BLASTX nr result

ID: Panax21_contig00016127 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00016127
         (527 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280741.1| PREDICTED: nuclear transcription factor Y su...   234   4e-60
dbj|BAG16521.1| putative CONSTANS interacting protein 2b [Capsic...   229   2e-58
gb|ABB17001.1| unknown [Solanum tuberosum]                            223   1e-56
ref|XP_002311837.1| predicted protein [Populus trichocarpa] gi|2...   219   2e-55
ref|XP_002319851.1| predicted protein [Populus trichocarpa] gi|2...   214   8e-54

>ref|XP_002280741.1| PREDICTED: nuclear transcription factor Y subunit C-9-like [Vitis
           vinifera]
          Length = 262

 Score =  234 bits (598), Expect = 4e-60
 Identities = 126/175 (72%), Positives = 134/175 (76%), Gaps = 1/175 (0%)
 Frame = -2

Query: 523 MDQQGHGPPQGMGVVGSSAQMQQYGVPPYQANQMMGPSPPASAGSIQSP-QTAGLPSSPX 347
           MDQ GHG P  MG+VGS+AQM  YG+PP+Q NQM+G S P + GSIQSP Q AG+ SSP 
Sbjct: 1   MDQPGHGQPPAMGMVGSAAQMP-YGIPPFQPNQMVGTSGPGTVGSIQSPTQPAGI-SSPA 58

Query: 346 XXXXXXXXXXXXXXXXXXXXXXXXQNFWASQYQEIEQVTDFKNHSLPLARIKKIMKADED 167
                                   QNFW +QYQEIEQ TDFKNHSLPLARIKKIMKADED
Sbjct: 59  QLAQHQLAYQHIHQQQQQQLQQQLQNFWQNQYQEIEQTTDFKNHSLPLARIKKIMKADED 118

Query: 166 VRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFD 2
           VRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFD
Sbjct: 119 VRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFD 173


>dbj|BAG16521.1| putative CONSTANS interacting protein 2b [Capsicum chinense]
          Length = 258

 Score =  229 bits (584), Expect = 2e-58
 Identities = 124/175 (70%), Positives = 134/175 (76%), Gaps = 1/175 (0%)
 Frame = -2

Query: 523 MDQQGHGPPQGMGVVGSSAQMQQYGVPPYQANQMMGPSPPA-SAGSIQSPQTAGLPSSPX 347
           MD  G+G P G+GV+ SSA +  YG P YQANQM GPSPPA SAG+IQSPQ AGL +S  
Sbjct: 1   MDHHGNGQPPGIGVITSSAPV--YGAP-YQANQMAGPSPPAVSAGAIQSPQAAGLSASSA 57

Query: 346 XXXXXXXXXXXXXXXXXXXXXXXXQNFWASQYQEIEQVTDFKNHSLPLARIKKIMKADED 167
                                   Q+FWA+QYQEIE VTDFKNHSLPLARIKKIMKADED
Sbjct: 58  QMAQHQLAYQQIHQQQQQQLQQQLQSFWANQYQEIEHVTDFKNHSLPLARIKKIMKADED 117

Query: 166 VRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFD 2
           VRMISAEAPV+FARACEMFILELTLR+WNHTEENKRRTLQKNDIAAAITRTDIFD
Sbjct: 118 VRMISAEAPVVFARACEMFILELTLRAWNHTEENKRRTLQKNDIAAAITRTDIFD 172


>gb|ABB17001.1| unknown [Solanum tuberosum]
          Length = 256

 Score =  223 bits (568), Expect = 1e-56
 Identities = 122/174 (70%), Positives = 130/174 (74%)
 Frame = -2

Query: 523 MDQQGHGPPQGMGVVGSSAQMQQYGVPPYQANQMMGPSPPASAGSIQSPQTAGLPSSPXX 344
           MD  G+G P G+GVV SSA +  YG P YQANQM GP P  SAG+IQSPQ AGL +S   
Sbjct: 1   MDHHGNGQPPGIGVVTSSAPI--YGAP-YQANQMAGP-PAVSAGAIQSPQAAGLSASSAQ 56

Query: 343 XXXXXXXXXXXXXXXXXXXXXXXQNFWASQYQEIEQVTDFKNHSLPLARIKKIMKADEDV 164
                                  Q FWA+QYQEIE VTDFKNHSLPLARIKKIMKADEDV
Sbjct: 57  MAQHQLAYQHIHQQQQQQLQQQLQTFWANQYQEIEHVTDFKNHSLPLARIKKIMKADEDV 116

Query: 163 RMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFD 2
           RMISAEAPV+FARACEMFILELTLR+WNHTEENKRRTLQKNDIAAAITRTDIFD
Sbjct: 117 RMISAEAPVVFARACEMFILELTLRAWNHTEENKRRTLQKNDIAAAITRTDIFD 170


>ref|XP_002311837.1| predicted protein [Populus trichocarpa] gi|222851657|gb|EEE89204.1|
           predicted protein [Populus trichocarpa]
          Length = 258

 Score =  219 bits (558), Expect = 2e-55
 Identities = 120/175 (68%), Positives = 130/175 (74%), Gaps = 1/175 (0%)
 Frame = -2

Query: 523 MDQQGHGPPQGMGVVGSSAQMQQYGVPPYQANQMMGPSPPASAGSIQSP-QTAGLPSSPX 347
           MDQQGH  P  +G+VGS+A +  YG+P YQ NQMMGPS   + GS+QSP Q A L +S  
Sbjct: 1   MDQQGHVQPPAVGMVGSTAPVP-YGIPSYQHNQMMGPS---ATGSLQSPTQPAVLTASSA 56

Query: 346 XXXXXXXXXXXXXXXXXXXXXXXXQNFWASQYQEIEQVTDFKNHSLPLARIKKIMKADED 167
                                   Q FWA+QYQEIEQ TDFKNHSLPLARIKKIMKADED
Sbjct: 57  HLAQHQLAYQHIHHQQQQQLQQQLQTFWANQYQEIEQTTDFKNHSLPLARIKKIMKADED 116

Query: 166 VRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFD 2
           VRMISAEAP+IFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFD
Sbjct: 117 VRMISAEAPIIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFD 171


>ref|XP_002319851.1| predicted protein [Populus trichocarpa] gi|222858227|gb|EEE95774.1|
           predicted protein [Populus trichocarpa]
          Length = 258

 Score =  214 bits (544), Expect = 8e-54
 Identities = 117/175 (66%), Positives = 128/175 (73%), Gaps = 1/175 (0%)
 Frame = -2

Query: 523 MDQQGHGPPQGMGVVGSSAQMQQYGVPPYQANQMMGPSPPASAGSIQSP-QTAGLPSSPX 347
           MDQQGHG P  +G++G +A +  YG+  YQ NQMMGPS   + GS+QSP Q A L ++  
Sbjct: 1   MDQQGHGQPPTVGMIGRTAPVP-YGMASYQPNQMMGPS---ATGSVQSPTQPAVLAAASA 56

Query: 346 XXXXXXXXXXXXXXXXXXXXXXXXQNFWASQYQEIEQVTDFKNHSLPLARIKKIMKADED 167
                                   Q FWA+QYQEIEQ  DFKNHSLPLARIKKIMKADED
Sbjct: 57  QLAQHQLAYQHIHQQQQQQLQQQLQTFWANQYQEIEQTADFKNHSLPLARIKKIMKADED 116

Query: 166 VRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFD 2
           VRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFD
Sbjct: 117 VRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFD 171


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