BLASTX nr result

ID: Panax21_contig00016136 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00016136
         (895 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521606.1| ISWI chromatin remodeling complex ATPase ISW...   465   e-129
ref|XP_002267239.2| PREDICTED: ATP-dependent DNA helicase DDM1-l...   455   e-126
emb|CBI17533.3| unnamed protein product [Vitis vinifera]              455   e-126
ref|XP_002310223.1| chromatin remodeling complex subunit [Populu...   449   e-124
ref|XP_004165151.1| PREDICTED: ATP-dependent DNA helicase DDM1-l...   448   e-124

>ref|XP_002521606.1| ISWI chromatin remodeling complex ATPase ISW1, putative [Ricinus
            communis] gi|223539284|gb|EEF40877.1| ISWI chromatin
            remodeling complex ATPase ISW1, putative [Ricinus
            communis]
          Length = 788

 Score =  465 bits (1197), Expect = e-129
 Identities = 233/291 (80%), Positives = 253/291 (86%), Gaps = 1/291 (0%)
 Frame = +1

Query: 7    HGMKGKLQNLMIQLRKNCNHPDLLESAFDGSCFYPPVEQIVEQCGXXXXXXXXXXXXXAR 186
            HGMKGKL NLMIQLRKNCNHPDLLESAFDGS FYPPVEQIVEQCG             A 
Sbjct: 498  HGMKGKLNNLMIQLRKNCNHPDLLESAFDGSNFYPPVEQIVEQCGKFRLLERLLNRLFAL 557

Query: 187  NHKVLIFSQWTKILDIIHYYFSETGFEVCRIDGSVRLEERRRQIQEFNDVNSNYRIFILS 366
             HKVLIFSQWTKILDI+ YYFSE G EVCRIDGSV+L+ER+RQI+EFN+V+SNYRIF+LS
Sbjct: 558  KHKVLIFSQWTKILDIMDYYFSEKGLEVCRIDGSVKLDERKRQIEEFNNVDSNYRIFLLS 617

Query: 367  TRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRIL 546
            TRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRIL
Sbjct: 618  TRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRIL 677

Query: 547  KRAFSKLKLEHVVIGKGQFKQERTKSNTAC-VEEEDILALLRDEEDAEDKMIQTDISDED 723
            KRAFSKLKLEHVVIGKGQF QER KSN+   +EEEDILALLR+EE AEDK+IQTDISDED
Sbjct: 678  KRAFSKLKLEHVVIGKGQFHQERMKSNSIVDMEEEDILALLRNEETAEDKLIQTDISDED 737

Query: 724  LERVLDRSDLVAGKEIDGKPQFLASVLPLKGPGWEVVIPTATGGMLNTVNN 876
            LER+LDRSDLV     D +   +   +PLKGPGWEVVIPTATGGML+T+++
Sbjct: 738  LERILDRSDLVGNLADDKENDAVMDAIPLKGPGWEVVIPTATGGMLSTLSS 788


>ref|XP_002267239.2| PREDICTED: ATP-dependent DNA helicase DDM1-like [Vitis vinifera]
          Length = 759

 Score =  455 bits (1170), Expect = e-126
 Identities = 221/290 (76%), Positives = 249/290 (85%), Gaps = 1/290 (0%)
 Frame = +1

Query: 10   GMKGKLQNLMIQLRKNCNHPDLLESAFDGSCFYPPVEQIVEQCGXXXXXXXXXXXXXARN 189
            G+KGKL NLM+QLRKNCNHPDLLESAFDGS  YPPVEQIVEQCG             AR 
Sbjct: 470  GVKGKLNNLMVQLRKNCNHPDLLESAFDGSYLYPPVEQIVEQCGKFRLLDRLLARLFARK 529

Query: 190  HKVLIFSQWTKILDIIHYYFSETGFEVCRIDGSVRLEERRRQIQEFNDVNSNYRIFILST 369
            HKVLIFSQWTKILDI+ YYFSE G EVCRIDGSVRL+ER+RQI+EFND+NSN R+F+LST
Sbjct: 530  HKVLIFSQWTKILDIMEYYFSEKGLEVCRIDGSVRLDERKRQIEEFNDMNSNCRVFLLST 589

