BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00016117
         (1132 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524427.1| Plastid-specific 30S ribosomal protein 1, ch...   392   e-106
ref|XP_003634154.1| PREDICTED: 30S ribosomal protein 1, chloropl...   382   e-104
emb|CBI23087.3| unnamed protein product [Vitis vinifera]              379   e-103
ref|XP_002317839.1| predicted protein [Populus trichocarpa] gi|2...   377   e-102
ref|XP_004147328.1| PREDICTED: ribosome-binding factor PSRP1, ch...   373   e-101

>ref|XP_002524427.1| Plastid-specific 30S ribosomal protein 1, chloroplast precursor,
            putative [Ricinus communis] gi|223536311|gb|EEF37962.1|
            Plastid-specific 30S ribosomal protein 1, chloroplast
            precursor, putative [Ricinus communis]
          Length = 311

 Score =  392 bits (1006), Expect = e-106
 Identities = 203/279 (72%), Positives = 231/279 (82%), Gaps = 7/279 (2%)
 Frame = -3

Query: 1100 RNPSFSSSFTDLNSYTSATKKFLIPLP-----KTERNSSMKFRGTRMAWDGPLSSVKLIL 936
            R PSFS     L+S TS    FL PL      K   N   +    RM+W+GPLSSVKLI 
Sbjct: 42   RLPSFS-----LSSKTS----FLNPLKLGSNVKYFENKRGRRSAVRMSWEGPLSSVKLIT 92

Query: 935  QGKNLELSDNVKSHVEDKVGKAIQKHSHLVREVDVRLSVRGGEFGKGPKIRRCEVTLFTK 756
            QGKNLEL+D VK HVEDKVGKA+QKHSHLVREVDVRLSVRGGEFGKGPKIRRCEVTLFTK
Sbjct: 93   QGKNLELTDTVKKHVEDKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPKIRRCEVTLFTK 152

Query: 755  KHGVIRAEEDAETMYASIDSVSSIIQRKLRKIKEKDSDHGRHMKGFDRLKVRDP--EVLL 582
            KHGVIRAEEDAET+YASID VSSIIQRKLRKIKEK SDHGRHMKGF+RLKVR+P  E + 
Sbjct: 153  KHGVIRAEEDAETIYASIDLVSSIIQRKLRKIKEKVSDHGRHMKGFNRLKVREPVAEPVK 212

Query: 581  AENGSASVAQGEDEDDFMDEIVRTKYFDMPPLTVAEAIEQLENVDHDFYGFRNEDTGEVN 402
             +        G++++D++DE+VRTKYFDMPPLTV+EAIEQL+NVDHDFYGFRNE+TGE+N
Sbjct: 213  DDTDEVDGVLGDEDEDYIDEVVRTKYFDMPPLTVSEAIEQLKNVDHDFYGFRNEETGEIN 272

Query: 401  IVYKRRAGGYGLIIPKQNGKAEKLEPVVVEPARESSLTE 285
            I+YKR+AGGYG+IIPK+NGKAEKLEPVV+EPARE S+ E
Sbjct: 273  IIYKRKAGGYGIIIPKENGKAEKLEPVVIEPAREPSIAE 311


>ref|XP_003634154.1| PREDICTED: 30S ribosomal protein 1, chloroplastic-like [Vitis
            vinifera]
          Length = 298

 Score =  382 bits (982), Expect = e-104
 Identities = 196/268 (73%), Positives = 225/268 (83%), Gaps = 1/268 (0%)
 Frame = -3

Query: 1085 SSSFTDLNSYTSATK-KFLIPLPKTERNSSMKFRGTRMAWDGPLSSVKLILQGKNLELSD 909
            S S   L++ +S++    ++ L  T R +  K    RM+WDGPLSSVKLILQGKNLEL+D
Sbjct: 34   SKSLRSLSNLSSSSGGSSILKLNATTRQT--KPLAVRMSWDGPLSSVKLILQGKNLELTD 91

