BLASTX nr result

ID: Panax21_contig00016122 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00016122
         (1501 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263798.1| PREDICTED: KH domain-containing protein At1g...   369   1e-99
ref|XP_002526434.1| nucleic acid binding protein, putative [Rici...   362   1e-97
ref|XP_002331132.1| predicted protein [Populus trichocarpa] gi|1...   358   2e-96
ref|XP_002328717.1| predicted protein [Populus trichocarpa] gi|2...   346   1e-92
ref|XP_004133720.1| PREDICTED: KH domain-containing protein At1g...   338   2e-90

>ref|XP_002263798.1| PREDICTED: KH domain-containing protein At1g09660 [Vitis vinifera]
            gi|297739511|emb|CBI29693.3| unnamed protein product
            [Vitis vinifera]
          Length = 295

 Score =  369 bits (947), Expect = 1e-99
 Identities = 182/255 (71%), Positives = 210/255 (82%)
 Frame = +2

Query: 368  AERQKLAPFMQVMPVCSRLLSQEIMRTSGFVSNQSFMDHERMGPERPYRPLGQQPNGGPM 547
            AE+QKL PFMQ++P CSRLL+QEI R S    NQ F+D ER+  + P+R LGQ PNGGPM
Sbjct: 41   AEKQKLGPFMQILPQCSRLLNQEIRRLSAIAPNQGFVDLERIEHDSPFRSLGQHPNGGPM 100

Query: 548  DAETWSSMQSEENGLLQRMAPVQPSAMGWPAAALGLTTTPVVKRVIRLDVPLDKFPNFNF 727
            D E W +MQ+EENG L+RMAP Q S++GW  A  G+ TTPVVKRVIRLDVP+DK+PN+NF
Sbjct: 101  DLEGWPAMQTEENGPLRRMAPFQASSLGWHRAP-GIPTTPVVKRVIRLDVPVDKYPNYNF 159

Query: 728  VGRILGPRGNSLKRIEAMTECRIFIRGRGSVKDSMKEEKLKDKPGYEHLNEPLHLLVEAE 907
            VGRILGPRGNSLKR+EAMTECR++IRG+GSVKD++KEEKLKDKPGYEHLNEPLH+LVEAE
Sbjct: 160  VGRILGPRGNSLKRVEAMTECRVYIRGQGSVKDAVKEEKLKDKPGYEHLNEPLHVLVEAE 219

Query: 908  FPEDMIDSRLEHAVALLENLLKPVDESMDVYKKQQLRELAMLNGTLREEXXXXXXXXXXX 1087
            F ED+I+SRLE AVA+LENLLKPVDES+D YKKQQLRELAMLNGTLREE           
Sbjct: 220  FSEDIINSRLEQAVAILENLLKPVDESLDQYKKQQLRELAMLNGTLREESPSMSPSMSPS 279

Query: 1088 XXXFNNGGMKRAKTG 1132
               FN  GMKRAKTG
Sbjct: 280  MSPFNTAGMKRAKTG 294


>ref|XP_002526434.1| nucleic acid binding protein, putative [Ricinus communis]
            gi|223534214|gb|EEF35929.1| nucleic acid binding protein,
            putative [Ricinus communis]
          Length = 295

 Score =  362 bits (930), Expect = 1e-97
 Identities = 178/254 (70%), Positives = 207/254 (81%)
 Frame = +2

Query: 368  AERQKLAPFMQVMPVCSRLLSQEIMRTSGFVSNQSFMDHERMGPERPYRPLGQQPNGGPM 547
            AERQKL PF+QV+P+CSRLL+QEI R SGF   Q F+DHER   E PYR LGQQ NG PM
Sbjct: 43   AERQKLVPFIQVLPLCSRLLNQEIRRVSGFT--QGFVDHERYEHESPYRSLGQQTNGRPM 100

Query: 548  DAETWSSMQSEENGLLQRMAPVQPSAMGWPAAALGLTTTPVVKRVIRLDVPLDKFPNFNF 727
            D E W  M +EENG LQRMA  Q ++MGWP    G+ TTPV+K+VIRLDVP+D +P++NF
Sbjct: 101  DLEAWPRMPTEENGHLQRMASFQAASMGWPGVP-GIPTTPVIKKVIRLDVPVDDYPSYNF 159

