BLASTX nr result

ID: Panax21_contig00016132 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00016132
         (546 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277519.1| PREDICTED: F-box protein SKIP1 [Vitis vinifera]   281   4e-74
ref|XP_003519156.1| PREDICTED: F-box protein SKIP1-like isoform ...   273   1e-71
ref|XP_003610294.1| F-box protein SKIP1 [Medicago truncatula] gi...   272   3e-71
gb|ACJ84674.1| unknown [Medicago truncatula] gi|388515861|gb|AFK...   270   8e-71
ref|XP_002325124.1| f-box family protein [Populus trichocarpa] g...   270   1e-70

>ref|XP_002277519.1| PREDICTED: F-box protein SKIP1 [Vitis vinifera]
          Length = 308

 Score =  281 bits (720), Expect = 4e-74
 Identities = 131/180 (72%), Positives = 149/180 (82%)
 Frame = +3

Query: 6   LNTVFDLEPQFDSATESPRWWDPSFETKIDTMLRSAVNWSDGSLTEIRVRHCSDRSLRLV 185
           L +  DLE  FDS TES RWW P FE KID MLRS   WS GS+TEIRVRHCSDRSL   
Sbjct: 56  LFSTLDLEVHFDSPTESARWWTPEFERKIDAMLRSIAEWSGGSITEIRVRHCSDRSLSFA 115

Query: 186 AERCPNIQVLSIKSCPNVTDESMTKIASGCPKLKELDISYCYEVSYKSLALLGSNCPNLR 365
           A+RC N++VLSIKSCPNVTD SM ++A  C KL+E+DISYCYE+S++SL LLG NCPNL+
Sbjct: 116 ADRCSNLEVLSIKSCPNVTDASMARVAFRCLKLREVDISYCYEISHESLILLGRNCPNLK 175

Query: 366 ILKRNLMNWLDPSQHVGIVPNEYLKACPQDGDSEAAVIGKLMPQILHLEIRFSKLSARGL 545
           ILKRNLMNWLDPSQH+GIVPNEYL ACPQDGDSEAA IGK MP + HLE+RFSK+SA+GL
Sbjct: 176 ILKRNLMNWLDPSQHIGIVPNEYLNACPQDGDSEAAAIGKTMPHLEHLELRFSKISAKGL 235


>ref|XP_003519156.1| PREDICTED: F-box protein SKIP1-like isoform 1 [Glycine max]
          Length = 306

 Score =  273 bits (698), Expect = 1e-71
 Identities = 124/180 (68%), Positives = 150/180 (83%)
 Frame = +3

Query: 6   LNTVFDLEPQFDSATESPRWWDPSFETKIDTMLRSAVNWSDGSLTEIRVRHCSDRSLRLV 185
           L+ VF+L+PQFDS TES RWW P FE KID MLRS V W+  SLT IR+RHCSDRSL LV
Sbjct: 54  LHFVFNLDPQFDSPTESTRWWTPEFEAKIDNMLRSVVEWAQSSLTHIRIRHCSDRSLALV 113

Query: 186 AERCPNIQVLSIKSCPNVTDESMTKIASGCPKLKELDISYCYEVSYKSLALLGSNCPNLR 365
           A+ CPN++VL I+SCP VTD+S+++IA  CPKL+ELDISYCYE++++SL L+G NCPNL+
Sbjct: 114 AQSCPNLEVLFIRSCPRVTDDSISRIALSCPKLRELDISYCYEITHESLVLIGRNCPNLK 173

Query: 366 ILKRNLMNWLDPSQHVGIVPNEYLKACPQDGDSEAAVIGKLMPQILHLEIRFSKLSARGL 545
           +LKRNLMNWLDPSQH GIVP++YL ACPQDGD EAA I   MP +  LEIRFSKL+A+GL
Sbjct: 174 VLKRNLMNWLDPSQHRGIVPDDYLNACPQDGDDEAAAIANSMPGLEQLEIRFSKLTAKGL 233


>ref|XP_003610294.1| F-box protein SKIP1 [Medicago truncatula]
           gi|355511349|gb|AES92491.1| F-box protein SKIP1
           [Medicago truncatula]
          Length = 302

 Score =  272 bits (695), Expect = 3e-71
 Identities = 123/180 (68%), Positives = 154/180 (85%)
 Frame = +3

Query: 6   LNTVFDLEPQFDSATESPRWWDPSFETKIDTMLRSAVNWSDGSLTEIRVRHCSDRSLRLV 185
           L++VF+L+P FD   ESPRWW   FE++ID+MLRS V W+   LT+IR+RHCSDRSL LV
Sbjct: 50  LHSVFNLDPYFDKPLESPRWWTLQFESQIDSMLRSIVQWTHIFLTQIRIRHCSDRSLALV 109