Query: 908  NVKSHVEDKVGKAIQKHSHLVREVDVRLSVRGGEFGKGPKIRRCEVTLFTKKHGVIRAEE 729
             V+SHVE+KVGKA+QKHSHLVREVDVRLS+RGGE GKGPKIRRCEVTLFTKKHGV+RAEE
Sbjct: 92   TVRSHVEEKVGKAVQKHSHLVREVDVRLSIRGGELGKGPKIRRCEVTLFTKKHGVVRAEE 151

Query: 728  DAETMYASIDSVSSIIQRKLRKIKEKDSDHGRHMKGFDRLKVRDPEVLLAENGSASVAQG 549
             AET+Y SID VSSIIQRKLRKIKEKDSDHGRHMKGF+RLKVRDPE  L E  +  V Q 
Sbjct: 152  HAETLYGSIDMVSSIIQRKLRKIKEKDSDHGRHMKGFNRLKVRDPETPLVEEEADVVPQK 211

Query: 548  EDEDDFMDEIVRTKYFDMPPLTVAEAIEQLENVDHDFYGFRNEDTGEVNIVYKRRAGGYG 369
            ED  D ++EIVRTKYFDMPPLTV EA+EQLENVDHDF+GFRNE+TGE+NI+YKR+AGGYG
Sbjct: 212  ED-GDLINEIVRTKYFDMPPLTVPEAVEQLENVDHDFFGFRNEETGEINILYKRKAGGYG 270

Query: 368  LIIPKQNGKAEKLEPVVVEPARESSLTE 285
            LIIPK+NGK E+LEPVVV+  RE SL E
Sbjct: 271  LIIPKENGKTEELEPVVVKSDREPSLAE 298


>emb|CBI23087.3| unnamed protein product [Vitis vinifera]
          Length = 230

 Score =  379 bits (974), Expect = e-103
 Identities = 187/231 (80%), Positives = 208/231 (90%)
 Frame = -3

Query: 977 MAWDGPLSSVKLILQGKNLELSDNVKSHVEDKVGKAIQKHSHLVREVDVRLSVRGGEFGK 798
           M+WDGPLSSVKLILQGKNLEL+D V+SHVE+KVGKA+QKHSHLVREVDVRLS+RGGE GK
Sbjct: 1   MSWDGPLSSVKLILQGKNLELTDTVRSHVEEKVGKAVQKHSHLVREVDVRLSIRGGELGK 60

Query: 797 GPKIRRCEVTLFTKKHGVIRAEEDAETMYASIDSVSSIIQRKLRKIKEKDSDHGRHMKGF 618
           GPKIRRCEVTLFTKKHGV+RAEE AET+Y SID VSSIIQRKLRKIKEKDSDHGRHMKGF
Sbjct: 61  GPKIRRCEVTLFTKKHGVVRAEEHAETLYGSIDMVSSIIQRKLRKIKEKDSDHGRHMKGF 120

Query: 617 DRLKVRDPEVLLAENGSASVAQGEDEDDFMDEIVRTKYFDMPPLTVAEAIEQLENVDHDF 438
           +RLKVRDPE  L E  +  V Q ED  D ++EIVRTKYFDMPPLTV EA+EQLENVDHDF
Sbjct: 121 NRLKVRDPETPLVEEEADVVPQKED-GDLINEIVRTKYFDMPPLTVPEAVEQLENVDHDF 179

Query: 437 YGFRNEDTGEVNIVYKRRAGGYGLIIPKQNGKAEKLEPVVVEPARESSLTE 285
           +GFRNE+TGE+NI+YKR+AGGYGLIIPK+NGK E+LEPVVV+  RE SL E
Sbjct: 180 FGFRNEETGEINILYKRKAGGYGLIIPKENGKTEELEPVVVKSDREPSLAE 230


>ref|XP_002317839.1| predicted protein [Populus trichocarpa] gi|222858512|gb|EEE96059.1|
           predicted protein [Populus trichocarpa]
          Length = 306

 Score =  377 bits (969), Expect = e-102
 Identities = 185/232 (79%), Positives = 211/232 (90%)
 Frame = -3

