BLASTX nr result

ID: Panax21_contig00016063 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00016063
         (816 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_566396.1| NDR1/HIN1-Like protein 1 [Arabidopsis thaliana]...   219   6e-55
gb|AAO41900.1| putative VAMP protein SEC22 [Arabidopsis thaliana]     218   1e-54
gb|AFK48051.1| unknown [Medicago truncatula]                          218   1e-54
ref|XP_002884856.1| predicted protein [Arabidopsis lyrata subsp....   217   2e-54
ref|XP_002322794.1| predicted protein [Populus trichocarpa] gi|2...   213   5e-53

>ref|NP_566396.1| NDR1/HIN1-Like protein 1 [Arabidopsis thaliana]
           gi|6041819|gb|AAF02134.1|AC009918_6 unknown protein
           [Arabidopsis thaliana]
           gi|9502172|gb|AAF88021.1|AF264697_1 NDR1/HIN1-Like
           protein 1 [Arabidopsis thaliana]
           gi|21595601|gb|AAM66116.1| harpin-induced protein-like
           [Arabidopsis thaliana] gi|56381911|gb|AAV85674.1|
           At3g11660 [Arabidopsis thaliana]
           gi|58331799|gb|AAW70397.1| At3g11660 [Arabidopsis
           thaliana] gi|332641559|gb|AEE75080.1| NDR1/HIN1-Like
           protein 1 [Arabidopsis thaliana]
          Length = 209

 Score =  219 bits (558), Expect = 6e-55
 Identities = 98/151 (64%), Positives = 128/151 (84%), Gaps = 2/151 (1%)
 Frame = +1

Query: 1   YAFNLTSFP-NLITSNFQVTISSRNPNRRIGIYYDKLDTYASYRSQQITYYTAIPPTYQG 177
           YAFN++  P NL+TSNFQ+T+SSRNPN +IGIYYD+LD YA+YRSQQIT+ T+IPPTYQG
Sbjct: 55  YAFNVSGNPPNLLTSNFQITLSSRNPNNKIGIYYDRLDVYATYRSQQITFPTSIPPTYQG 114

Query: 178 HKDVNVWSPFVTGTNVPVAPYNGVALSQDQEAGAIWVLIKINGRVRWKVGSVITGRYHLH 357
           HKDV++WSPFV GT+VP+AP+NGV+L  D++ G + ++I+ +GRVRWKVG+ ITG+YHLH
Sbjct: 115 HKDVDIWSPFVYGTSVPIAPFNGVSLDTDKDNGVVLLIIRADGRVRWKVGTFITGKYHLH 174

Query: 358 VTCPAYIPFGNRDKGIAVG-SAIKYQLSTRC 447
           V CPAYI FGN+  G+ VG +A+KY  +T C
Sbjct: 175 VKCPAYINFGNKANGVIVGDNAVKYTFTTSC 205


>gb|AAO41900.1| putative VAMP protein SEC22 [Arabidopsis thaliana]
          Length = 209

 Score =  218 bits (556), Expect = 1e-54
 Identities = 97/151 (64%), Positives = 128/151 (84%), Gaps = 2/151 (1%)
 Frame = +1

Query: 1   YAFNLTSFP-NLITSNFQVTISSRNPNRRIGIYYDKLDTYASYRSQQITYYTAIPPTYQG 177
           YAFN++  P N++TSNFQ+T+SSRNPN +IGIYYD+LD YA+YRSQQIT+ T+IPPTYQG
Sbjct: 55  YAFNVSGNPPNILTSNFQITLSSRNPNNKIGIYYDRLDVYATYRSQQITFPTSIPPTYQG 114

Query: 178 HKDVNVWSPFVTGTNVPVAPYNGVALSQDQEAGAIWVLIKINGRVRWKVGSVITGRYHLH 357
           HKDV++WSPFV GT+VP+AP+NGV+L  D++ G + ++I+ +GRVRWKVG+ ITG+YHLH
Sbjct: 115 HKDVDIWSPFVYGTSVPIAPFNGVSLDTDKDNGVVLLIIRADGRVRWKVGTFITGKYHLH 174

Query: 358 VTCPAYIPFGNRDKGIAVG-SAIKYQLSTRC 447
           V CPAYI FGN+  G+ VG +A+KY  +T C
Sbjct: 175 VKCPAYINFGNKANGVIVGDNAVKYTFTTSC 205


