRFNGSHIQ 288
           L  + +  Q++YP ++LKLRVRGT +DL +DTS EE C+++ GVI  F+GS IQ
Sbjct: 110 LRGELIHRQMIYPSRVLKLRVRGTKKDLIQDTSSEEFCLIMSGVIAHFDGSDIQ 163


>ref|XP_002285458.1| PREDICTED: rab3 GTPase-activating protein non-catalytic subunit
           [Vitis vinifera] gi|302142895|emb|CBI20190.3| unnamed
           protein product [Vitis vinifera]
          Length = 457

 Score = 61.2 bits (147), Expect = 4e-07
 Identities = 28/54 (51%), Positives = 40/54 (74%)
 Frame = -3

Query: 449 LSSQFVFLQIVYPGQILKLRVRGT*RDLKEDTSFEEVCIVLVGVIVRFNGSHIQ 288
           L +  +  Q++ PG+ILK RVRGT RDL + +S EEVC+V+ GVI RF+G+ +Q
Sbjct: 110 LGADLIHKQMINPGRILKFRVRGTKRDLTQGSSSEEVCVVMPGVIARFDGADLQ 163


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