Query: 370  RAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRILK 549
            RAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQS+EGR+LK
Sbjct: 590  RAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSIEGRMLK 649

Query: 550  RAFSKLKLEHVVIGKGQFKQERTKSNTACVEEEDILALLRDEEDAEDKMIQTDISDEDLE 729
            RAFSKLKLEHVVIGKGQF+QER K N   +EEED+L LL+D+ED+EDK+IQTDIS+EDL+
Sbjct: 650  RAFSKLKLEHVVIGKGQFQQERIKPNMDVLEEEDLLQLLQDQEDSEDKLIQTDISEEDLD 709

Query: 730  RVLDRSDLVAG-KEIDGKPQFLASVLPLKGPGWEVVIPTATGGMLNTVNN 876
            R+LDRSDL+      DG+    A   PLKGPGWEV+ PTA+GGML+T+N+
Sbjct: 710  RILDRSDLIGDTSNDDGRSNSAADAFPLKGPGWEVMTPTASGGMLSTLNS 759


>emb|CBI17533.3| unnamed protein product [Vitis vinifera]
          Length = 800

 Score =  455 bits (1170), Expect = e-126
 Identities = 221/290 (76%), Positives = 249/290 (85%), Gaps = 1/290 (0%)
 Frame = +1

Query: 10   GMKGKLQNLMIQLRKNCNHPDLLESAFDGSCFYPPVEQIVEQCGXXXXXXXXXXXXXARN 189
            G+KGKL NLM+QLRKNCNHPDLLESAFDGS  YPPVEQIVEQCG             AR 
Sbjct: 511  GVKGKLNNLMVQLRKNCNHPDLLESAFDGSYLYPPVEQIVEQCGKFRLLDRLLARLFARK 570

Query: 190  HKVLIFSQWTKILDIIHYYFSETGFEVCRIDGSVRLEERRRQIQEFNDVNSNYRIFILST 369
            HKVLIFSQWTKILDI+ YYFSE G EVCRIDGSVRL+ER+RQI+EFND+NSN R+F+LST
Sbjct: 571  HKVLIFSQWTKILDIMEYYFSEKGLEVCRIDGSVRLDERKRQIEEFNDMNSNCRVFLLST 630

Query: 370  RAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRILK 549
            RAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQS+EGR+LK
Sbjct: 631  RAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSIEGRMLK 690

Query: 550  RAFSKLKLEHVVIGKGQFKQERTKSNTACVEEEDILALLRDEEDAEDKMIQTDISDEDLE 729
            RAFSKLKLEHVVIGKGQF+QER K N   +EEED+L LL+D+ED+EDK+IQTDIS+EDL+
Sbjct: 691  RAFSKLKLEHVVIGKGQFQQERIKPNMDVLEEEDLLQLLQDQEDSEDKLIQTDISEEDLD 750

Query: 730  RVLDRSDLVAG-KEIDGKPQFLASVLPLKGPGWEVVIPTATGGMLNTVNN 876
            R+LDRSDL+      DG+    A   PLKGPGWEV+ PTA+GGML+T+N+
Sbjct: 751  RILDRSDLIGDTSNDDGRSNSAADAFPLKGPGWEVMTPTASGGMLSTLNS 800


>ref|XP_002310223.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222853126|gb|EEE90673.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 754

 Score =  449 bits (1155), Expect = e-124
 Identities = 225/289 (77%), Positives = 244/289 (84%), Gaps = 2/289 (0%)
 Frame = +1

Query: 10   GMKGKLQNLMIQLRKNCNHPDLLESAFDGSCFYPPVEQIVEQCGXXXXXXXXXXXXXARN 189
            GMKG+L NLM+QLRKNC HPDLLESAFDGS FYPPVEQIVEQCG             A  
Sbjct: 464  GMKGRLTNLMVQLRKNCYHPDLLESAFDGSYFYPPVEQIVEQCGKFRLLDKLLNRLFALK 523