Query: 186 AERCPNIQVLSIKSCPNVTDESMTKIASGCPKLKELDISYCYEVSYKSLALLGSNCPNLR 365
           A+RCPN++VLSI+SCP VTD+SM+KIA+GCP L+ELDISYCYE++++SL L+G NC N++
Sbjct: 110 AQRCPNLEVLSIRSCPRVTDDSMSKIATGCPNLRELDISYCYEITHESLVLIGRNCSNIK 169

Query: 366 ILKRNLMNWLDPSQHVGIVPNEYLKACPQDGDSEAAVIGKLMPQILHLEIRFSKLSARGL 545
           +LKRNLMNWLDPSQHVGIVP++YL ACPQDGDSEAA I   MP +  LEIRFSKL+A+GL
Sbjct: 170 VLKRNLMNWLDPSQHVGIVPDDYLNACPQDGDSEAAAIANSMPHLEGLEIRFSKLTAKGL 229


>gb|ACJ84674.1| unknown [Medicago truncatula] gi|388515861|gb|AFK45992.1| unknown
           [Medicago truncatula]
          Length = 302

 Score =  270 bits (691), Expect = 8e-71
 Identities = 122/180 (67%), Positives = 153/180 (85%)
 Frame = +3

Query: 6   LNTVFDLEPQFDSATESPRWWDPSFETKIDTMLRSAVNWSDGSLTEIRVRHCSDRSLRLV 185
           L++VF+L+P FD   ESPRWW   FE++ID+MLRS V W+   LT+IR+RHCSDRSL LV
Sbjct: 50  LHSVFNLDPYFDKPLESPRWWTLQFESQIDSMLRSIVQWTHIFLTQIRIRHCSDRSLALV 109

Query: 186 AERCPNIQVLSIKSCPNVTDESMTKIASGCPKLKELDISYCYEVSYKSLALLGSNCPNLR 365
           A+RCPN++VLSI+SCP VTD+SM+KIA+GCP L+ELDISYCYE++++SL L+G NC N++
Sbjct: 110 AQRCPNLEVLSIRSCPRVTDDSMSKIATGCPNLRELDISYCYEITHESLVLIGRNCSNIK 169

Query: 366 ILKRNLMNWLDPSQHVGIVPNEYLKACPQDGDSEAAVIGKLMPQILHLEIRFSKLSARGL 545
           +LKRNLMNWLDPSQHVGIVP++YL ACPQDGDSEA  I   MP +  LEIRFSKL+A+GL
Sbjct: 170 VLKRNLMNWLDPSQHVGIVPDDYLNACPQDGDSEAVAIANSMPHLEGLEIRFSKLTAKGL 229


>ref|XP_002325124.1| f-box family protein [Populus trichocarpa]
           gi|222866558|gb|EEF03689.1| f-box family protein
           [Populus trichocarpa]
          Length = 314

 Score =  270 bits (689), Expect = 1e-70
 Identities = 124/180 (68%), Positives = 147/180 (81%)
 Frame = +3

Query: 6   LNTVFDLEPQFDSATESPRWWDPSFETKIDTMLRSAVNWSDGSLTEIRVRHCSDRSLRLV 185
           LNT+FDL+ QFDS  ESPRWW P FE KID+ML S + +SDGSLTEIR +HCSD S+   
Sbjct: 62  LNTLFDLDTQFDSVIESPRWWTPDFERKIDSMLVSVITFSDGSLTEIRTQHCSDLSVTFA 121

Query: 186 AERCPNIQVLSIKSCPNVTDESMTKIASGCPKLKELDISYCYEVSYKSLALLGSNCPNLR 365
           AERC N+QVLSIKSC NVTD SM +IA  C KLKELDISYC+E+S++SL ++G NCPNLR
Sbjct: 122 AERCSNLQVLSIKSCRNVTDASMAQIAYKCAKLKELDISYCFEISHESLVMMGRNCPNLR 181

Query: 366 ILKRNLMNWLDPSQHVGIVPNEYLKACPQDGDSEAAVIGKLMPQILHLEIRFSKLSARGL 545
           +LKRN MNWLD S+HVGIVP+ YL  CPQDGD EA  IGK MP ++HLE+RFSK+SA+GL
Sbjct: 182 VLKRNQMNWLDASEHVGIVPDSYLNTCPQDGDCEAGAIGKYMPNLVHLELRFSKMSAKGL 241


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