Query: 728  VGRILGPRGNSLKRIEAMTECRIFIRGRGSVKDSMKEEKLKDKPGYEHLNEPLHLLVEAE 907
            VGRILGPRGNSLKR+EAMTECR++IRG+GSVKDS+KEEKLKDKPGYEHLNEPLH+LVEAE
Sbjct: 160  VGRILGPRGNSLKRVEAMTECRVYIRGKGSVKDSVKEEKLKDKPGYEHLNEPLHVLVEAE 219

Query: 908  FPEDMIDSRLEHAVALLENLLKPVDESMDVYKKQQLRELAMLNGTLREEXXXXXXXXXXX 1087
            FPED++D+R+EHAV +L++LLKPVDES+D YKKQQLRELAMLNGTLREE           
Sbjct: 220  FPEDIVDARVEHAVTILQSLLKPVDESLDHYKKQQLRELAMLNGTLREESPSMSPSMSPS 279

Query: 1088 XXXFNNGGMKRAKT 1129
               FN  GMKRAKT
Sbjct: 280  MSPFNTAGMKRAKT 293


>ref|XP_002331132.1| predicted protein [Populus trichocarpa] gi|118487494|gb|ABK95574.1|
            unknown [Populus trichocarpa] gi|222872860|gb|EEF09991.1|
            predicted protein [Populus trichocarpa]
          Length = 294

 Score =  358 bits (919), Expect = 2e-96
 Identities = 174/255 (68%), Positives = 207/255 (81%)
 Frame = +2

Query: 368  AERQKLAPFMQVMPVCSRLLSQEIMRTSGFVSNQSFMDHERMGPERPYRPLGQQPNGGPM 547
            AE+ KL PF+QV+P+C RLL QEI R S +  NQ F+DHER   E P+R LGQ PNG PM
Sbjct: 42   AEKHKLGPFVQVLPICCRLLYQEIRRASAY--NQGFVDHERYEHESPFRSLGQHPNGRPM 99

Query: 548  DAETWSSMQSEENGLLQRMAPVQPSAMGWPAAALGLTTTPVVKRVIRLDVPLDKFPNFNF 727
            D E WS+M  EENG LQRMA +  ++MGWP    G+++TPVVKRVIRLDVP+DK+PN+NF
Sbjct: 100  DLEGWSAMPKEENGHLQRMASLPAASMGWPGVP-GISSTPVVKRVIRLDVPVDKYPNYNF 158

Query: 728  VGRILGPRGNSLKRIEAMTECRIFIRGRGSVKDSMKEEKLKDKPGYEHLNEPLHLLVEAE 907
            VGRILGPRGNSLKR+EA+TECR++IRG+GSVKDS+KEEKLKDKPGYEHLNEPLH+LVEAE
Sbjct: 159  VGRILGPRGNSLKRVEALTECRVYIRGKGSVKDSLKEEKLKDKPGYEHLNEPLHVLVEAE 218

Query: 908  FPEDMIDSRLEHAVALLENLLKPVDESMDVYKKQQLRELAMLNGTLREEXXXXXXXXXXX 1087
            FPED++++RL+HA+ +LE+LLKPVDES D YKKQQLRELA+LNGTLREE           
Sbjct: 219  FPEDIMNARLDHAITILESLLKPVDESFDNYKKQQLRELALLNGTLREESPSMSPSMSPS 278

Query: 1088 XXXFNNGGMKRAKTG 1132
               FN  GMKRAKTG
Sbjct: 279  MSPFNTAGMKRAKTG 293


>ref|XP_002328717.1| predicted protein [Populus trichocarpa] gi|222839015|gb|EEE77366.1|
            predicted protein [Populus trichocarpa]
          Length = 294

 Score =  346 bits (887), Expect = 1e-92
 Identities = 171/255 (67%), Positives = 202/255 (79%)
 Frame = +2

Query: 368  AERQKLAPFMQVMPVCSRLLSQEIMRTSGFVSNQSFMDHERMGPERPYRPLGQQPNGGPM 547
            AE+ KL PF+QV+P C RLL+QEI R S    NQ  +DHER   E P+R LGQ  NG  M
Sbjct: 42   AEKHKLGPFVQVLPNCCRLLNQEIRRASA--CNQGLVDHERYEHESPFRSLGQHSNGRTM 99