Query: 190  HKVLIFSQWTKILDIIHYYFSETGFEVCRIDGSVRLEERRRQIQEFNDVNSNYRIFILST 369
            HKVLIFSQWTK+LDI+ YYFSE GFEVCRIDGSV L+ER+RQI+EFND NS YR+F+LST
Sbjct: 524  HKVLIFSQWTKVLDIMDYYFSEKGFEVCRIDGSVNLDERKRQIEEFNDENSQYRVFLLST 583

Query: 370  RAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRILK 549
            RAGGLGINLT+ADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQS+EGRILK
Sbjct: 584  RAGGLGINLTSADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSIEGRILK 643

Query: 550  RAFSKLKLEHVVIGKGQFKQERTKS-NTACVEEEDILALLRDEEDAEDKMIQTDISDEDL 726
            RAFSKLKLEHVVIGKGQF  E+TKS  T  +EE+DILALLRDEE AEDK+IQTDISDEDL
Sbjct: 644  RAFSKLKLEHVVIGKGQFHLEQTKSKGTEVMEEDDILALLRDEETAEDKLIQTDISDEDL 703

Query: 727  ERVLDRSDLVAGKEIDGKPQFLAS-VLPLKGPGWEVVIPTATGGMLNTV 870
            ER+LDRSDLV G   D      A+   PLKGPGWEVVIP A GGML+T+
Sbjct: 704  ERILDRSDLVVGSSDDDTESIAATGSFPLKGPGWEVVIPNANGGMLSTL 752


>ref|XP_004165151.1| PREDICTED: ATP-dependent DNA helicase DDM1-like [Cucumis sativus]
          Length = 828

 Score =  448 bits (1152), Expect = e-124
 Identities = 225/291 (77%), Positives = 246/291 (84%), Gaps = 2/291 (0%)
 Frame = +1

Query: 10   GMKGKLQNLMIQLRKNCNHPDLLESAFDGSCFYPPVEQIVEQCGXXXXXXXXXXXXXARN 189
            G KGKL NLM+QLRKNCNHPDLLES FD S  YPPVEQ+VEQCG              R 
Sbjct: 538  GFKGKLNNLMVQLRKNCNHPDLLESVFDDSYAYPPVEQLVEQCGKFRLLDRLLTRLFERK 597

Query: 190  HKVLIFSQWTKILDIIHYYFSETGFEVCRIDGSVRLEERRRQIQEFNDVNSNYRIFILST 369
            HKVLIFSQWTKILDI+ YYFSE GFEVCRIDGSV+L+ER+RQIQEFNDVNSNYRIFILST
Sbjct: 598  HKVLIFSQWTKILDIMDYYFSEKGFEVCRIDGSVKLDERKRQIQEFNDVNSNYRIFILST 657

Query: 370  RAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRILK 549
            RAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQ+KPVHVYRLATAQS+EGRILK
Sbjct: 658  RAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQSKPVHVYRLATAQSIEGRILK 717

Query: 550  RAFSKLKLEHVVIGKGQFKQERTKSNTA-CVEEEDILALLRDEEDAEDKMIQTDISDEDL 726
            RAFSKLKLEHVVI KGQF QERTK   A  VEEEDILALLR+E+ AEDKMIQT+ISD DL
Sbjct: 718  RAFSKLKLEHVVIEKGQFHQERTKPTAADIVEEEDILALLREEDSAEDKMIQTEISDADL 777

Query: 727  ERVLDRSDLVAGKEIDG-KPQFLASVLPLKGPGWEVVIPTATGGMLNTVNN 876
            ER+LDRSDL+     D  K +   ++ PLKGPGWEVVIP +TGG+L+T+N+
Sbjct: 778  ERILDRSDLIVPTGSDNEKSKVSGNLYPLKGPGWEVVIPASTGGVLSTLNS 828


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