BLASTX nr result

ID: Panax21_contig00016057 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00016057
         (508 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN81846.1| hypothetical protein VITISV_037892 [Vitis vinifera]    62   5e-08
ref|XP_004138258.1| PREDICTED: putative FBD-associated F-box pro...    58   7e-07
ref|XP_003577168.1| PREDICTED: LOW QUALITY PROTEIN: putative F-b...    57   2e-06
ref|XP_002513467.1| ubiquitin-protein ligase, putative [Ricinus ...    55   6e-06

>emb|CAN81846.1| hypothetical protein VITISV_037892 [Vitis vinifera]
          Length = 265

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 32/81 (39%), Positives = 51/81 (62%)
 Frame = +2

Query: 11  HQHLKLVEMYGYYGRTSDVELAEYFIQNAVALKRIVIDPRNQILERTPVGNEKIKREEAA 190
           HQ+LK+VE+ GY   + D EL +  I+N V L++I+ID  +   +   +   + + +   
Sbjct: 187 HQYLKVVEIEGYCNYSYDFELFKQIIENVVTLEKIIIDTHDP--QSVKLQASRSRAKTGR 244

Query: 191 RSRAKQQLETKKPPGVQLVIL 253
           RSRAKQ L T+ PPGV+L++L
Sbjct: 245 RSRAKQLLTTQVPPGVELIVL 265


>ref|XP_004138258.1| PREDICTED: putative FBD-associated F-box protein At5g56700-like
           [Cucumis sativus] gi|449501454|ref|XP_004161371.1|
           PREDICTED: putative FBD-associated F-box protein
           At5g56700-like [Cucumis sativus]
          Length = 475

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 31/84 (36%), Positives = 49/84 (58%)
 Frame = +2

Query: 2   KFPHQHLKLVEMYGYYGRTSDVELAEYFIQNAVALKRIVIDPRNQILERTPVGNEKIKRE 181
           KFPHQ++K+VE+ G+ G+  D+EL +YF +NAVAL+ I+ D R    +   +  +K   E
Sbjct: 393 KFPHQYIKVVELAGFVGKPIDLELVQYFHKNAVALEEIIFDTRKP-KDMGTIFEKKQNAE 451

Query: 182 EAARSRAKQQLETKKPPGVQLVIL 253
             A       L +K   GV++ I+
Sbjct: 452 TIAGRECANGLRSKLFSGVKVTII 475


>ref|XP_003577168.1| PREDICTED: LOW QUALITY PROTEIN: putative F-box/LRR-repeat protein
           At5g54820-like [Brachypodium distachyon]
          Length = 449

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 30/68 (44%), Positives = 42/68 (61%)
 Frame = +2

Query: 8   PHQHLKLVEMYGYYGRTSDVELAEYFIQNAVALKRIVIDPRNQILERTPVGNEKIKREEA 187
           PH HLK   M G+ G    +ELA+Y ++NAV L+R+ IDPRN +  R+ +GNE   R  A
Sbjct: 374 PHYHLKTACMTGFRGNRGQIELAKYIMRNAVELERMTIDPRNIMFGRS-IGNEFDGRMYA 432

Query: 188 ARSRAKQQ 211
            R  A+ +
Sbjct: 433 KRELARSE 440


>ref|XP_002513467.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223547375|gb|EEF48870.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 464

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 34/84 (40%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
 Frame = +2

Query: 11  HQHLKLVEMYGYYGRTSDVELAEYFIQNAVALKRIVIDPRNQILERTPVGNEKIKREEAA 190
           H  LK+VE+ G+ G  ++VEL  YF++NA  LK ++I P      R+P    K K  E  
Sbjct: 383 HPCLKVVEVLGFQGNAAEVELVLYFLRNAAVLKNLIISPCAPCYLRSP-SQLKFKETELY 441

Query: 191 RSRAKQ---QLETKKPPGVQLVIL 253
           +S AKQ   +L  + PPGV  V+L
Sbjct: 442 QS-AKQHAVELGARVPPGVDFVVL 464


Top