>gb|AFK48051.1| unknown [Medicago truncatula]
          Length = 210

 Score =  218 bits (555), Expect = 1e-54
 Identities = 103/151 (68%), Positives = 124/151 (82%), Gaps = 2/151 (1%)
 Frame = +1

Query: 1   YAFNLTSFPNLITSNFQVTISSRNPNRRIGIYYDKLDTYASYRSQQITYYTAIPPTYQGH 180
           YAFN T  PN +TSNFQVT+SSRNPN +IGIYYD+LD+Y +YRSQQITY TAIPP+YQ H
Sbjct: 57  YAFNAT-VPNFLTSNFQVTVSSRNPNDKIGIYYDRLDSYVTYRSQQITYRTAIPPSYQEH 115

Query: 181 KDVNVWSPFVTGTNVPVAPYNGVALSQDQEAGAIWVLIKINGRVRWKVGSVITGRYHLHV 360
           K+V+VWSPFV GTNVPVAPYN VALSQDQ+ G + V++K +GRVRWKVG+ I+G YH+ V
Sbjct: 116 KEVDVWSPFVYGTNVPVAPYNSVALSQDQDNGNVLVVVKFDGRVRWKVGAFISGHYHIFV 175

Query: 361 TCPAYIPFGNRDKGIAVG--SAIKYQLSTRC 447
            CPA+I FG R  GI+VG   A+KYQ+  RC
Sbjct: 176 RCPAFITFGPRSNGISVGDSGAVKYQIVQRC 206


>ref|XP_002884856.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297330696|gb|EFH61115.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 202

 Score =  217 bits (553), Expect = 2e-54
 Identities = 97/151 (64%), Positives = 128/151 (84%), Gaps = 2/151 (1%)
 Frame = +1

Query: 1   YAFNLTSFP-NLITSNFQVTISSRNPNRRIGIYYDKLDTYASYRSQQITYYTAIPPTYQG 177
           YAFN++  P NLITSNFQ+T+SSRNPN +IG+YYD+LD YA+YRSQQIT+ T+IPPTYQG
Sbjct: 48  YAFNVSGNPPNLITSNFQITLSSRNPNDKIGVYYDRLDVYATYRSQQITFRTSIPPTYQG 107

Query: 178 HKDVNVWSPFVTGTNVPVAPYNGVALSQDQEAGAIWVLIKINGRVRWKVGSVITGRYHLH 357
           HK+VN+WSPFV GT+VP+AP+NGV L  D++ GAI ++I+ +GRVRWKVG+ ITG+YHL+
Sbjct: 108 HKEVNIWSPFVYGTSVPIAPFNGVGLDDDKDNGAIMLIIRADGRVRWKVGTFITGKYHLY 167

Query: 358 VTCPAYIPFGNRDKGIAVG-SAIKYQLSTRC 447
           V CPAYI FGN+  G+ +G +A+KY  ++ C
Sbjct: 168 VKCPAYINFGNKAAGVIIGDNAVKYTFTSSC 198


>ref|XP_002322794.1| predicted protein [Populus trichocarpa] gi|222867424|gb|EEF04555.1|
           predicted protein [Populus trichocarpa]
          Length = 209

 Score =  213 bits (541), Expect = 5e-53
 Identities = 100/150 (66%), Positives = 128/150 (85%), Gaps = 1/150 (0%)
 Frame = +1

Query: 1   YAFNLTSFPNLITSNFQVTISSRNPNRRIGIYYDKLDTYASYRSQQITYYTAIPPTYQGH 180
           YAFN++S PN++TSNFQVT+SSRNPN ++GIYYDKLD YA+YR+QQIT  T+IP +YQGH
Sbjct: 57  YAFNVSS-PNVLTSNFQVTLSSRNPNDKVGIYYDKLDVYATYRNQQITLRTSIPTSYQGH 115

Query: 181 KDVNVWSPFVTGTNVPVAPYNGVALSQDQEAGAIWVLIKINGRVRWKVGSVITGRYHLHV 360
           K+++VWSPF+ G+ VPV+PYN VALSQDQ  G + ++IKI+GRVR+KVG+ I+ +YHL+V
Sbjct: 116 KEIDVWSPFIYGSAVPVSPYNSVALSQDQATGTVLLMIKIDGRVRFKVGTFISAKYHLNV 175

Query: 361 TCPAYIPFGNRDKGIAVG-SAIKYQLSTRC 447
            CPAYI FG+R  GI VG +AIKYQL TRC
Sbjct: 176 RCPAYIQFGSRTSGIIVGENAIKYQLVTRC 205


Top