Query: 980 RMAWDGPLSSVKLILQGKNLELSDNVKSHVEDKVGKAIQKHSHLVREVDVRLSVRGGEFG 801
           +M+WDGPL SVKLI+QGKNLEL+D VK HVEDKVGKA+QKHSHLVREVDVRLSVRGGE G
Sbjct: 76  KMSWDGPLHSVKLIIQGKNLELTDTVKRHVEDKVGKAVQKHSHLVREVDVRLSVRGGELG 135

Query: 800 KGPKIRRCEVTLFTKKHGVIRAEEDAETMYASIDSVSSIIQRKLRKIKEKDSDHGRHMKG 621
           KGP+IRRCEVTLFT +HGV+RAEEDAET+YASID VSSIIQRKLRKIKEK+SDHGRHMKG
Sbjct: 136 KGPRIRRCEVTLFTNRHGVVRAEEDAETIYASIDLVSSIIQRKLRKIKEKESDHGRHMKG 195

Query: 620 FDRLKVRDPEVLLAENGSASVAQGEDEDDFMDEIVRTKYFDMPPLTVAEAIEQLENVDHD 441
           F+RLKVR+P   + E  +  V+Q E ED  ++E+VRTK+FDMPPLTV+EAIEQLENVDHD
Sbjct: 196 FNRLKVREPVPQVVEGDADEVSQQEVEDS-IEEVVRTKFFDMPPLTVSEAIEQLENVDHD 254

Query: 440 FYGFRNEDTGEVNIVYKRRAGGYGLIIPKQNGKAEKLEPVVVEPARESSLTE 285
           FYGFRNE+TGE+NIVYKR+AGGYGLIIPK N +AE+LEP+VVEPARESSL E
Sbjct: 255 FYGFRNEETGEINIVYKRKAGGYGLIIPKGNDEAERLEPLVVEPARESSLAE 306


>ref|XP_004147328.1| PREDICTED: ribosome-binding factor PSRP1, chloroplastic-like [Cucumis
            sativus]
          Length = 310

 Score =  373 bits (958), Expect = e-101
 Identities = 188/264 (71%), Positives = 221/264 (83%), Gaps = 1/264 (0%)
 Frame = -3

Query: 1073 TDLNSYTSATKKF-LIPLPKTERNSSMKFRGTRMAWDGPLSSVKLILQGKNLELSDNVKS 897
            ++ +++ ++ K F  I      R++S  F   RM WDGPLSSVKLI+QGKNLEL++ VK 
Sbjct: 49   SNASAFFNSCKNFGTIETASRNRHASNSF-SIRMTWDGPLSSVKLIVQGKNLELTEAVKK 107

Query: 896  HVEDKVGKAIQKHSHLVREVDVRLSVRGGEFGKGPKIRRCEVTLFTKKHGVIRAEEDAET 717
            HVE+KVGKA+QKHSHLVREVDVRLSVRGGEFGKGP+IRRCEVTLFTKKHGV+RAEEDAET
Sbjct: 108  HVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAET 167

Query: 716  MYASIDSVSSIIQRKLRKIKEKDSDHGRHMKGFDRLKVRDPEVLLAENGSASVAQGEDED 537
            ++ASID VSSIIQRKLRKIKEKDSD GRH+KGFDR KVR+P  ++ E+    V Q ED  
Sbjct: 168  VFASIDLVSSIIQRKLRKIKEKDSDRGRHVKGFDRSKVREPAPIVVEDEEEEVFQ-EDGG 226

Query: 536  DFMDEIVRTKYFDMPPLTVAEAIEQLENVDHDFYGFRNEDTGEVNIVYKRRAGGYGLIIP 357
            + +DEIVRTKYFDMPPLTV EAIEQL+N+DHDFYGFRNE+TGE+NI+YKR+ GGYGLIIP
Sbjct: 227  EVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIP 286

Query: 356  KQNGKAEKLEPVVVEPARESSLTE 285
            K+NG AEKLEPV +E  RE SL E
Sbjct: 287  KENGTAEKLEPVTIEATREPSLAE 310