Query: 548  DAETWSSMQSEENGLLQRMAPVQPSAMGWPAAALGLTTTPVVKRVIRLDVPLDKFPNFNF 727
            D E WS+M +EENG LQRMA    ++MGWP    G+  TPVVKRVIRLDVP+DK+P++NF
Sbjct: 100  DLEAWSAMPTEENGHLQRMASFPAASMGWPGVP-GIPITPVVKRVIRLDVPVDKYPSYNF 158

Query: 728  VGRILGPRGNSLKRIEAMTECRIFIRGRGSVKDSMKEEKLKDKPGYEHLNEPLHLLVEAE 907
            VGRILGPRGNSLKR+EA+T+CR++IRG+GSVKDS+KEEKLKDKPGYEHLNEPLH+LVEAE
Sbjct: 159  VGRILGPRGNSLKRVEALTDCRVYIRGKGSVKDSLKEEKLKDKPGYEHLNEPLHVLVEAE 218

Query: 908  FPEDMIDSRLEHAVALLENLLKPVDESMDVYKKQQLRELAMLNGTLREEXXXXXXXXXXX 1087
            FPED+I++RLEHA+ +LE+LLKPVDES+D YKKQQLRELA+LNGTLREE           
Sbjct: 219  FPEDIINARLEHAITILESLLKPVDESLDHYKKQQLRELALLNGTLREESPSMSPSMSPS 278

Query: 1088 XXXFNNGGMKRAKTG 1132
               FN  GMKRAKTG
Sbjct: 279  MSPFNTAGMKRAKTG 293


>ref|XP_004133720.1| PREDICTED: KH domain-containing protein At1g09660-like [Cucumis
            sativus] gi|449478123|ref|XP_004155228.1| PREDICTED: KH
            domain-containing protein At1g09660-like [Cucumis
            sativus]
          Length = 289

 Score =  338 bits (867), Expect = 2e-90
 Identities = 168/255 (65%), Positives = 203/255 (79%)
 Frame = +2

Query: 368  AERQKLAPFMQVMPVCSRLLSQEIMRTSGFVSNQSFMDHERMGPERPYRPLGQQPNGGPM 547
            +ERQKL PF+QV+P CSRLL+QEI R SG   NQ+ +DHER     PYR LGQ  NG PM
Sbjct: 41   SERQKLGPFVQVLPHCSRLLNQEIRRLSGL--NQTSVDHERFEHGSPYRSLGQLSNGRPM 98

Query: 548  DAETWSSMQSEENGLLQRMAPVQPSAMGWPAAALGLTTTPVVKRVIRLDVPLDKFPNFNF 727
            D E W  MQ E +G +  M P+Q  +MGWP    G+ TTP+VKRV+RLDVP+DK+PN+NF
Sbjct: 99   DMEGWPPMQMEGSGHVHGMGPLQAHSMGWPRVQ-GIPTTPIVKRVVRLDVPVDKYPNYNF 157

Query: 728  VGRILGPRGNSLKRIEAMTECRIFIRGRGSVKDSMKEEKLKDKPGYEHLNEPLHLLVEAE 907
            VGR+LGPRGNSLKR+EA+TECR++IRG+GS+KD+++EEKLKDKPGYEHLNEPLHLLVEAE
Sbjct: 158  VGRLLGPRGNSLKRVEALTECRVYIRGKGSIKDALEEEKLKDKPGYEHLNEPLHLLVEAE 217

Query: 908  FPEDMIDSRLEHAVALLENLLKPVDESMDVYKKQQLRELAMLNGTLREEXXXXXXXXXXX 1087
            FPED I++RL+HAVA+LE+LLKPVDE +D YKKQQLRELA+LNGTLREE           
Sbjct: 218  FPEDTINARLDHAVAVLESLLKPVDELLDQYKKQQLRELALLNGTLREE----SPSMSPS 273

Query: 1088 XXXFNNGGMKRAKTG 1132
               FN+ G+KRAKTG
Sbjct: 274  MSPFNSTGLKRAKTG 288


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