BLASTX nr result

ID: Panax21_contig00016090 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00016090
         (561 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634689.1| PREDICTED: cyclic nucleotide-gated ion chann...   210   1e-52
ref|XP_002330420.1| predicted protein [Populus trichocarpa] gi|2...   197   7e-49
ref|XP_002525760.1| Cyclic nucleotide-gated ion channel, putativ...   196   2e-48
ref|XP_003526201.1| PREDICTED: cyclic nucleotide-gated ion chann...   180   1e-43
ref|XP_003539580.1| PREDICTED: cyclic nucleotide-gated ion chann...   179   3e-43

>ref|XP_003634689.1| PREDICTED: cyclic nucleotide-gated ion channel 4-like [Vitis
           vinifera]
          Length = 667

 Score =  210 bits (534), Expect = 1e-52
 Identities = 101/136 (74%), Positives = 112/136 (82%)
 Frame = -1

Query: 408 GRSTCGPRGKLWFLGKVLDPRASWIQEWNRVFLLVCATGLFVDPLFFYALSISESCMCLF 229
           GR + G + K   L +VLDPRA W+QEWNRVFLLVCATGLFVDPLFFY LSI+ +CMCLF
Sbjct: 42  GRCSSGLKPKC--LSRVLDPRAKWVQEWNRVFLLVCATGLFVDPLFFYVLSINSTCMCLF 99

Query: 228 VDGWFAITVTVLRSMTDALHVWNMWLQFKINKRPHAVNADERSRLHDTCSRTVALRYLKA 49
           VDGWFAITVT LR MTDALH+WNMWLQ K+ KR   V  +E SRLHD  + TVALRYLKA
Sbjct: 100 VDGWFAITVTALRCMTDALHLWNMWLQLKMAKRTFHVVGEEGSRLHDASASTVALRYLKA 159

Query: 48  KKGFFFDLFVILPIPQ 1
           KKGFFFDLFVILP+PQ
Sbjct: 160 KKGFFFDLFVILPLPQ 175


>ref|XP_002330420.1| predicted protein [Populus trichocarpa] gi|222871805|gb|EEF08936.1|
           predicted protein [Populus trichocarpa]
          Length = 635

 Score =  197 bits (502), Expect = 7e-49
 Identities = 98/137 (71%), Positives = 108/137 (78%), Gaps = 6/137 (4%)
 Frame = -1

Query: 393 GPRGKLWFLGKVLDPRASWIQEWNRVFLLVCATGLFVDPLFFYALSISESCMCLFVDGWF 214
           G + + W LG+VLDPR  W+QEWNRVFLLVCATGLFVDPLFFY LSIS++CMCLFVDGWF
Sbjct: 9   GSKRRGWSLGQVLDPRGKWVQEWNRVFLLVCATGLFVDPLFFYVLSISDTCMCLFVDGWF 68

Query: 213 AITVTVLRSMTDALHVWNMWLQFKINKRPHAVNAD----ER--SRLHDTCSRTVALRYLK 52
           AITVT LR MTD L++WNMWLQ KI KRPH         ER  SR+   CS   ALRYLK
Sbjct: 69  AITVTALRCMTDVLYLWNMWLQLKIAKRPHGGGESGGDGERGGSRVAGPCSS--ALRYLK 126

Query: 51  AKKGFFFDLFVILPIPQ 1
           AKKGFFFDLFVILP+PQ
Sbjct: 127 AKKGFFFDLFVILPLPQ 143


>ref|XP_002525760.1| Cyclic nucleotide-gated ion channel, putative [Ricinus communis]
           gi|223534910|gb|EEF36596.1| Cyclic nucleotide-gated ion
           channel, putative [Ricinus communis]
          Length = 687

 Score =  196 bits (499), Expect = 2e-48
 Identities = 93/130 (71%), Positives = 107/130 (82%), Gaps = 5/130 (3%)
 Frame = -1

Query: 375 WFLGKVLDPRASWIQEWNRVFLLVCATGLFVDPLFFYALSISESCMCLFVDGWFAITVTV 196
           W LG+VLDPRA W+QEWNR FLLVCATGLFVDPLFFYALS+S++CMCLF+DGWFA+TVT 
Sbjct: 66  WSLGQVLDPRAKWVQEWNRGFLLVCATGLFVDPLFFYALSVSDTCMCLFIDGWFALTVTA 125

Query: 195 LRSMTDALHVWNMWLQFKINKRPH---AVNAD--ERSRLHDTCSRTVALRYLKAKKGFFF 31
           LR MTDALHVWNMWLQ K+ K+P     +  D  +RS    +   +VALRYLKAKKGFFF
Sbjct: 126 LRCMTDALHVWNMWLQLKMAKKPSIGGGIGGDYGDRSGPRFSSPSSVALRYLKAKKGFFF 185

Query: 30  DLFVILPIPQ 1
           DLFVILP+PQ
Sbjct: 186 DLFVILPLPQ 195


>ref|XP_003526201.1| PREDICTED: cyclic nucleotide-gated ion channel 4-like [Glycine max]
          Length = 691

 Score =  180 bits (457), Expect = 1e-43
 Identities = 87/133 (65%), Positives = 102/133 (76%), Gaps = 10/133 (7%)
 Frame = -1

Query: 369 LGKVLDPRASWIQEWNRVFLLVCATGLFVDPLFFYALSISESCMCLFVDGWFAITVTVLR 190
           LG+VLDPRA W+QEWNRVFLLVCA GLFVDPLFFYALS+S+SCMC+FVDGW A+TVTVLR
Sbjct: 66  LGRVLDPRAKWVQEWNRVFLLVCAAGLFVDPLFFYALSVSDSCMCVFVDGWLAVTVTVLR 125

Query: 189 SMTDALHVWNMWLQFKINKRPHAVNADERSR----------LHDTCSRTVALRYLKAKKG 40
            MTDALHVWNM ++ K+ KR   + A   S           L DT  R+VA+ YL ++ G
Sbjct: 126 CMTDALHVWNMVIRCKMAKRTFGLGASTTSSGRGTSSSSVGLRDTRPRSVAMGYLMSRTG 185

Query: 39  FFFDLFVILPIPQ 1
           FFFDLFVILP+PQ
Sbjct: 186 FFFDLFVILPLPQ 198


>ref|XP_003539580.1| PREDICTED: cyclic nucleotide-gated ion channel 4-like [Glycine max]
          Length = 683

 Score =  179 bits (454), Expect = 3e-43
 Identities = 89/122 (72%), Positives = 97/122 (79%), Gaps = 2/122 (1%)
 Frame = -1

Query: 360 VLDPRASWIQEWNRVFLLVCATGLFVDPLFFYALSISESCMCLFVDGWFAITVTVLRSMT 181
           VLDPR  W+QEWNRVFLLVCATGLFVDPLFFYALSIS++CMCLFVDGW  ITVT LR MT
Sbjct: 70  VLDPRGKWVQEWNRVFLLVCATGLFVDPLFFYALSISDTCMCLFVDGWLVITVTALRCMT 129

Query: 180 DALHVWNMWLQFKINKRPHA-VNAD-ERSRLHDTCSRTVALRYLKAKKGFFFDLFVILPI 7
           DALHVWNMWL+FK+ KR  + +  D   S          ALRYLKAK+GFFFDLFVILPI
Sbjct: 130 DALHVWNMWLEFKMAKRSSSFIGRDTNASGGGGGGGGGYALRYLKAKRGFFFDLFVILPI 189

Query: 6   PQ 1
           PQ
Sbjct: 190 PQ 191


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